BLASTX nr result

ID: Glycyrrhiza24_contig00000814 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000814
         (2032 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycin...   549   e-163
ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23...   538   e-160
ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncat...   555   e-160
ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|2...   226   9e-61
ref|XP_003546120.1| PREDICTED: F-box/kelch-repeat protein At3g23...   228   3e-59

>ref|NP_001241466.1| uncharacterized protein LOC100815072 [Glycine max]
            gi|255637050|gb|ACU18857.1| unknown [Glycine max]
          Length = 406

 Score =  549 bits (1414), Expect(2) = e-163
 Identities = 257/309 (83%), Positives = 281/309 (90%)
 Frame = -3

Query: 1313 RIILSATTAEFHLKSCSVSSLFNNPSTTVSEDLNYPVKNKFRHDGIVGSCNGLLCFAIKG 1134
            RIILSATTAEFHLKSCS+SSLFNNPS+TV +DLNYPVKNKFRHDGIVGSCNGLLCFAIKG
Sbjct: 103  RIILSATTAEFHLKSCSLSSLFNNPSSTVCDDLNYPVKNKFRHDGIVGSCNGLLCFAIKG 162

Query: 1133 DCVLLWNPSTRVSKKSPPLGNNWRPGCFTAFGLGYDHITEDYKVVAVFCDPNEFFSESKV 954
            DCVLLWNPS RVSKKSPPLGNNWRPGCFTAFGLGYDH+ EDYKVVAVFCDP+E+F E KV
Sbjct: 163  DCVLLWNPSIRVSKKSPPLGNNWRPGCFTAFGLGYDHVNEDYKVVAVFCDPSEYFIECKV 222

Query: 953  KVYSMATNSWRKIQDFPHGVSPYQNSGKFVSGTLNWAANYXXXXXXXXXXXXXXXXXLHK 774
            KVYSMATNSWRKIQDFPHG  P+QNSGKFVSGTLNWAAN+                 LHK
Sbjct: 223  KVYSMATNSWRKIQDFPHGFLPFQNSGKFVSGTLNWAANH---SIGPSSFWVIVSLDLHK 279

Query: 773  ETYREVLLPPPDYEKEDCSTPTLGVLKGCLCLNYDYKRTDFVVWVMKEYGVRESWVKLVT 594
            ETYREVL  PPDYEKEDCSTP+LGVL+GCLC+NYDYK+T FVVW+MK+YGVRESWVKLV+
Sbjct: 280  ETYREVL--PPDYEKEDCSTPSLGVLQGCLCMNYDYKKTHFVVWMMKDYGVRESWVKLVS 337

Query: 593  VPYLPNPEDFSYSGPYCISENGEVLLMFEFDLIIYDPRDHSFRYPRIENGKGWFDAEVYV 414
            +PY+PNPEDFSYSGPY ISENG+VLLMFEFDLI+YDPR++SF+YP+IE+GKGWFDAEVYV
Sbjct: 338  IPYVPNPEDFSYSGPYYISENGKVLLMFEFDLILYDPRNNSFKYPKIESGKGWFDAEVYV 397

Query: 413  ETLVSPMKH 387
            ETLVSPMKH
Sbjct: 398  ETLVSPMKH 406



 Score = 54.3 bits (129), Expect(2) = e-163
 Identities = 38/78 (48%), Positives = 49/78 (62%)
 Frame = -1

Query: 1615 HRIGATRKRERSLSLINNTMEEYQTTXXXXXXXXPCLVQKQRSHVNDSESGRIPFFIPDE 1436
            HRIG TRKRER ++ ++ T     ++           V KQ+     SES  +PF +PDE
Sbjct: 8    HRIGFTRKRERLINPMDRTSPLPPSS-----------VPKQQPM---SESLPLPF-LPDE 52

Query: 1435 LLVEILSRLPVKSLLRFR 1382
            L+VEILSRLPVKSLL+FR
Sbjct: 53   LVVEILSRLPVKSLLQFR 70


>ref|XP_003546119.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 405

 Score =  538 bits (1385), Expect(2) = e-160
 Identities = 255/309 (82%), Positives = 278/309 (89%)
 Frame = -3

