BLASTX nr result

ID: Glycyrrhiza24_contig00000671 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000671
         (1301 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 pr...   498   e-138
ref|XP_003531552.1| PREDICTED: chlorophyll a-b binding protein C...   495   e-138
gb|AFK41475.1| unknown [Lotus japonicus]                              494   e-137
ref|XP_003531041.1| PREDICTED: chlorophyll a-b binding protein C...   490   e-136
ref|XP_003524746.1| PREDICTED: LOW QUALITY PROTEIN: chlorophyll ...   488   e-135

>gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 precursor [Vigna radiata]
          Length = 258

 Score =  498 bits (1282), Expect = e-138
 Identities = 238/259 (91%), Positives = 251/259 (96%)
 Frame = +1

Query: 277  MAAATSGAVLNGLGSSFLCGGNRSQTLLLATTVGGKVGASVSPKRLIVAAAAAPKKSWIP 456
            MAAATSGAVLNGLGSSFL GG+RSQTLL AT++GGKVG +VSP+RLIV AAAAPKKSWIP
Sbjct: 1    MAAATSGAVLNGLGSSFLSGGSRSQTLL-ATSIGGKVGVAVSPRRLIVVAAAAPKKSWIP 59

Query: 457  AVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVG 636
             V+GGGNL+DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIFVG
Sbjct: 60   GVRGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVG 119

Query: 637  QAWSGVPWFEAGADPNAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWS 816
            QAWSGVPWFEAGADPNAIAPFSFGSLLGTQL+LMGWVESKRWVDFFNPDSQSVEWATPWS
Sbjct: 120  QAWSGVPWFEAGADPNAIAPFSFGSLLGTQLILMGWVESKRWVDFFNPDSQSVEWATPWS 179

Query: 817  RTAENFANATGDQGYPGGKFFDPLGLAGTIKDGVYIPDREKLERLKLAEIKHARIAMLAM 996
            +TAENFANATG+QGYPGGKFFDPLG AGT+KDGVYIPD EKLERLKLAEIKHARIAMLAM
Sbjct: 180  KTAENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAM 239

Query: 997  LTFYFEAGQGKTPLGALGL 1053
            L FYFEAGQGKTPLGALGL
Sbjct: 240  LIFYFEAGQGKTPLGALGL 258


>ref|XP_003531552.1| PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic
            [Glycine max]
          Length = 261

 Score =  495 bits (1275), Expect = e-138
 Identities = 240/262 (91%), Positives = 251/262 (95%), Gaps = 3/262 (1%)
 Frame = +1

Query: 277  MAAATSGAVLNGLGSSFLCGGNRSQTLLLATTVGGKVGAS---VSPKRLIVAAAAAPKKS 447
            MAAATSGAVLNGLGSSFL GGNRSQTLL AT +GGKVGA+   VSP+RLIV AAAAPKKS
Sbjct: 1    MAAATSGAVLNGLGSSFLSGGNRSQTLL-ATAIGGKVGAAAVTVSPRRLIVVAAAAPKKS 59

Query: 448  WIPAVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGI 627
            W+P V+GGGNL+DPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GI
Sbjct: 60   WLPGVRGGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGI 119

Query: 628  FVGQAWSGVPWFEAGADPNAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWAT 807
            FVGQAWSGVPWFEAGADPNAIAPFSFG+LLGTQL+LMGWVESKRWVDFFNPDSQSVEWAT
Sbjct: 120  FVGQAWSGVPWFEAGADPNAIAPFSFGTLLGTQLILMGWVESKRWVDFFNPDSQSVEWAT 179

Query: 808  PWSRTAENFANATGDQGYPGGKFFDPLGLAGTIKDGVYIPDREKLERLKLAEIKHARIAM 987
            PWSRT+ENFANATG+QGYPGGKFFDPL LAGTIKDGVYIPD EKLERLKLAEIKHARIAM
Sbjct: 180  PWSRTSENFANATGEQGYPGGKFFDPLSLAGTIKDGVYIPDTEKLERLKLAEIKHARIAM 239

Query: 988  LAMLTFYFEAGQGKTPLGALGL 1053
            LAML FYFEAGQGKTPLGALGL
Sbjct: 240  LAMLIFYFEAGQGKTPLGALGL 261


>gb|AFK41475.1| unknown [Lotus japonicus]
          Length = 260

 Score =  494 bits (1273), Expect = e-137
 Identities = 239/259 (92%), Positives = 250/259 (96%), Gaps = 1/259 (0%)
 Frame = +1

Query: 280  AAATSGAVLNGLGSSFLCGGNRSQTLLLATTVGGKVGASVSPKRLIVAAAAA-PKKSWIP 456
            AAATSGAVLNGLGSSFLCGGNRSQTLL A+  G K GA+VSPKRLIVAAAAA PKKSWIP
Sbjct: 3    AAATSGAVLNGLGSSFLCGGNRSQTLL-ASAAGAKAGAAVSPKRLIVAAAAAAPKKSWIP 61

