BLASTX nr result

ID: Glycyrrhiza24_contig00000745 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000745
         (1470 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539856.1| PREDICTED: 50S ribosomal protein L1, chlorop...   412   e-112
ref|XP_003534390.1| PREDICTED: 50S ribosomal protein L1, chlorop...   412   e-112
ref|XP_004158181.1| PREDICTED: 50S ribosomal protein L1, chlorop...   395   e-107
ref|XP_002298416.1| predicted protein [Populus trichocarpa] gi|2...   392   e-107
gb|ABK96759.1| unknown [Populus trichocarpa x Populus deltoides]      392   e-106

>ref|XP_003539856.1| PREDICTED: 50S ribosomal protein L1, chloroplastic-like [Glycine max]
          Length = 340

 Score =  412 bits (1059), Expect = e-112
 Identities = 207/217 (95%), Positives = 213/217 (98%)
 Frame = -2

Query: 1160 LPLKRDRVRSKRFLEIQKLREIKREYDLKTAITLVKETAKTKFLETVEAHFRLNIDPKYN 981
            LPLKRDR RSKRFLEIQ+LRE K+EYDLKTAI+LVKETAKTKF+ETVEAHFRLNIDPKYN
Sbjct: 99   LPLKRDRTRSKRFLEIQQLRERKKEYDLKTAISLVKETAKTKFVETVEAHFRLNIDPKYN 158

Query: 980  DQQLRATVNLPKGTGKPVKVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLI 801
            DQQLRATVNLPKGTGKPVKVAVLTQGE+FDEAKNAGADLVGGEDLIEQIK GFMEFDKLI
Sbjct: 159  DQQLRATVNLPKGTGKPVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKAGFMEFDKLI 218

Query: 800  ASPDMMPKVASLGKILGPRGLMPNPKAGTVTANIPQAIADFKQGKVEYRADKTGIVHLPF 621
            ASPDMMPKVASLGKILGPRGLMPNPKAGTVT NIPQAIA+FKQGKVEYRADKTGIVHLPF
Sbjct: 219  ASPDMMPKVASLGKILGPRGLMPNPKAGTVTPNIPQAIAEFKQGKVEYRADKTGIVHLPF 278

Query: 620  GKADFPEEDLLVNLLAAVKSVEANKPSGAKGVYWKSA 510
            GKADFPEEDLLVNLLAAVKSVEANKPSGAKGVYWKSA
Sbjct: 279  GKADFPEEDLLVNLLAAVKSVEANKPSGAKGVYWKSA 315


>ref|XP_003534390.1| PREDICTED: 50S ribosomal protein L1, chloroplastic-like [Glycine max]
          Length = 345

 Score =  412 bits (1059), Expect = e-112
 Identities = 207/217 (95%), Positives = 213/217 (98%)
 Frame = -2

Query: 1160 LPLKRDRVRSKRFLEIQKLREIKREYDLKTAITLVKETAKTKFLETVEAHFRLNIDPKYN 981
            LPLKRDR RSKRFLEIQ+LRE K+EYDLKTAI+LVKETAKTKF+ETVEAHFRLNIDPKYN
Sbjct: 104  LPLKRDRTRSKRFLEIQQLRERKKEYDLKTAISLVKETAKTKFVETVEAHFRLNIDPKYN 163

Query: 980  DQQLRATVNLPKGTGKPVKVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLI 801
            DQQLRATVNLPKGTGKPVKVAVLTQGE+FDEAKNAGADLVGGEDLIEQIK GFMEFDKLI
Sbjct: 164  DQQLRATVNLPKGTGKPVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKAGFMEFDKLI 223

Query: 800  ASPDMMPKVASLGKILGPRGLMPNPKAGTVTANIPQAIADFKQGKVEYRADKTGIVHLPF 621
            ASPDMMPKVASLGKILGPRGLMPNPKAGTVT NIPQAIA+FKQGKVEYRADKTGIVHLPF
Sbjct: 224  ASPDMMPKVASLGKILGPRGLMPNPKAGTVTPNIPQAIAEFKQGKVEYRADKTGIVHLPF 283

Query: 620  GKADFPEEDLLVNLLAAVKSVEANKPSGAKGVYWKSA 510
            GKADFPEEDLLVNLLAAVKSVEANKPSGAKGVYWKSA
Sbjct: 284  GKADFPEEDLLVNLLAAVKSVEANKPSGAKGVYWKSA 320


>ref|XP_004158181.1| PREDICTED: 50S ribosomal protein L1, chloroplastic-like [Cucumis
            sativus]
          Length = 360

 Score =  395 bits (1015), Expect = e-107
 Identities = 195/217 (89%), Positives = 208/217 (95%)
 Frame = -2

Query: 1160 LPLKRDRVRSKRFLEIQKLREIKREYDLKTAITLVKETAKTKFLETVEAHFRLNIDPKYN 981
            LPLKRDR RSKRFLEIQKLRE K EYDLKTAI+L+K+T+ TKF+ET EAHFRLNIDPKYN
Sbjct: 117  LPLKRDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFVETAEAHFRLNIDPKYN 176

