BLASTX nr result

ID: Glycyrrhiza24_contig00000627 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000627
         (438 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK38409.1| unknown [Medicago truncatula]                          215   3e-54
ref|XP_003629290.1| Ribosomal RNA small subunit methyltransferas...   215   3e-54
ref|NP_001242667.1| uncharacterized protein LOC100788419 [Glycin...   208   3e-52
ref|XP_003631893.1| PREDICTED: uncharacterized protein LOC100267...   184   5e-45
emb|CBI17362.3| unnamed protein product [Vitis vinifera]              184   5e-45

>gb|AFK38409.1| unknown [Medicago truncatula]
          Length = 389

 Score =  215 bits (548), Expect = 3e-54
 Identities = 102/110 (92%), Positives = 107/110 (97%)
 Frame = +3

Query: 3   SVKHIQKFENWGWITLQRRVLDAERTDNLHALQLNLLTNGFRLLKVGGSLVYSTCSLTFA 182
           S+KHIQKFE WGWITLQRRVLDAERTD+LHALQLNLLTNGFRLLKVGGSLVYSTCSLT A
Sbjct: 270 SIKHIQKFEQWGWITLQRRVLDAERTDDLHALQLNLLTNGFRLLKVGGSLVYSTCSLTVA 329

Query: 183 QNEDVVEQFLKENVTAELTEIDAARNWPCKGGRIPKTWRFDPITSQTSGL 332
           QNEDV+EQFLKEN+TAELTEIDAARNWPCKGGRI KTWRFDP+TSQTSGL
Sbjct: 330 QNEDVMEQFLKENITAELTEIDAARNWPCKGGRIRKTWRFDPLTSQTSGL 379


>ref|XP_003629290.1| Ribosomal RNA small subunit methyltransferase, putative [Medicago
           truncatula] gi|355523312|gb|AET03766.1| Ribosomal RNA
           small subunit methyltransferase, putative [Medicago
           truncatula]
          Length = 389

 Score =  215 bits (548), Expect = 3e-54
 Identities = 102/110 (92%), Positives = 107/110 (97%)
 Frame = +3

Query: 3   SVKHIQKFENWGWITLQRRVLDAERTDNLHALQLNLLTNGFRLLKVGGSLVYSTCSLTFA 182
           S+KHIQKFE WGWITLQRRVLDAERTD+LHALQLNLLTNGFRLLKVGGSLVYSTCSLT A
Sbjct: 270 SIKHIQKFEQWGWITLQRRVLDAERTDDLHALQLNLLTNGFRLLKVGGSLVYSTCSLTVA 329

Query: 183 QNEDVVEQFLKENVTAELTEIDAARNWPCKGGRIPKTWRFDPITSQTSGL 332
           QNEDV+EQFLKEN+TAELTEIDAARNWPCKGGRI KTWRFDP+TSQTSGL
Sbjct: 330 QNEDVMEQFLKENITAELTEIDAARNWPCKGGRIRKTWRFDPLTSQTSGL 379


>ref|NP_001242667.1| uncharacterized protein LOC100788419 [Glycine max]
           gi|255642235|gb|ACU21382.1| unknown [Glycine max]
          Length = 392

 Score =  208 bits (530), Expect = 3e-52
 Identities = 100/110 (90%), Positives = 104/110 (94%)
 Frame = +3

Query: 3   SVKHIQKFENWGWITLQRRVLDAERTDNLHALQLNLLTNGFRLLKVGGSLVYSTCSLTFA 182
           SVKHIQKFE+WGW TLQRRVLDAERTD+LH LQLNLLTNGFRLL VGGSLVYSTCSLT A
Sbjct: 273 SVKHIQKFEDWGWGTLQRRVLDAERTDDLHTLQLNLLTNGFRLLNVGGSLVYSTCSLTIA 332

Query: 183 QNEDVVEQFLKENVTAELTEIDAARNWPCKGGRIPKTWRFDPITSQTSGL 332
           QNEDVVEQFLKEN TAELTEIDAA +WPCKGGRIPKTWRFDP+TSQTSGL
Sbjct: 333 QNEDVVEQFLKENETAELTEIDAASDWPCKGGRIPKTWRFDPLTSQTSGL 382


>ref|XP_003631893.1| PREDICTED: uncharacterized protein LOC100267747 [Vitis vinifera]
          Length = 395

 Score =  184 bits (468), Expect = 5e-45
 Identities = 88/110 (80%), Positives = 98/110 (89%)
 Frame = +3

Query: 3   SVKHIQKFENWGWITLQRRVLDAERTDNLHALQLNLLTNGFRLLKVGGSLVYSTCSLTFA 182
           S++HIQKF++WGW TL+RRVLDAERTD+L  LQ  LL+NGFRLLKVGGSLVYSTCSLT A
Sbjct: 276 SIRHIQKFDHWGWETLERRVLDAERTDSLTVLQFRLLSNGFRLLKVGGSLVYSTCSLTAA 335

Query: 183 QNEDVVEQFLKENVTAELTEIDAARNWPCKGGRIPKTWRFDPITSQTSGL 332
           QNEDVVEQFL+EN +AEL EIDAA NWPCK G IPKT RFDP+TSQTSGL
Sbjct: 336 QNEDVVEQFLRENASAELQEIDAATNWPCKSGGIPKTLRFDPLTSQTSGL 385


>emb|CBI17362.3| unnamed protein product [Vitis vinifera]
          Length = 369

 Score =  184 bits (468), Expect = 5e-45
 Identities = 88/110 (80%), Positives = 98/110 (89%)
 Frame = +3

Query: 3   SVKHIQKFENWGWITLQRRVLDAERTDNLHALQLNLLTNGFRLLKVGGSLVYSTCSLTFA 182
           S++HIQKF++WGW TL+RRVLDAERTD+L  LQ  LL+NGFRLLKVGGSLVYSTCSLT A
Sbjct: 250 SIRHIQKFDHWGWETLERRVLDAERTDSLTVLQFRLLSNGFRLLKVGGSLVYSTCSLTAA 309

Query: 183 QNEDVVEQFLKENVTAELTEIDAARNWPCKGGRIPKTWRFDPITSQTSGL 332
           QNEDVVEQFL+EN +AEL EIDAA NWPCK G IPKT RFDP+TSQTSGL
Sbjct: 310 QNEDVVEQFLRENASAELQEIDAATNWPCKSGGIPKTLRFDPLTSQTSGL 359


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