Query: 1313 RIILSATTAEFHLKSCSVSSLFNNPSTTVSEDLNYPVKNKFRHDGIVGSCNGLLCFAIKG 1134
            RIILSATTAEFHLKSCS+SSLFNN ST V ++LNYPVKNKFRHDGIVGSCNGLLCFAIKG
Sbjct: 103  RIILSATTAEFHLKSCSLSSLFNNLST-VCDELNYPVKNKFRHDGIVGSCNGLLCFAIKG 161

Query: 1133 DCVLLWNPSTRVSKKSPPLGNNWRPGCFTAFGLGYDHITEDYKVVAVFCDPNEFFSESKV 954
            DCVLLWNPS RVSKKSPPLGNNWRPGCFTAFGLGYDH+ EDYKVVAVFCDP+E+F E KV
Sbjct: 162  DCVLLWNPSIRVSKKSPPLGNNWRPGCFTAFGLGYDHVNEDYKVVAVFCDPSEYFIECKV 221

Query: 953  KVYSMATNSWRKIQDFPHGVSPYQNSGKFVSGTLNWAANYXXXXXXXXXXXXXXXXXLHK 774
            KVYSMATNSWRKIQDFPHG SP+QNSGKFVSGTLNWAAN+                 LHK
Sbjct: 222  KVYSMATNSWRKIQDFPHGFSPFQNSGKFVSGTLNWAANH---SIGSSSLWVIVSLDLHK 278

Query: 773  ETYREVLLPPPDYEKEDCSTPTLGVLKGCLCLNYDYKRTDFVVWVMKEYGVRESWVKLVT 594
            ETYREVL  PPDYEKEDCSTP LGVL+GCLC+NYDYK+T FVVW+MK+YG RESWVKLV+
Sbjct: 279  ETYREVL--PPDYEKEDCSTPGLGVLQGCLCMNYDYKKTHFVVWMMKDYGARESWVKLVS 336

Query: 593  VPYLPNPEDFSYSGPYCISENGEVLLMFEFDLIIYDPRDHSFRYPRIENGKGWFDAEVYV 414
            +PY+PNPE+FSYSGPY ISENGEVLLMFEFDLI+Y+PRD+SF+YP+IE+GKGWFDAEVYV
Sbjct: 337  IPYVPNPENFSYSGPYYISENGEVLLMFEFDLILYNPRDNSFKYPKIESGKGWFDAEVYV 396

Query: 413  ETLVSPMKH 387
            ETLVSPMKH
Sbjct: 397  ETLVSPMKH 405



 Score = 57.0 bits (136), Expect(2) = e-160
 Identities = 39/78 (50%), Positives = 50/78 (64%)
 Frame = -1

Query: 1615 HRIGATRKRERSLSLINNTMEEYQTTXXXXXXXXPCLVQKQRSHVNDSESGRIPFFIPDE 1436
            HRIG TRKRER ++ ++ T     ++           VQKQ+     SES  +PF +PDE
Sbjct: 8    HRIGFTRKRERLINPMDRTSPLPPSS-----------VQKQQGM---SESLPLPF-LPDE 52

Query: 1435 LLVEILSRLPVKSLLRFR 1382
            L+VEILSRLPVKSLL+FR
Sbjct: 53   LVVEILSRLPVKSLLQFR 70


>ref|XP_003594083.1| F-box/kelch-repeat protein [Medicago truncatula]
            gi|355483131|gb|AES64334.1| F-box/kelch-repeat protein
            [Medicago truncatula]
          Length = 366

 Score =  555 bits (1430), Expect(2) = e-160
 Identities = 263/309 (85%), Positives = 281/309 (90%), Gaps = 1/309 (0%)
 Frame = -3

Query: 1313 RIILSATTAEFHLKSCSVSSLFNNPSTTVSEDLNYPVKNKFRHDGIVGSCNGLLCFAIKG 1134
            RIILSATTAEFHLKSCS++SLFNNPST VS+DLNYPVKNKFRHDGIVGSCNGLLCFAIKG
Sbjct: 63   RIILSATTAEFHLKSCSITSLFNNPST-VSDDLNYPVKNKFRHDGIVGSCNGLLCFAIKG 121

