BLASTX nr result
ID: Glycyrrhiza24_contig00000739
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00000739
(1990 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001237509.1| serine hydroxymethyltransferase 5 [Glycine m... 989 0.0
gb|AFK45159.1| unknown [Lotus japonicus] 965 0.0
ref|XP_003612954.1| Serine hydroxymethyltransferase [Medicago tr... 957 0.0
sp|P34899.1|GLYM_PEA RecName: Full=Serine hydroxymethyltransfera... 953 0.0
gb|ABO61382.1| mitochondrial serine hydroxymethyltransferase [Po... 950 0.0
>ref|NP_001237509.1| serine hydroxymethyltransferase 5 [Glycine max]
gi|222142537|gb|ACM45955.1| serine
hydroxymethyltransferase 5 [Glycine max]
Length = 518
Score = 989 bits (2558), Expect = 0.0
Identities = 492/518 (94%), Positives = 508/518 (98%)
Frame = -3
Query: 1931 MAMAMALRRLSSSFEKPLRPLFNAGSIYYKSSLPDEAVYEKEKPGVTWPKQLNAPLEAVD 1752
MAMAMALRRLSSS +KPLRPLFNAGS+YYKSSLPDEAVY+KE+PGVTWPKQLNA LE VD
Sbjct: 1 MAMAMALRRLSSSIDKPLRPLFNAGSLYYKSSLPDEAVYDKERPGVTWPKQLNASLEVVD 60
Query: 1751 PEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYID 1572
PEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYID
Sbjct: 61 PEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYID 120
Query: 1571 MAETLCQKRALEAFRLDPAKWGVNVQPLSGSPANFHVYTALLKPHDRIMALDLPHGGHLS 1392
MAETLCQKRALEAFRLDPAKWGVNVQPLSGSPANFHVYTALLKPH+RIMALDLPHGGHLS
Sbjct: 121 MAETLCQKRALEAFRLDPAKWGVNVQPLSGSPANFHVYTALLKPHERIMALDLPHGGHLS 180
Query: 1391 HGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQMEQMATLFRPKLIVAGASAYARLYD 1212
HGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQME+ ATLFRPKLIVAGASAYARLYD
Sbjct: 181 HGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQMEKSATLFRPKLIVAGASAYARLYD 240
Query: 1211 YARVRKVCDKQKAVLLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFR 1032
Y RVRKVCDKQKA+LLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIF+R
Sbjct: 241 YERVRKVCDKQKAILLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFYR 300
Query: 1031 KGVKEINKQGKEVLYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYRAYQEQV 852
KGVKEINKQGKE+LYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYRAYQEQV
Sbjct: 301 KGVKEINKQGKELLYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYRAYQEQV 360
Query: 851 LSNCSKFAQALTEKGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPG 672
LSN KFAQAL+E+GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPG
Sbjct: 361 LSNSFKFAQALSERGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPG 420
Query: 671 DVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEFFDAAVNVAVKIKAESKGTKLKDFMATI 492
DVSAMVPGGIRMGTPALTSRGFVEEDF KVAEFFDAAV +AVKIK +SKGTKLKDF+ATI
Sbjct: 421 DVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEFFDAAVKLAVKIKGQSKGTKLKDFLATI 480
Query: 491 QSSSTFQSEIAKLRHDVEEFAKQFPTIGFEKATMKYKN 378
QSSSTFQSEIAKLRHDVE++AKQFPTIGFEKATMKYKN
Sbjct: 481 QSSSTFQSEIAKLRHDVEDYAKQFPTIGFEKATMKYKN 518
>gb|AFK45159.1| unknown [Lotus japonicus]
Length = 516
Score = 965 bits (2495), Expect = 0.0
Identities = 482/517 (93%), Positives = 501/517 (96%)