Query: 980  DQQLRATVNLPKGTGKPVKVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLI 801
            DQQLRATVNLPKGTG+ VKVAVLTQGE+FDEAKNAGADLVGGEDLIEQIKGGFMEFDKLI
Sbjct: 177  DQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLI 236

Query: 800  ASPDMMPKVASLGKILGPRGLMPNPKAGTVTANIPQAIADFKQGKVEYRADKTGIVHLPF 621
            ASPDMMPKVASLGK+LGPRGLMPNPKAGTVT NIPQAIA+FKQGKVEYRADKTGIVHLPF
Sbjct: 237  ASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPF 296

Query: 620  GKADFPEEDLLVNLLAAVKSVEANKPSGAKGVYWKSA 510
            GKADF E+DLLVNLL+A+KSVE NKP+GAKGVYWKSA
Sbjct: 297  GKADFSEDDLLVNLLSAIKSVEVNKPTGAKGVYWKSA 333


>ref|XP_002298416.1| predicted protein [Populus trichocarpa] gi|222845674|gb|EEE83221.1|
            predicted protein [Populus trichocarpa]
          Length = 355

 Score =  392 bits (1008), Expect = e-107
 Identities = 195/217 (89%), Positives = 209/217 (96%)
 Frame = -2

Query: 1160 LPLKRDRVRSKRFLEIQKLREIKREYDLKTAITLVKETAKTKFLETVEAHFRLNIDPKYN 981
            LPLKRDR RSKRFLEIQKLREIK+EYDL  AI+L+K+TA TKF+E+ EAHFRLNIDPKYN
Sbjct: 113  LPLKRDRTRSKRFLEIQKLREIKKEYDLGAAISLLKKTASTKFVESAEAHFRLNIDPKYN 172

Query: 980  DQQLRATVNLPKGTGKPVKVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLI 801
            DQQLRATVNLPKGTG+ VKVAVLTQGE+FDEAKNAGADLVGGEDLI+QIKGG+MEFDKLI
Sbjct: 173  DQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIQQIKGGYMEFDKLI 232

Query: 800  ASPDMMPKVASLGKILGPRGLMPNPKAGTVTANIPQAIADFKQGKVEYRADKTGIVHLPF 621
            ASPDMMPKVASLGKILGPRGLMPNPKAGTVT +IPQAIA+FK+GKVEYRADKTGIVH+PF
Sbjct: 233  ASPDMMPKVASLGKILGPRGLMPNPKAGTVTTDIPQAIAEFKKGKVEYRADKTGIVHIPF 292

Query: 620  GKADFPEEDLLVNLLAAVKSVEANKPSGAKGVYWKSA 510
            GKADF EEDLLVNLLAAVKSVEANKPSGAKGVYWKSA
Sbjct: 293  GKADFSEEDLLVNLLAAVKSVEANKPSGAKGVYWKSA 329


>gb|ABK96759.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 355

 Score =  392 bits (1007), Expect = e-106
 Identities = 194/217 (89%), Positives = 209/217 (96%)
 Frame = -2

Query: 1160 LPLKRDRVRSKRFLEIQKLREIKREYDLKTAITLVKETAKTKFLETVEAHFRLNIDPKYN 981
            LPLKRDR RSKRFLEIQKLREIK+EYDL  AI+L+K+TA TKF+E+ EAHFRLNIDPKYN
Sbjct: 113  LPLKRDRTRSKRFLEIQKLREIKKEYDLGAAISLLKKTASTKFVESAEAHFRLNIDPKYN 172

Query: 980  DQQLRATVNLPKGTGKPVKVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLI 801
            DQQLRATVNLPKGTG+ +KVAVLTQGE+FDEAKNAGADLVGGEDLI+QIKGG+MEFDKLI
Sbjct: 173  DQQLRATVNLPKGTGQTIKVAVLTQGEKFDEAKNAGADLVGGEDLIQQIKGGYMEFDKLI 232

Query: 800  ASPDMMPKVASLGKILGPRGLMPNPKAGTVTANIPQAIADFKQGKVEYRADKTGIVHLPF 621
            ASPDMMPKVASLGKILGPRGLMPNPKAGTVT +IPQAIA+FK+GKVEYRADKTGIVH+PF
Sbjct: 233  ASPDMMPKVASLGKILGPRGLMPNPKAGTVTTDIPQAIAEFKKGKVEYRADKTGIVHIPF 292

Query: 620  GKADFPEEDLLVNLLAAVKSVEANKPSGAKGVYWKSA 510
            GKADF EEDLLVNLLAAVKSVEANKPSGAKGVYWKSA
Sbjct: 293  GKADFSEEDLLVNLLAAVKSVEANKPSGAKGVYWKSA 329


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