Query: 1133 DCVLLWNPSTRVSKKSPPLGNNWRPGCFTAFGLGYDHITEDYKVVAVFCDPNEFFSESKV 954
            DCVLLWNPS RVSKKSPPLGNNWRPGCFT FGLGYDH+ +DYKVVAVFCDPNEFFSESKV
Sbjct: 122  DCVLLWNPSIRVSKKSPPLGNNWRPGCFTCFGLGYDHVNDDYKVVAVFCDPNEFFSESKV 181

Query: 953  KVYSMATNSWRKIQDFPHGVSPYQN-SGKFVSGTLNWAANYXXXXXXXXXXXXXXXXXLH 777
            KVYSMATN+WRKI DFPHGVSPYQN SGKFVSGTLNWA+NY                 L 
Sbjct: 182  KVYSMATNTWRKIHDFPHGVSPYQNSSGKFVSGTLNWASNY---SIGSSSFWTIVSLDLE 238

Query: 776  KETYREVLLPPPDYEKEDCSTPTLGVLKGCLCLNYDYKRTDFVVWVMKEYGVRESWVKLV 597
            KETYREVL  PPDYEKE+CSTP+L VLKGCLC+NYDYK+TDFVVW+MK+YGVRESW+KL+
Sbjct: 239  KETYREVL--PPDYEKEECSTPSLSVLKGCLCMNYDYKKTDFVVWLMKDYGVRESWIKLL 296

Query: 596  TVPYLPNPEDFSYSGPYCISENGEVLLMFEFDLIIYDPRDHSFRYPRIENGKGWFDAEVY 417
            T+PYLPNPEDFSYSGPYCISENGEVLLMFEFDLI+YDPRDHSFRYPRIE GKGWFDAEVY
Sbjct: 297  TIPYLPNPEDFSYSGPYCISENGEVLLMFEFDLILYDPRDHSFRYPRIEGGKGWFDAEVY 356

Query: 416  VETLVSPMK 390
            VE+LVSPMK
Sbjct: 357  VESLVSPMK 365



 Score = 38.9 bits (89), Expect(2) = e-160
 Identities = 16/23 (69%), Positives = 22/23 (95%)
 Frame = -1

Query: 1450 FIPDELLVEILSRLPVKSLLRFR 1382
            F+P+EL++EIL +LP+KSLLRFR
Sbjct: 7    FLPEELILEILIKLPIKSLLRFR 29


>ref|XP_002312730.1| predicted protein [Populus trichocarpa] gi|222852550|gb|EEE90097.1|
            predicted protein [Populus trichocarpa]
          Length = 445

 Score =  226 bits (575), Expect(2) = 9e-61
 Identities = 128/315 (40%), Positives = 185/315 (58%), Gaps = 9/315 (2%)
 Frame = -3

Query: 1310 IILSATTAEFHLKSCSVSSLFNNPSTTVSEDLNYPVKNKFRHDGIVGSCNGLLCFAIKGD 1131
            I++S++   F LKSCS+ S++NNP T       Y +K+ +R+D +VGSC+GL+C  IK D
Sbjct: 137  IVISSSEPLFRLKSCSLYSVYNNPVTDAVVIDYYLLKDIYRYDWVVGSCDGLVCLGIKQD 196

Query: 1130 CVLLWNPSTRVSKKSPPLGNNWRPGCFTAFGLGYDHITEDYKVVAVFCDPNEFFSES--- 960
             V+LWNPSTRV  + P LG   + G +T FG GYD   +DYKV+A+FC    F ++S   
Sbjct: 197  FVVLWNPSTRVFNRLPDLGFAKKLGSYTVFGFGYDSQIDDYKVLAMFC----FLTKSVYG 252

Query: 959  ------KVKVYSMATNSWRKIQDFPHGVSPYQNSGKFVSGTLNWAANYXXXXXXXXXXXX 798
                  ++KV ++    WR+++DF  G+ PY  SGK V G L W                
Sbjct: 253  GSRYVTRIKVCALKGECWRRLEDFGLGL-PYDVSGKHVDGKLCWPV---MPEGSIGSAWS 308