Frame = -3
Query: 1931 MAMAMALRRLSSSFEKPLRPLFNAGSIYYKSSLPDEAVYEKEKPGVTWPKQLNAPLEAVD 1752
MAMAMALRRLSSS +KPLRPLFNA S+YYKSSLPDEAVYEK VTWPKQLNAPLE VD
Sbjct: 1 MAMAMALRRLSSSIDKPLRPLFNASSVYYKSSLPDEAVYEKTT--VTWPKQLNAPLEVVD 58
Query: 1751 PEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYID 1572
PEIADIIE EKARQWKGLELIPSENFTS+SVMQAVGSVMTNKYSEGYPGARYYGGNE+ID
Sbjct: 59 PEIADIIEHEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEFID 118
Query: 1571 MAETLCQKRALEAFRLDPAKWGVNVQPLSGSPANFHVYTALLKPHDRIMALDLPHGGHLS 1392
MAETLCQKRALEAFRLDPAKWGVNVQPLSGSP+NFHVYTALLKPHDRIMALDLPHGGHLS
Sbjct: 119 MAETLCQKRALEAFRLDPAKWGVNVQPLSGSPSNFHVYTALLKPHDRIMALDLPHGGHLS 178
Query: 1391 HGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQMEQMATLFRPKLIVAGASAYARLYD 1212
HGYQTDTKKISAVSIFFETMPYRL+ESTGYIDYDQ+E A LFRPKLIVAGASAYARLYD
Sbjct: 179 HGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEASAKLFRPKLIVAGASAYARLYD 238
Query: 1211 YARVRKVCDKQKAVLLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFR 1032
Y R+RKVCDKQKAVLLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFR
Sbjct: 239 YDRIRKVCDKQKAVLLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFR 298
Query: 1031 KGVKEINKQGKEVLYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYRAYQEQV 852
KGVKEINKQGKEVLYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEY+AYQEQV
Sbjct: 299 KGVKEINKQGKEVLYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQV 358
Query: 851 LSNCSKFAQALTEKGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPG 672
LSNCSKFAQAL+E+GYELVSGGTENHLVLVNLKNKGIDGSRVEKVLE+VHIAANKNTVPG
Sbjct: 359 LSNCSKFAQALSERGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLESVHIAANKNTVPG 418
Query: 671 DVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEFFDAAVNVAVKIKAESKGTKLKDFMATI 492
DVSAMVPGGIRMGTPALTSRGFV+EDF KVAEFFDAAVN+A+K KAESKGTKLKDF+ATI
Sbjct: 419 DVSAMVPGGIRMGTPALTSRGFVKEDFVKVAEFFDAAVNLALKAKAESKGTKLKDFLATI 478
Query: 491 QSSSTFQSEIAKLRHDVEEFAKQFPTIGFEKATMKYK 381
Q SS FQ+EIAKLRHDVEE+AKQFPTIGFEKATM+YK
Sbjct: 479 QESSYFQTEIAKLRHDVEEYAKQFPTIGFEKATMEYK 515
>ref|XP_003612954.1| Serine hydroxymethyltransferase [Medicago truncatula]
gi|163889372|gb|ABY48142.1|
serine-hydroxymethyltransferase [Medicago truncatula]
gi|355514289|gb|AES95912.1| Serine
hydroxymethyltransferase [Medicago truncatula]
Length = 518
Score = 957 bits (2475), Expect = 0.0
Identities = 472/516 (91%), Positives = 500/516 (96%)
Frame = -3
Query: 1931 MAMAMALRRLSSSFEKPLRPLFNAGSIYYKSSLPDEAVYEKEKPGVTWPKQLNAPLEAVD 1752
MAMAMALRRLSSS K RPLF+A S+YYKSSLPDEAVY+KE V+WPKQLN+ LE +D
Sbjct: 1 MAMAMALRRLSSSINKSSRPLFSASSVYYKSSLPDEAVYDKENSRVSWPKQLNSSLEEID 60
Query: 1751 PEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYID 1572
PEIADIIELEKARQWKGLELIPSENFTS+SVMQAVGS+MTNKYSEGYPGARYYGGNEYID
Sbjct: 61 PEIADIIELEKARQWKGLELIPSENFTSLSVMQAVGSIMTNKYSEGYPGARYYGGNEYID 120
Query: 1571 MAETLCQKRALEAFRLDPAKWGVNVQPLSGSPANFHVYTALLKPHDRIMALDLPHGGHLS 1392
MAETLCQKRALEAFRLDPAKWGVNVQPLSGSP+NFHVYTALLKPHDRIMALDLPHGGHLS
