BLASTX nr result

ID: Glycyrrhiza24_contig00000796 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000796
         (518 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521514.1| PREDICTED: uncharacterized protein LOC100806...   143   1e-32
ref|XP_003553635.1| PREDICTED: uncharacterized protein LOC100799...   136   2e-30
ref|XP_003638105.1| Pre-mRNA-splicing factor rse1 [Medicago trun...   130   1e-28
ref|XP_003638096.1| DNA damage-binding protein, partial [Medicag...   130   1e-28
ref|XP_002531586.1| spliceosomal protein sap, putative [Ricinus ...   128   4e-28

>ref|XP_003521514.1| PREDICTED: uncharacterized protein LOC100806799 [Glycine max]
          Length = 1278

 Score =  143 bits (361), Expect = 1e-32
 Identities = 75/108 (69%), Positives = 81/108 (75%), Gaps = 5/108 (4%)
 Frame = +1

Query: 208 MAVSEEECXXXXXXXXXXXXXXXXXXXX----CVLRGSVVLQVLHAHIRSPSSKDVVFGK 375
           MAVSEEEC                        CVLRGSVVLQVLHAHIRSPSS DV+FGK
Sbjct: 1   MAVSEEECSSANSGSGPSSSSSSASARYYLSKCVLRGSVVLQVLHAHIRSPSSNDVIFGK 60

Query: 376 ETSIELVVIDENGNVESVCDQPVFGTIKDLAVLPWNEKF-CARDPQVW 516
           ETSIELVVIDE+GNV+SVCDQPVFGT+KDLA+LPWNEKF  ARDPQ+W
Sbjct: 61  ETSIELVVIDEDGNVQSVCDQPVFGTVKDLAILPWNEKFRVARDPQLW 108


>ref|XP_003553635.1| PREDICTED: uncharacterized protein LOC100799711 [Glycine max]
          Length = 1258

 Score =  136 bits (342), Expect = 2e-30
 Identities = 73/108 (67%), Positives = 78/108 (72%), Gaps = 5/108 (4%)
 Frame = +1

Query: 208 MAVSEEECXXXXXXXXXXXXXXXXXXXX----CVLRGSVVLQVLHAHIRSPSSKDVVFGK 375
           MAVSEEEC                        CV RGSVVL VLHAHIRSPSS DVVFGK
Sbjct: 1   MAVSEEECSSAKSGSSGPSSSSSSASRYYLSKCVFRGSVVLHVLHAHIRSPSSNDVVFGK 60

Query: 376 ETSIELVVIDENGNVESVCDQPVFGTIKDLAVLPWNEKF-CARDPQVW 516
           ETSIELVVIDE+GNV+SV DQPVFGT+KDLA+LPWNEKF  ARDPQ+W
Sbjct: 61  ETSIELVVIDEDGNVQSVFDQPVFGTLKDLAILPWNEKFRAARDPQLW 108


>ref|XP_003638105.1| Pre-mRNA-splicing factor rse1 [Medicago truncatula]
           gi|355504040|gb|AES85243.1| Pre-mRNA-splicing factor
           rse1 [Medicago truncatula]
          Length = 1370

 Score =  130 bits (327), Expect = 1e-28
 Identities = 66/102 (64%), Positives = 74/102 (72%), Gaps = 1/102 (0%)
 Frame = +1

Query: 208 MAVSEEECXXXXXXXXXXXXXXXXXXXX-CVLRGSVVLQVLHAHIRSPSSKDVVFGKETS 384
           MAVSE+EC                     CV+R S +LQVL+AH+RSPSS DVVFGKETS
Sbjct: 1   MAVSEQECSSAKSSPSSSSSSTSRYYLSKCVVRASAILQVLYAHLRSPSSNDVVFGKETS 60

Query: 385 IELVVIDENGNVESVCDQPVFGTIKDLAVLPWNEKFCARDPQ 510
           IELVVIDE GNV++VCDQPVFG IKDLAVLPWN+KFC R PQ
Sbjct: 61  IELVVIDEEGNVQTVCDQPVFGIIKDLAVLPWNDKFCTRRPQ 102


>ref|XP_003638096.1| DNA damage-binding protein, partial [Medicago truncatula]
           gi|355504031|gb|AES85234.1| DNA damage-binding protein,
           partial [Medicago truncatula]
          Length = 822

 Score =  130 bits (327), Expect = 1e-28
 Identities = 66/102 (64%), Positives = 74/102 (72%), Gaps = 1/102 (0%)
 Frame = +1

Query: 208 MAVSEEECXXXXXXXXXXXXXXXXXXXX-CVLRGSVVLQVLHAHIRSPSSKDVVFGKETS 384
           MAVSE+EC                     CV+R S +LQVL+AH+RSPSS DVVFGKETS
Sbjct: 1   MAVSEQECSSAKSSPSSSSSSTSRYYLSKCVVRASAILQVLYAHLRSPSSNDVVFGKETS 60

Query: 385 IELVVIDENGNVESVCDQPVFGTIKDLAVLPWNEKFCARDPQ 510
           IELVVIDE GNV++VCDQPVFG IKDLAVLPWN+KFC R PQ
Sbjct: 61  IELVVIDEEGNVQTVCDQPVFGIIKDLAVLPWNDKFCTRRPQ 102


>ref|XP_002531586.1| spliceosomal protein sap, putative [Ricinus communis]
           gi|223528782|gb|EEF30789.1| spliceosomal protein sap,
           putative [Ricinus communis]
          Length = 1220

 Score =  128 bits (322), Expect = 4e-28
 Identities = 64/104 (61%), Positives = 75/104 (72%), Gaps = 2/104 (1%)
 Frame = +1

Query: 208 MAVSEEECXXXXXXXXXXXXXXXXXXXX--CVLRGSVVLQVLHAHIRSPSSKDVVFGKET 381
           MAVSEEEC                      CVLRGSVVLQV++ H RSPSS D+VFGKET
Sbjct: 1   MAVSEEECSNAKSRSSSPSASSNSAHYLAKCVLRGSVVLQVVYGHFRSPSSNDIVFGKET 60

Query: 382 SIELVVIDENGNVESVCDQPVFGTIKDLAVLPWNEKFCARDPQV 513
           SIELV+I E+G ++S+C+QPVFGTIKDLAV+PWNEKFC R PQ+
Sbjct: 61  SIELVIIGEDGILQSICEQPVFGTIKDLAVIPWNEKFCTRSPQM 104


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