Query: 457  AVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVG 636
            AVKGGGNL+DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIFVG
Sbjct: 62   AVKGGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVG 121

Query: 637  QAWSGVPWFEAGADPNAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWS 816
            QAWSGVPWFEAGADPNAIAPFSFGSLLGTQL+LMGWVESKRWVDFFNPDSQSVEWATPWS
Sbjct: 122  QAWSGVPWFEAGADPNAIAPFSFGSLLGTQLILMGWVESKRWVDFFNPDSQSVEWATPWS 181

Query: 817  RTAENFANATGDQGYPGGKFFDPLGLAGTIKDGVYIPDREKLERLKLAEIKHARIAMLAM 996
            +TAENFAN TGDQGYPGGKFFDPL LAGT++DGVYIPD+EKLERLKLAEIKHAR+AMLAM
Sbjct: 182  KTAENFANYTGDQGYPGGKFFDPLALAGTLQDGVYIPDKEKLERLKLAEIKHARLAMLAM 241

Query: 997  LTFYFEAGQGKTPLGALGL 1053
            L FYFEAGQGKTPLGALGL
Sbjct: 242  LIFYFEAGQGKTPLGALGL 260


>ref|XP_003531041.1| PREDICTED: chlorophyll a-b binding protein CP24 10A,
            chloroplastic-like isoform 1 [Glycine max]
            gi|356524852|ref|XP_003531042.1| PREDICTED: chlorophyll
            a-b binding protein CP24 10A, chloroplastic-like isoform
            2 [Glycine max]
          Length = 258

 Score =  490 bits (1262), Expect = e-136
 Identities = 235/259 (90%), Positives = 244/259 (94%)
 Frame = +1

Query: 277  MAAATSGAVLNGLGSSFLCGGNRSQTLLLATTVGGKVGASVSPKRLIVAAAAAPKKSWIP 456
            MAAATS AVLNG GS FLCGG RS  LL A ++GGKVGASVSPKR+IVA AAAPKKSWIP
Sbjct: 1    MAAATSSAVLNGFGSHFLCGGKRSHALL-AASIGGKVGASVSPKRVIVAVAAAPKKSWIP 59

Query: 457  AVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVG 636
            AVKGGG+ IDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIF+G
Sbjct: 60   AVKGGGSFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIG 119

Query: 637  QAWSGVPWFEAGADPNAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWS 816
            QAWSGVPWFEAGADPNAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWS
Sbjct: 120  QAWSGVPWFEAGADPNAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWS 179

Query: 817  RTAENFANATGDQGYPGGKFFDPLGLAGTIKDGVYIPDREKLERLKLAEIKHARIAMLAM 996
            +TAENF N+TG+QGYPGGKFFDPLG AG IKDGVYIPD +KLERLKLAEIKHARIAMLAM
Sbjct: 180  KTAENFGNSTGEQGYPGGKFFDPLGFAGAIKDGVYIPDADKLERLKLAEIKHARIAMLAM 239

Query: 997  LTFYFEAGQGKTPLGALGL 1053
            L FYFEAGQGKTPLGALGL
Sbjct: 240  LIFYFEAGQGKTPLGALGL 258


>ref|XP_003524746.1| PREDICTED: LOW QUALITY PROTEIN: chlorophyll a-b binding protein CP24
            10A, chloroplastic-like [Glycine max]
          Length = 258

 Score =  488 bits (1256), Expect = e-135
 Identities = 235/259 (90%), Positives = 241/259 (93%)
 Frame = +1

Query: 277  MAAATSGAVLNGLGSSFLCGGNRSQTLLLATTVGGKVGASVSPKRLIVAAAAAPKKSWIP 456
            MAAATS AVLNG GS FLCGG RS  LL A  +GGKVGA VSP R+IVA AAAPKKSWIP
Sbjct: 1    MAAATSSAVLNGFGSHFLCGGKRSHALL-AAGIGGKVGAVVSPXRVIVAVAAAPKKSWIP 59

Query: 457  AVKGGGNLIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVG 636
            AVKGGGN IDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIF+G
Sbjct: 60   AVKGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFIG 119

Query: 637  QAWSGVPWFEAGADPNAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWS 816
            QAWSGVPWFEAGADPNAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWS
Sbjct: 120  QAWSGVPWFEAGADPNAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPDSQSVEWATPWS 179

Query: 817  RTAENFANATGDQGYPGGKFFDPLGLAGTIKDGVYIPDREKLERLKLAEIKHARIAMLAM 996
            RTAENF N+TG+QGYPGGKFFDPLG AGTIKDGVYIPD +KLERLKL EIKHARIAMLAM
Sbjct: 180  RTAENFGNSTGEQGYPGGKFFDPLGFAGTIKDGVYIPDTDKLERLKLTEIKHARIAMLAM 239

Query: 997  LTFYFEAGQGKTPLGALGL 1053
            L FYFEAGQGKTPLGALGL
Sbjct: 240  LIFYFEAGQGKTPLGALGL 258


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