BLASTX nr result

ID: Glycyrrhiza24_contig00000875 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000875
         (1852 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539477.1| PREDICTED: F-box protein At2g27310-like [Gly...   398   e-108
ref|XP_003541964.1| PREDICTED: F-box protein At2g27310-like [Gly...   392   e-106
gb|AFK33432.1| unknown [Medicago truncatula]                          349   1e-93
ref|XP_003596861.1| F-box family protein [Medicago truncatula] g...   348   2e-93
ref|XP_003538103.1| PREDICTED: F-box protein At2g27310-like [Gly...   314   4e-83

>ref|XP_003539477.1| PREDICTED: F-box protein At2g27310-like [Glycine max]
          Length = 362

 Score =  398 bits (1023), Expect = e-108
 Identities = 196/298 (65%), Positives = 229/298 (76%), Gaps = 6/298 (2%)
 Frame = +2

Query: 470  ITTVHPDIIQSHILTRLDGXXXXXXXXXXXXXXXXCTEHHLWHNICAATWPSLNDPIATA 649
            ITTVHPDI QSHIL RLDG                CTEHHLW NICAATWPSLNDP+A A
Sbjct: 45   ITTVHPDIFQSHILNRLDGPTLASAASATSHLRGLCTEHHLWRNICAATWPSLNDPLAAA 104

Query: 650  LISTFPATHRSVXXXXXXXXXXXXXXXXHR---TPPPEELISAVDIYYEGKPVFSKVLRT 820
             I+TFPATHRS+                     TPPP ELISAVDIYY+GKPVFS+V+RT
Sbjct: 105  TIATFPATHRSIFSDSFPSLHHSPPNPIPTQPPTPPPPELISAVDIYYKGKPVFSRVIRT 164

Query: 821  KTHKGWFLCSPLWIDLLEPDELVPTPVKLAQNDDVLE---HLEENLGLSWIIIDPTRKRS 991
            +THKGWFLCSPLW+DLL+P E+VPTP+K AQ +D +E   HL ENL LSWIIIDPTRKR+
Sbjct: 165  ETHKGWFLCSPLWVDLLDPTEVVPTPLKFAQTNDEIELLNHLVENLALSWIIIDPTRKRA 224

Query: 992  ANLSSRLPVAVQRHWLTGDLEVLFSVVLLGAVQCTIKVTCCGKAGGEMHVREVSLSMEDT 1171
            ANLSSR PV+ +RHWLT +LEVL++V +   VQC +KVTCCGK GG MHVREVSL+MEDT
Sbjct: 225  ANLSSRRPVSARRHWLTAELEVLYAVPM-ETVQCVVKVTCCGKVGGAMHVREVSLTMEDT 283

Query: 1172 EGRHVMGRESMVILQGAMENGERKRVDGEEAKASFERFSLVKREKREGKMRRDKALDM 1345
            EGRHVMGR+ +VILQ AMENG+R+++D E+AK  FE+FS+VKRE RE KMRRD+A+DM
Sbjct: 284  EGRHVMGRDGVVILQDAMENGKREKLDAEKAKERFEKFSIVKREIRERKMRRDRAMDM 341


>ref|XP_003541964.1| PREDICTED: F-box protein At2g27310-like [Glycine max]
          Length = 326

 Score =  392 bits (1006), Expect = e-106
 Identities = 194/297 (65%), Positives = 230/297 (77%), Gaps = 5/297 (1%)
 Frame = +2

Query: 470  ITTVHPDIIQSHILTRLDGXXXXXXXXXXXXXXXXCTEHHLWHNICAATWPSLNDPIATA 649
            ITTVHPDI QSHIL RLDG                CTEHHLW NI AATWPSLNDP+A A
Sbjct: 10   ITTVHPDIFQSHILNRLDGPTLASAASSTSHLRRLCTEHHLWRNISAATWPSLNDPLAAA 69

Query: 650  LISTFPATHRSVXXXXXXXXXXXXXXXXHRTPPPE--ELISAVDIYYEGKPVFSKVLRTK 823
            +I+TFPA HRS+                   PPP   ELISAVD+YY+GKPVFS+V++T+
Sbjct: 70   IITTFPARHRSIFSDSFPSLHHSPPNLNPTPPPPPPPELISAVDLYYKGKPVFSRVIKTE 129

