BLASTX nr result

ID: Glycyrrhiza24_contig00000852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000852
         (1884 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537351.1| PREDICTED: transcription factor RF2b-like [G...   452   e-124
ref|XP_003552912.1| PREDICTED: transcription factor RF2b-like [G...   444   e-122
ref|XP_003544931.1| PREDICTED: transcription factor RF2b [Glycin...   392   e-106
ref|XP_003616032.1| Transcription factor RF2b [Medicago truncatu...   375   e-101
ref|XP_004140027.1| PREDICTED: transcription factor RF2b-like [C...   364   5e-98

>ref|XP_003537351.1| PREDICTED: transcription factor RF2b-like [Glycine max]
          Length = 385

 Score =  452 bits (1162), Expect = e-124
 Identities = 253/385 (65%), Positives = 263/385 (68%), Gaps = 3/385 (0%)
 Frame = -1

Query: 1674 MATQMQDXXXXXXXXXXXXXXXXXXNLFIRGGG-NGASAAPFAGXXXXXXXXXXXXXS-- 1504
            MATQ QD                  + F R GG NGAS AP AG                
Sbjct: 1    MATQTQDPPSNPNPNPNATSATPSSSFFFRAGGANGASVAPVAGSGESHSHHRRAQSEVS 60

Query: 1503 YRXXXXXXXXXXXXXLNGGSSTASLEEIGSEDDLFSTYIDVEKLXXXXXXXXXXXXXXXX 1324
            +R              NGGSSTAS EEIGSEDDLFSTYIDVEKL                
Sbjct: 61   FRLPEDMMDLSPSDPFNGGSSTASFEEIGSEDDLFSTYIDVEKLSGGANGAGRGGNGSDQ 120

Query: 1323 XXXXXXXGTSGHNDGEKSPGAITPRTRHRHXXXXXXXXXXSMFGEIMDAKKAMPPDKLAE 1144
                   GTSGHNDGEKS  A   R RHRH           MFGEIMDAKKAMPPDKLAE
Sbjct: 121  SGYGNGAGTSGHNDGEKSSSAAAARPRHRHSSSVDGSTSTCMFGEIMDAKKAMPPDKLAE 180

Query: 1143 LWTIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTG 964
            LW IDPKRAKRILANRQSAARSKERKARYIQELE KVQTLQTEATTLSAQLTLYQRDTTG
Sbjct: 181  LWNIDPKRAKRILANRQSAARSKERKARYIQELEHKVQTLQTEATTLSAQLTLYQRDTTG 240

Query: 963  LSSENTELKLRLQAMEQQAQLRDALNDALMKEVERLKIATGEVMNPSESFNLGMHQMPFA 784
            LSSENTELKLRLQAMEQQAQLRDALNDALMKEVERLKIATGE +N SESFNLGMHQMP+A
Sbjct: 241  LSSENTELKLRLQAMEQQAQLRDALNDALMKEVERLKIATGEALNQSESFNLGMHQMPYA 300

Query: 783  GSNFFSFPPQSGPSGHHNIQLPPFGQPPSNMPTLQLQQTNSHQISDILHNDQLGRMQGLD 604
            G NFFS PP SGPSGH N+QLPPFG   S +PT QLQQTNSHQ+SDIL NDQLGR+QGLD
Sbjct: 301  GPNFFSIPPHSGPSGHQNMQLPPFGHSQSTVPTHQLQQTNSHQMSDILQNDQLGRLQGLD 360

Query: 603  ISSKGSTLVKXXXXXXXXXXXSTTF 529
            ISSKG+ +VK           STTF
Sbjct: 361  ISSKGTPMVKSEGPSISANESSTTF 385


>ref|XP_003552912.1| PREDICTED: transcription factor RF2b-like [Glycine max]
          Length = 380

 Score =  444 bits (1143), Expect = e-122
 Identities = 252/385 (65%), Positives = 264/385 (68%), Gaps = 3/385 (0%)
 Frame = -1

Query: 1674 MATQMQDXXXXXXXXXXXXXXXXXXNLFIRG-GGNGASAAPFAGXXXXXXXXXXXXXS-- 1504
            MATQ QD                  + FIR  GGNG SAAP AG                
Sbjct: 1    MATQTQDPRSNPNPNPNAMSATPSSSFFIRAAGGNGPSAAPVAGSGESHSHHRRAHSEVS 60

Query: 1503 YRXXXXXXXXXXXXXLNGGSSTASLEEIGSEDDLFSTYIDVEKLXXXXXXXXXXXXXXXX 1324
            +R              NGGSSTAS EEIGSEDDLFSTYIDVEKL                
Sbjct: 61   FRLPDDMIDLSPSDPFNGGSSTASFEEIGSEDDLFSTYIDVEKLGAGRGGNGSDQSGYGN 120

