BLASTX nr result

ID: Glycyrrhiza24_contig00000822 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000822
         (681 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617941.1| 40S ribosomal protein [Medicago truncatula] ...   165   9e-39
gb|AAD47346.1|AF112440_1 ribosomal protein S26 [Pisum sativum] g...   163   3e-38
gb|AFK45380.1| unknown [Lotus japonicus]                              163   3e-38
ref|XP_003550031.1| PREDICTED: 40S ribosomal protein S26-1-like ...   161   1e-37
ref|XP_004138397.1| PREDICTED: 40S ribosomal protein S26-1-like ...   160   3e-37

>ref|XP_003617941.1| 40S ribosomal protein [Medicago truncatula]
           gi|355519276|gb|AET00900.1| 40S ribosomal protein
           [Medicago truncatula]
          Length = 230

 Score =  165 bits (417), Expect = 9e-39
 Identities = 83/108 (76%), Positives = 83/108 (76%)
 Frame = -1

Query: 537 TMTFXXXXXXXXXXXXXHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVY 358
           TMTF             HVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVY
Sbjct: 100 TMTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVY 159

Query: 357 DQYTLPKLYVKMQYCVSCAIHSHXXXXXXXXXXXXRDPPQRFIRRRDD 214
           DQYTLPKLYVKMQYCVSCAIHSH            RDPPQRFIRRRDD
Sbjct: 160 DQYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRFIRRRDD 207


>gb|AAD47346.1|AF112440_1 ribosomal protein S26 [Pisum sativum] gi|388492776|gb|AFK34454.1|
           unknown [Medicago truncatula]
           gi|388494954|gb|AFK35543.1| unknown [Medicago
           truncatula]
          Length = 130

 Score =  163 bits (412), Expect = 3e-38
 Identities = 82/107 (76%), Positives = 82/107 (76%)
 Frame = -1

Query: 534 MTFXXXXXXXXXXXXXHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYD 355
           MTF             HVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYD
Sbjct: 1   MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYD 60

Query: 354 QYTLPKLYVKMQYCVSCAIHSHXXXXXXXXXXXXRDPPQRFIRRRDD 214
           QYTLPKLYVKMQYCVSCAIHSH            RDPPQRFIRRRDD
Sbjct: 61  QYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRFIRRRDD 107


>gb|AFK45380.1| unknown [Lotus japonicus]
          Length = 129

 Score =  163 bits (412), Expect = 3e-38
 Identities = 82/107 (76%), Positives = 82/107 (76%)
 Frame = -1

Query: 534 MTFXXXXXXXXXXXXXHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYD 355
           MTF             HVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYD
Sbjct: 1   MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYD 60

Query: 354 QYTLPKLYVKMQYCVSCAIHSHXXXXXXXXXXXXRDPPQRFIRRRDD 214
           QYTLPKLYVKMQYCVSCAIHSH            RDPPQRFIRRRDD
Sbjct: 61  QYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRFIRRRDD 107


>ref|XP_003550031.1| PREDICTED: 40S ribosomal protein S26-1-like [Glycine max]
          Length = 129

 Score =  161 bits (408), Expect = 1e-37
 Identities = 81/107 (75%), Positives = 82/107 (76%)
 Frame = -1

Query: 534 MTFXXXXXXXXXXXXXHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYD 355
           MTF             HVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVY+
Sbjct: 1   MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYE 60

Query: 354 QYTLPKLYVKMQYCVSCAIHSHXXXXXXXXXXXXRDPPQRFIRRRDD 214
           QYTLPKLYVKMQYCVSCAIHSH            RDPPQRFIRRRDD
Sbjct: 61  QYTLPKLYVKMQYCVSCAIHSHVVRVRSRTDRRKRDPPQRFIRRRDD 107


>ref|XP_004138397.1| PREDICTED: 40S ribosomal protein S26-1-like [Cucumis sativus]
           gi|449514728|ref|XP_004164463.1| PREDICTED: 40S
           ribosomal protein S26-1-like [Cucumis sativus]
          Length = 129

 Score =  160 bits (404), Expect = 3e-37
 Identities = 80/107 (74%), Positives = 81/107 (75%)
 Frame = -1

Query: 534 MTFXXXXXXXXXXXXXHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYD 355
           MTF             HVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYD
Sbjct: 1   MTFKRRNGGRNKHGRGHVKFIRCSNCGKCCPKDKAIKRFLVRNIVEQAAVRDVQEACVYD 60

Query: 354 QYTLPKLYVKMQYCVSCAIHSHXXXXXXXXXXXXRDPPQRFIRRRDD 214
           QYTLPKLY KMQYCVSCAIHSH            R+PPQRFIRRRDD
Sbjct: 61  QYTLPKLYAKMQYCVSCAIHSHVVRVRSRTDRRKREPPQRFIRRRDD 107


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