Query: 824  THKGWFLCSPLWIDLLEPDELVPTPVKLAQNDD---VLEHLEENLGLSWIIIDPTRKRSA 994
            THKGWFLCSPLW+DLL+ +E+VPTP+K AQ +D   +L HL+ENL LSWIIIDPTRKR+A
Sbjct: 130  THKGWFLCSPLWVDLLDRNEVVPTPLKFAQTNDENKLLNHLDENLTLSWIIIDPTRKRAA 189

Query: 995  NLSSRLPVAVQRHWLTGDLEVLFSVVLLGAVQCTIKVTCCGKAGGEMHVREVSLSMEDTE 1174
            NLSSR PVAV+RHWLT +L+VL++V +   VQC +KVTCCGKAGG MHVREVSL+MEDTE
Sbjct: 190  NLSSRRPVAVRRHWLTAELQVLYAVPM-ETVQCVVKVTCCGKAGGAMHVREVSLTMEDTE 248

Query: 1175 GRHVMGRESMVILQGAMENGERKRVDGEEAKASFERFSLVKREKREGKMRRDKALDM 1345
            GRHVMG++S+VILQ AMENG+RK++D  EAK  FE+FS+VKRE RE KMRRDKA+DM
Sbjct: 249  GRHVMGKDSVVILQDAMENGKRKKLDEVEAKERFEKFSIVKREIRERKMRRDKAMDM 305


>gb|AFK33432.1| unknown [Medicago truncatula]
          Length = 321

 Score =  349 bits (896), Expect = 1e-93
 Identities = 173/298 (58%), Positives = 216/298 (72%), Gaps = 6/298 (2%)
 Frame = +2

Query: 470  ITTVHPDIIQSHILTRLDGXXXXXXXXXXXXXXXXCTEHHLWHNICAATWPSLNDPIATA 649
            ITT+HP I+QSHIL+RLDG                CTEHHLW  I  +TWPSLN+P AT+
Sbjct: 5    ITTIHPYILQSHILSRLDGTSLTSVSSTATHLHNLCTEHHLWQKIITSTWPSLNNPSATS 64

Query: 650  LISTFPATHRSVXXXXXXXXXXXXXXXXHRTPP------PEELISAVDIYYEGKPVFSKV 811
            LISTFP++HRS+                  +        P+EL SAVD+YY+G+PVFSK+
Sbjct: 65   LISTFPSSHRSIFSDSFPSIHYSSSSSDTSSSSSLALSAPKELFSAVDLYYKGRPVFSKL 124

Query: 812  LRTKTHKGWFLCSPLWIDLLEPDELVPTPVKLAQNDDVLEHLEENLGLSWIIIDPTRKRS 991
            LRT+THKGWFLCSPLWI++LEP+E++ T +K  QND V+E LE+NL LSWIII+PTRKRS
Sbjct: 125  LRTETHKGWFLCSPLWIEILEPNEIIETNIKFEQND-VVEWLEQNLSLSWIIIEPTRKRS 183

Query: 992  ANLSSRLPVAVQRHWLTGDLEVLFSVVLLGAVQCTIKVTCCGKAGGEMHVREVSLSMEDT 1171
             NLS+RLPV V+RHWLTG+LEVL+  V+ G VQC +KVTCCGK GGEMHV  VS SMED 
Sbjct: 184  VNLSNRLPVTVRRHWLTGELEVLYGTVM-GMVQCMVKVTCCGKVGGEMHVTGVSFSMEDI 242

Query: 1172 EGRHVMGRESMVILQGAMENGERKRVDGEEAKASFERFSLVKREKREGKMRRDKALDM 1345
            +GRH++GR+S+ IL GAME GER +VD +  K SFE F   KRE+RE K+RR++ +DM
Sbjct: 243  DGRHLIGRDSLGILVGAMEKGERWKVDIDREKKSFEEFCGRKRERREKKLRRERVMDM 300


>ref|XP_003596861.1| F-box family protein [Medicago truncatula]
            gi|355485909|gb|AES67112.1| F-box family protein
            [Medicago truncatula]
          Length = 321

 Score =  348 bits (894), Expect = 2e-93
 Identities = 173/298 (58%), Positives = 215/298 (72%), Gaps = 6/298 (2%)
 Frame = +2

Query: 470  ITTVHPDIIQSHILTRLDGXXXXXXXXXXXXXXXXCTEHHLWHNICAATWPSLNDPIATA 649
            ITT+HP I+QSHIL+RLDG                CTEHHLW  I  +TWPSLN+P AT+
Sbjct: 5    ITTIHPYILQSHILSRLDGTSLTSVSSTATHLHNLCTEHHLWQKIITSTWPSLNNPSATS 64