Query: 1323 XXXXXXXGTSGHNDGEKSPGAITPRTRHRHXXXXXXXXXXSMFGEIMDAKKAMPPDKLAE 1144
                    +S +NDGEKSP     R RHRH          SMFGEIMDAKKAMPPDKLAE
Sbjct: 121  GAG-----SSCYNDGEKSPSTAAARPRHRHSSSVDGSTSTSMFGEIMDAKKAMPPDKLAE 175

Query: 1143 LWTIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTG 964
            LW IDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTG
Sbjct: 176  LWNIDPKRAKRILANRQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTG 235

Query: 963  LSSENTELKLRLQAMEQQAQLRDALNDALMKEVERLKIATGEVMNPSESFNLGMHQMPFA 784
            LSSENTELKLRLQAMEQQAQLRD LNDALMKEVERLKIATGE +N SESFNLGMHQMP+A
Sbjct: 236  LSSENTELKLRLQAMEQQAQLRDVLNDALMKEVERLKIATGEALNQSESFNLGMHQMPYA 295

Query: 783  GSNFFSFPPQSGPSGHHNIQLPPFGQPPSNMPTLQLQQTNSHQISDILHNDQLGRMQGLD 604
            GSNFFS PP SGPSGH N+QLPPFG   S +PT QLQQTNSHQ+SDIL NDQLGR+QGLD
Sbjct: 296  GSNFFSIPPHSGPSGHQNMQLPPFGHSHSTVPTHQLQQTNSHQMSDILQNDQLGRLQGLD 355

Query: 603  ISSKGSTLVKXXXXXXXXXXXSTTF 529
            ISSKG+ +VK           STTF
Sbjct: 356  ISSKGTPVVKSEGPSISANESSTTF 380


>ref|XP_003544931.1| PREDICTED: transcription factor RF2b [Glycine max]
          Length = 362

 Score =  392 bits (1008), Expect = e-106
 Identities = 217/308 (70%), Positives = 233/308 (75%)
 Frame = -1

Query: 1452 GGSSTASLEEIGSEDDLFSTYIDVEKLXXXXXXXXXXXXXXXXXXXXXXXGTSGHNDGEK 1273
            GGSSTAS+EEIGSEDDLFSTYIDV+KL                       G     + EK
Sbjct: 78   GGSSTASMEEIGSEDDLFSTYIDVDKL------------GGANGSGASGNGADPTGETEK 125

Query: 1272 SPGAITPRTRHRHXXXXXXXXXXSMFGEIMDAKKAMPPDKLAELWTIDPKRAKRILANRQ 1093
            SP     R RHRH            FGEIMDAKKAMPPDKLAELWTIDPKRAKRILANRQ
Sbjct: 126  SPA----RPRHRHSSSVD-------FGEIMDAKKAMPPDKLAELWTIDPKRAKRILANRQ 174

Query: 1092 SAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSSENTELKLRLQAMEQ 913
            SAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLS+ENTELKLRLQAMEQ
Sbjct: 175  SAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSTENTELKLRLQAMEQ 234

Query: 912  QAQLRDALNDALMKEVERLKIATGEVMNPSESFNLGMHQMPFAGSNFFSFPPQSGPSGHH 733
            QAQLRDALN+AL KEVERLK+ATGE+M+ ++SFNLGMH MPF+GSNF   PPQSGPSGH 
Sbjct: 235  QAQLRDALNEALKKEVERLKVATGEMMSHTDSFNLGMHLMPFSGSNFVPIPPQSGPSGHQ 294

Query: 732  NIQLPPFGQPPSNMPTLQLQQTNSHQISDILHNDQLGRMQGLDISSKGSTLVKXXXXXXX 553
            N+Q+PPFG  PS MP+  L QT+SH  S+IL NDQLGR QGLDISSKGSTLVK       
Sbjct: 295  NMQMPPFGLTPSTMPSHLLHQTSSHPYSEILQNDQLGRFQGLDISSKGSTLVKSEGPSLS 354

Query: 552  XXXXSTTF 529
                STTF
Sbjct: 355  ASESSTTF 362


>ref|XP_003616032.1| Transcription factor RF2b [Medicago truncatula]
            gi|355517367|gb|AES98990.1| Transcription factor RF2b
            [Medicago truncatula]
          Length = 358

 Score =  375 bits (964), Expect = e-101
 Identities = 205/308 (66%), Positives = 231/308 (75%)
 Frame = -1