Sbjct: 121 MAETLCQKRALEAFRLDPAKWGVNVQPLSGSPSNFHVYTALLKPHDRIMALDLPHGGHLS 180
Query: 1391 HGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQMEQMATLFRPKLIVAGASAYARLYD 1212
HGYQTDTKKISAVSIFFETMPYRL+ESTGYIDYDQ+E+ ATLFRPKLIVAGASAYARLYD
Sbjct: 181 HGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYD 240
Query: 1211 YARVRKVCDKQKAVLLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFR 1032
YAR+RKVCDKQKAV+LADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFR
Sbjct: 241 YARIRKVCDKQKAVMLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFR 300
Query: 1031 KGVKEINKQGKEVLYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYRAYQEQV 852
KG+KE+NKQGKEV YDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEY+AYQEQV
Sbjct: 301 KGLKEVNKQGKEVFYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYKAYQEQV 360
Query: 851 LSNCSKFAQALTEKGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPG 672
LSNC+KFAQAL+EKGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPG
Sbjct: 361 LSNCAKFAQALSEKGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPG 420
Query: 671 DVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEFFDAAVNVAVKIKAESKGTKLKDFMATI 492
DVSAMVPGGIRMGTPALTSRGFVEEDF KVAE+FDA+VN+A+KIKAESKGTKLKDF+ T+
Sbjct: 421 DVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDASVNLALKIKAESKGTKLKDFVETL 480
Query: 491 QSSSTFQSEIAKLRHDVEEFAKQFPTIGFEKATMKY 384
QSSS QSEI+KLRHDVEEFAKQFPTIGFEK++MKY
Sbjct: 481 QSSSYVQSEISKLRHDVEEFAKQFPTIGFEKSSMKY 516
>sp|P34899.1|GLYM_PEA RecName: Full=Serine hydroxymethyltransferase, mitochondrial;
Short=SHMT; AltName: Full=Glycine
hydroxymethyltransferase; AltName: Full=Serine methylase;
Flags: Precursor gi|169158|gb|AAA33687.1| serine
hydroxymethyltransferase [Pisum sativum]
Length = 518
Score = 953 bits (2463), Expect = 0.0
Identities = 471/516 (91%), Positives = 498/516 (96%)
Frame = -3
Query: 1931 MAMAMALRRLSSSFEKPLRPLFNAGSIYYKSSLPDEAVYEKEKPGVTWPKQLNAPLEAVD 1752
MAMAMALR+LSSS K RPLF+A S+YYKSSLPDEAVY+KE P VTWPKQLN+PLE +D
Sbjct: 1 MAMAMALRKLSSSVNKSSRPLFSASSLYYKSSLPDEAVYDKENPRVTWPKQLNSPLEVID 60
Query: 1751 PEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYID 1572
PEIADIIELEKARQWKGLELIPSENFTS+SVMQAVGSVMTNKYSEGYPGARYYGGNEYID
Sbjct: 61 PEIADIIELEKARQWKGLELIPSENFTSLSVMQAVGSVMTNKYSEGYPGARYYGGNEYID 120
Query: 1571 MAETLCQKRALEAFRLDPAKWGVNVQPLSGSPANFHVYTALLKPHDRIMALDLPHGGHLS 1392
MAETLCQKRALEAFRLDPAKWGVNVQPLSGSP+NF VYTALLKPHDRIMALDLPHGGHLS
Sbjct: 121 MAETLCQKRALEAFRLDPAKWGVNVQPLSGSPSNFQVYTALLKPHDRIMALDLPHGGHLS 180
Query: 1391 HGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQMEQMATLFRPKLIVAGASAYARLYD 1212
HGYQTDTKKISAVSIFFETMPYRL+ESTGYIDYDQ+E+ ATLFRPKLIVAGASAYARLYD
Sbjct: 181 HGYQTDTKKISAVSIFFETMPYRLDESTGYIDYDQLEKSATLFRPKLIVAGASAYARLYD 240
Query: 1211 YARVRKVCDKQKAVLLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFR 1032
YAR+RKVCDKQKAVLLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFR
Sbjct: 241 YARIRKVCDKQKAVLLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFFR 300
Query: 1031 KGVKEINKQGKEVLYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYRAYQEQV 852
KG+KE+NKQGKEV YDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYRAYQEQV
Sbjct: 301 KGLKEVNKQGKEVFYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYRAYQEQV 360
Query: 851 LSNCSKFAQALTEKGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVPG 672
LSN SKFA+AL+EKGY+LVSGGTENHLVLVNLKNKGIDGSRVEKVLE VHIAANKNTVPG
Sbjct: 361 LSNSSKFAKALSEKGYDLVSGGTENHLVLVNLKNKGIDGSRVEKVLELVHIAANKNTVPG 420
Query: 671 DVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEFFDAAVNVAVKIKAESKGTKLKDFMATI 492
DVSAMVPGGIRMGTPALTSRGFVEEDF KVAE+FDAAV++A+K+KAESKGTKLKDF+ +
Sbjct: 421 DVSAMVPGGIRMGTPALTSRGFVEEDFVKVAEYFDAAVSLALKVKAESKGTKLKDFVEAL 480
Query: 491 QSSSTFQSEIAKLRHDVEEFAKQFPTIGFEKATMKY 384
Q+SS QSEI+KL+HDVEEFAKQFPTIGFEKATMKY
Sbjct: 481 QTSSYVQSEISKLKHDVEEFAKQFPTIGFEKATMKY 516
>gb|ABO61382.1| mitochondrial serine hydroxymethyltransferase [Populus tremuloides]
Length = 520
Score = 950 bits (2456), Expect = 0.0
Identities = 473/519 (91%), Positives = 501/519 (96%), Gaps = 1/519 (0%)
Frame = -3
Query: 1931 MAMAMALRRLSSSFEKPLRP-LFNAGSIYYKSSLPDEAVYEKEKPGVTWPKQLNAPLEAV 1755
+AM MALRRLSSSF+KPLRP LF A S+YY SSLP+EAVYEKEKPGV+WPKQLNAPLEAV
Sbjct: 3 VAMTMALRRLSSSFDKPLRPALFKATSLYYMSSLPNEAVYEKEKPGVSWPKQLNAPLEAV 62
Query: 1754 DPEIADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 1575
DP++ADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI
Sbjct: 63 DPQVADIIELEKARQWKGLELIPSENFTSVSVMQAVGSVMTNKYSEGYPGARYYGGNEYI 122
Query: 1574 DMAETLCQKRALEAFRLDPAKWGVNVQPLSGSPANFHVYTALLKPHDRIMALDLPHGGHL 1395
DMAE+LCQKRALEAFRLDPA+WGVNVQ LSGSPANF VYTALLKPH+RIMALDLPHGGHL
Sbjct: 123 DMAESLCQKRALEAFRLDPAQWGVNVQSLSGSPANFQVYTALLKPHERIMALDLPHGGHL 182
Query: 1394 SHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQMEQMATLFRPKLIVAGASAYARLY 1215
SHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQ+E+ ATLFRPKLIVAGASAYARLY
Sbjct: 183 SHGYQTDTKKISAVSIFFETMPYRLNESTGYIDYDQLEKSATLFRPKLIVAGASAYARLY 242
Query: 1214 DYARVRKVCDKQKAVLLADMAHISGLVAAGVIPSPFDYADVVTTTTHKSLRGPRGAMIFF 1035
DYAR+RKVCDKQKA+LLADMAHISGLVAA VIPSPF+YAD+VTTTTHKSLRGPRGAMIFF
Sbjct: 243 DYARIRKVCDKQKAILLADMAHISGLVAADVIPSPFEYADIVTTTTHKSLRGPRGAMIFF 302
Query: 1034 RKGVKEINKQGKEVLYDYEDKINQAVFPGLQGGPHNHTITGLAVALKQATTPEYRAYQEQ 855
RKG+KE+NKQGKEV YDYEDKINQAVFPGLQGGPHNHTI GLAVALKQATT EY+AYQEQ
Sbjct: 303 RKGLKEVNKQGKEVFYDYEDKINQAVFPGLQGGPHNHTIAGLAVALKQATTVEYKAYQEQ 362
Query: 854 VLSNCSKFAQALTEKGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLEAVHIAANKNTVP 675
VLSNC+KFAQ+L EKGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLE+VHIAANKNTVP
Sbjct: 363 VLSNCAKFAQSLVEKGYELVSGGTENHLVLVNLKNKGIDGSRVEKVLESVHIAANKNTVP 422
Query: 674 GDVSAMVPGGIRMGTPALTSRGFVEEDFAKVAEFFDAAVNVAVKIKAESKGTKLKDFMAT 495
GDVSAMVPGGIRMGTPALTSRGFVEEDFAKVA+FFDAAV VAVKIKAE+KGTKLKDF+AT
Sbjct: 423 GDVSAMVPGGIRMGTPALTSRGFVEEDFAKVADFFDAAVKVAVKIKAETKGTKLKDFLAT 482
Query: 494 IQSSSTFQSEIAKLRHDVEEFAKQFPTIGFEKATMKYKN 378
QS+ FQSEI+KLRHDVEE+AKQFPTIGFEK TMKYKN
Sbjct: 483 -QSAPHFQSEISKLRHDVEEYAKQFPTIGFEKETMKYKN 520