Query: 650  LISTFPATHRSVXXXXXXXXXXXXXXXXHRTPP------PEELISAVDIYYEGKPVFSKV 811
            LISTFP++HRS+                  +        P+EL SAVD+YY+G+PVFSK+
Sbjct: 65   LISTFPSSHRSIFSDSFPSIHYSSSSSDTSSSSSLALSAPKELFSAVDLYYKGRPVFSKL 124

Query: 812  LRTKTHKGWFLCSPLWIDLLEPDELVPTPVKLAQNDDVLEHLEENLGLSWIIIDPTRKRS 991
            LRT+THKGWFLCSPLWI++LEP+E++ T +K  QND V+E LE+NL LSWIII+PTRKRS
Sbjct: 125  LRTETHKGWFLCSPLWIEILEPNEIIETNIKFEQND-VVEWLEQNLSLSWIIIEPTRKRS 183

Query: 992  ANLSSRLPVAVQRHWLTGDLEVLFSVVLLGAVQCTIKVTCCGKAGGEMHVREVSLSMEDT 1171
             NLSSRLPV V+RHWLTG+LEVL+  V+ G VQC +KVTCCGK GGEMHV  VS SMED 
Sbjct: 184  VNLSSRLPVTVRRHWLTGELEVLYGTVM-GMVQCMVKVTCCGKVGGEMHVTGVSFSMEDM 242

Query: 1172 EGRHVMGRESMVILQGAMENGERKRVDGEEAKASFERFSLVKREKREGKMRRDKALDM 1345
            +GRH++GR+S+ IL GAME GER +VD +  K  FE F   KRE+RE K+RR++ +DM
Sbjct: 243  DGRHLIGRDSLGILVGAMEKGERWKVDIDREKKRFEEFCGRKRERREKKLRRERVMDM 300


>ref|XP_003538103.1| PREDICTED: F-box protein At2g27310-like [Glycine max]
          Length = 341

 Score =  314 bits (805), Expect = 4e-83
 Identities = 159/301 (52%), Positives = 200/301 (66%), Gaps = 8/301 (2%)
 Frame = +2

Query: 467  TITTVHPDIIQSHILTRLDGXXXXXXXXXXXXXXXXCTEHHLWHNICAATWPSLNDPIAT 646
            ++ T+H DII +HILTRLDG                CT+  LW  I  ATWPSL +PIA 
Sbjct: 22   SLATLHSDIIHAHILTRLDGATLASAASVSSLMHRLCTQDDLWREISTATWPSLQNPIAR 81

Query: 647  ALISTFPATHRSVXXXXXXXXXXXXXXXXHRTPPPEELISAVDIYYEGKPVFSKVLRTKT 826
             +IS  P  +RS+                   PP  ELISAVD+YY+GKPVFS+V+RT+T
Sbjct: 82   HVISAIPGGYRSIFSDAFPSLHNSSFRRHRPPPPTPELISAVDMYYQGKPVFSRVIRTET 141

Query: 827  HKGWFLCSPLWIDLLEPDELVPTPVKLAQNDDV-LEHLEENLGLSWIIIDPTRKRSANLS 1003
             K WF  SPLWID L+  EL+PT VK A+ D+  L+HLEENL +SWII+DPTRKR+AN+S
Sbjct: 142  QKNWFFASPLWIDALQHKELIPTTVKFARKDEEWLKHLEENLSVSWIIVDPTRKRAANVS 201

Query: 1004 SRLPVAVQRHWLTGDLEVLFSVVLLGA-------VQCTIKVTCCGKAGGEMHVREVSLSM 1162
            SR  V  QRHWLT ++EV+++  + G        VQC +KVTCCGK GGE+HVREV+L M
Sbjct: 202  SRRAVLAQRHWLTREVEVVYAAEMAGERGGATERVQCLVKVTCCGKVGGELHVREVNLVM 261

Query: 1163 EDTEGRHVMGRESMVILQGAMENGERKRVDGEEAKASFERFSLVKREKREGKMRRDKALD 1342
            EDTEGR V G+ES+ ILQ AMENGERKRVD    K  F +F+ + +E+RE K RR+KA D
Sbjct: 262  EDTEGRRVSGKESVEILQRAMENGERKRVDHVRDKDRFMKFTCLMKERRERKFRREKARD 321

Query: 1343 M 1345
            +
Sbjct: 322  L 322


Top