Query: 1452 GGSSTASLEEIGSEDDLFSTYIDVEKLXXXXXXXXXXXXXXXXXXXXXXXGTSGHNDGEK 1273
            GGSSTASL+EIGSEDDLFSTYID++KL                          G+++GEK
Sbjct: 77   GGSSTASLDEIGSEDDLFSTYIDMDKLGDGGADP------------------GGNDEGEK 118

Query: 1272 SPGAITPRTRHRHXXXXXXXXXXSMFGEIMDAKKAMPPDKLAELWTIDPKRAKRILANRQ 1093
            +P     R+RHRH            FGEIMD KKAMPPDKLAELW++DPKRAKRILANRQ
Sbjct: 119  NP----VRSRHRHSNSVDGSSS---FGEIMDGKKAMPPDKLAELWSVDPKRAKRILANRQ 171

Query: 1092 SAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSSENTELKLRLQAMEQ 913
            SAARSKERKARYI ELERKVQTLQTEATTLSAQLTLYQRDTTGLS+ENTELKLRLQAMEQ
Sbjct: 172  SAARSKERKARYIHELERKVQTLQTEATTLSAQLTLYQRDTTGLSTENTELKLRLQAMEQ 231

Query: 912  QAQLRDALNDALMKEVERLKIATGEVMNPSESFNLGMHQMPFAGSNFFSFPPQSGPSGHH 733
            QA LRDALNDAL KEVERLK+ATG++M+ +ESFNLGMHQM F  S++   PPQ GPSGH 
Sbjct: 232  QAHLRDALNDALKKEVERLKVATGDIMSHTESFNLGMHQMQFTESDYAPIPPQ-GPSGHR 290

Query: 732  NIQLPPFGQPPSNMPTLQLQQTNSHQISDILHNDQLGRMQGLDISSKGSTLVKXXXXXXX 553
            NI+LP FG  PS+MP+ QL QTNSH  S++L NDQ+GR QGLDISSKG+ +VK       
Sbjct: 291  NIRLPLFGHSPSSMPSHQLHQTNSHSYSELLQNDQIGRFQGLDISSKGTAVVKSEDPSLS 350

Query: 552  XXXXSTTF 529
                STTF
Sbjct: 351  ASESSTTF 358


>ref|XP_004140027.1| PREDICTED: transcription factor RF2b-like [Cucumis sativus]
          Length = 396

 Score =  364 bits (934), Expect = 5e-98
 Identities = 206/311 (66%), Positives = 229/311 (73%), Gaps = 2/311 (0%)
 Frame = -1

Query: 1455 NGGSSTASLEEIGSEDDLFSTYIDVEKLXXXXXXXXXXXXXXXXXXXXXXXGTSGHNDGE 1276
            NGGSSTASLEEIGSEDDLFSTYIDV+KL                         +  ++GE
Sbjct: 96   NGGSSTASLEEIGSEDDLFSTYIDVKKLGGNGGGNFVDHYGNGGCEGG-----AAGSEGE 150

Query: 1275 KSPGAITPRTRHRH-XXXXXXXXXXSMFGEIMDAKKAMPPDKLAELWTIDPKRAKRILAN 1099
            K     T + RHRH           SMFGEIM+AKKAMPPDKLAELW+ DPKRAKRILAN
Sbjct: 151  K-----TSKPRHRHSVSVDGTTSSSSMFGEIMEAKKAMPPDKLAELWSSDPKRAKRILAN 205

Query: 1098 RQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLYQRDTTGLSSENTELKLRLQAM 919
            RQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTL+QRDTTGLS+ENTELKLRLQAM
Sbjct: 206  RQSAARSKERKARYIQELERKVQTLQTEATTLSAQLTLFQRDTTGLSTENTELKLRLQAM 265

Query: 918  EQQAQLRDALNDALMKEVERLKIATGEVMNPSESFNLGMHQMPFAGSNFFSFPPQS-GPS 742
            EQQAQLRDALNDAL KEVERLKIATGE+M+PSESFNLGMH M +A S+F     Q  G +
Sbjct: 266  EQQAQLRDALNDALKKEVERLKIATGEMMSPSESFNLGMHHMAYAPSSFIQLSQQQPGST 325

Query: 741  GHHNIQLPPFGQPPSNMPTLQLQQTNSHQISDILHNDQLGRMQGLDISSKGSTLVKXXXX 562
            G  N+Q+PPFG  PSNM T  L  ++SH +S++L  D LGR+QGLDISSKGS+LVK    
Sbjct: 326  GLQNMQIPPFGHSPSNMSTHPLLPSDSHSLSEVLQTDSLGRLQGLDISSKGSSLVKSEGP 385

Query: 561  XXXXXXXSTTF 529
                   STTF
Sbjct: 386  SLSASESSTTF 396


Top