Query: 797  XXXXXLHKETYREVLLPPPDYEKEDCSTPTLGVLKGCLCLNYDYKRTDFVVWVMKEYGVR 618
                 L +E + EV+   PDY         LGVL+G LC+  +Y+     VWV+KE+GVR
Sbjct: 309  IVAFDLAQEMFEEVV--QPDYGAVGYER-VLGVLQGWLCVMCNYQGVRADVWVLKEFGVR 365

Query: 617  ESWVKLVTVPYLPNPEDFSYSGPYCISENGEVLLMFEFDLIIYDPRDHSFRYPRIENGKG 438
            +SW KL ++PYL +P  F YS P CI   GEVLL ++  L+IY+P+  +FRYP +     
Sbjct: 366  DSWTKLFSIPYLDDPLWFHYSVPLCIDVGGEVLLEYKSVLVIYNPKHGTFRYPVMNGASS 425

Query: 437  WFDAEVYVETLVSPM 393
              +A+VY+++LVSP+
Sbjct: 426  CIEADVYIQSLVSPV 440



 Score = 36.6 bits (83), Expect(2) = 9e-61
 Identities = 15/22 (68%), Positives = 20/22 (90%)
 Frame = -1

Query: 1447 IPDELLVEILSRLPVKSLLRFR 1382
            +P EL++EILSRLP KSL++FR
Sbjct: 79   LPHELIIEILSRLPAKSLIKFR 100


>ref|XP_003546120.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 393

 Score =  228 bits (580), Expect(2) = 3e-59
 Identities = 126/297 (42%), Positives = 178/297 (59%)
 Frame = -3

Query: 1286 EFHLKSCSVSSLFNNPSTTVSEDLNYPVKNKFRHDGIVGSCNGLLCFAIKGDCVLLWNPS 1107
            EF L++  +S +FN  +   +E L YP  N+  +D IVGSC+G+LCFA+     LLWNPS
Sbjct: 107  EFILRAYPLSDVFNAVAVNATE-LRYPFNNRKCYDFIVGSCDGILCFAVDQRRALLWNPS 165

Query: 1106 TRVSKKSPPLGNNWRPGCFTAFGLGYDHITEDYKVVAVFCDPNEFFSESKVKVYSMATNS 927
                KK PPL N  R G +T  G GYD   + YKVVA+FC   +   E++VKV ++ T+S
Sbjct: 166  IGKFKKLPPLDNERRNGSYTIHGFGYDRFADSYKVVAIFCYECDGRYETQVKVLTLGTDS 225

Query: 926  WRKIQDFPHGVSPYQNSGKFVSGTLNWAANYXXXXXXXXXXXXXXXXXLHKETYREVLLP 747
            WR+IQ+FP G+ P+  SGKFVSGT+NW A+                  LHKE+Y EVL P
Sbjct: 226  WRRIQEFPSGL-PFDESGKFVSGTVNWLAS------NDSSSLIIVSLDLHKESYEEVLQP 278

Query: 746  PPDYEKEDCSTPTLGVLKGCLCLNYDYKRTDFVVWVMKEYGVRESWVKLVTVPYLPNPED 567
               Y        TLGVL+ CLC+   +  T   VW+MK+YG +ESW KL  VPY+   + 
Sbjct: 279  ---YYGVAVVNLTLGVLRDCLCV-LSHADTFLDVWLMKDYGNKESWTKLFRVPYMGISDS 334

Query: 566  FSYSGPYCISENGEVLLMFEFDLIIYDPRDHSFRYPRIENGKGWFDAEVYVETLVSP 396
            + Y+   CISE+ +VL+ F  +L +Y+ R+ + + P I++   +   EVY+E+L+SP
Sbjct: 335  YLYTKALCISEDDQVLMEFNSELAVYNSRNGTSKIPDIQDIYMYMTPEVYIESLISP 391



 Score = 29.6 bits (65), Expect(2) = 3e-59
 Identities = 14/22 (63%), Positives = 17/22 (77%)
 Frame = -1

Query: 1447 IPDELLVEILSRLPVKSLLRFR 1382
            +P EL+ EIL RLPVK LL+ R
Sbjct: 47   LPIELIQEILQRLPVKFLLQLR 68


Top