BLASTX nr result

ID: Glycyrrhiza24_contig00000625 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000625
         (1937 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621193.1| ZF-HD homeobox protein [Medicago truncatula]...   244   5e-62
ref|XP_003552526.1| PREDICTED: ZF-HD homeobox protein At4g24660-...   236   2e-59
ref|XP_003543789.1| PREDICTED: ZF-HD homeobox protein At4g24660-...   225   4e-56
ref|XP_002283533.1| PREDICTED: ZF-HD homeobox protein At4g24660-...   222   2e-55
ref|XP_002534012.1| conserved hypothetical protein [Ricinus comm...   217   8e-54

>ref|XP_003621193.1| ZF-HD homeobox protein [Medicago truncatula]
            gi|124359224|gb|ABN05735.1| Homeobox domain, ZF-HD class;
            ZF-HD homeobox protein Cys/His-rich dimerisation region;
            Homeodomain-like [Medicago truncatula]
            gi|124360958|gb|ABN08930.1| Homeobox domain, ZF-HD class;
            ZF-HD homeobox protein Cys/His-rich dimerisation region;
            Homeodomain-like [Medicago truncatula]
            gi|355496208|gb|AES77411.1| ZF-HD homeobox protein
            [Medicago truncatula]
          Length = 341

 Score =  244 bits (624), Expect = 5e-62
 Identities = 145/285 (50%), Positives = 170/285 (59%), Gaps = 5/285 (1%)
 Frame = -2

Query: 1312 VLKRXXXXXXXXXXXXXHPVTVTYKECLKNHAANLGGHALDGCGEFMXXXXXXXXXXXSI 1133
            VLKR             H  T+TYKECLKNHAANLGGHALDGCGEFM           S+
Sbjct: 65   VLKRFHHHHHHFNHHNNHQPTITYKECLKNHAANLGGHALDGCGEFMTSPTATPTDPTSL 124

Query: 1132 KCAACGCHRNFHRREPEEPPISPATHVIEYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 953
            KCAACGCHRNFHRREPEEPP++  THVIEYQ                             
Sbjct: 125  KCAACGCHRNFHRREPEEPPLT-TTHVIEYQPHHRHQPLPPPPFSHRSPNSSSPPPISSS 183

Query: 952  XXXXXXHMLLALSTGIXXXXXXXXXXXXXXHSTAMVSHARKRFRTKFSQEQKEKMQRFAE 773
                  HMLLALS  +                +   +++RKRFRTKF+Q+QK+KM +FAE
Sbjct: 184  YYPSAPHMLLALSAALPENVAAPNQTMLMNSHS---NNSRKRFRTKFTQDQKDKMLKFAE 240

Query: 772  KVGWKMQKRDEDLVQEFCNEVGVDRGVLKVWMHNNKNTSAKKESNDNINSISNTPNNAGA 593
            KVGWKMQK+D++ V EFCNE+GVDR VLKVWMHNNKNT AK+E   NIN  +N   N G 
Sbjct: 241  KVGWKMQKKDDEFVHEFCNEIGVDRSVLKVWMHNNKNTLAKRE---NIN--TNNDINDGV 295

Query: 592  KSF-LALEEDQRINN-NAGGINAEDPSHHYQNDG---GVTVRANG 473
            KSF L LE+++  NN    G+N     +HYQN+G   GVTVRANG
Sbjct: 296  KSFQLPLEDEEHKNNVEIHGLN----HNHYQNEGGVVGVTVRANG 336


>ref|XP_003552526.1| PREDICTED: ZF-HD homeobox protein At4g24660-like [Glycine max]
          Length = 338

 Score =  236 bits (601), Expect = 2e-59
 Identities = 147/283 (51%), Positives = 159/283 (56%), Gaps = 21/283 (7%)
 Frame = -2

Query: 1258 PVTVTYKECLKNHAANLGGHALDGCGEFMXXXXXXXXXXXSIKCAACGCHRNFHRREPEE 1079
            P  VTYKECLKNHAANLGG ALDGCGEFM           SIKCAACGCHRNFHRREPE+
Sbjct: 64   PAVVTYKECLKNHAANLGGLALDGCGEFMPSPTATAADPSSIKCAACGCHRNFHRREPED 123

Query: 1078 PPI-SPATHVIEYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXH--MLLALSTG 908
            PPI S  THVIEYQ                                      MLLALS G
Sbjct: 124  PPITSNTTHVIEYQPHHRHHPPPPLHAAAAARSPNSASPPPISSSYYPSAPHMLLALSAG 183

Query: 907  IXXXXXXXXXXXXXXHSTAMVSHA--RKRFRTKFSQEQKEKMQRFAEKVGWKMQKRDEDL 734
            +               STA  S A  RKRFRTKFSQEQKEKM +FAEKVGWK+QKRDEDL
Sbjct: 184  LAAPPE----------STAAPSAALSRKRFRTKFSQEQKEKMHKFAEKVGWKIQKRDEDL 233

Query: 733  VQEFCNEVGVDRGVLKVWMHNNKNTSAKKESN------------DNINSI---SNTPNNA 599
            + EFCNEVGVDR VLKVWMHNNKNT AKK++N            +NIN+     N  N  
Sbjct: 234  IHEFCNEVGVDRSVLKVWMHNNKNTFAKKDNNIVISNDINITTSNNINTSIIDDNDANGG 293

Query: 598  GAKSFLALEEDQRINNNAGGINAEDPS-HHYQNDGGVTVRANG 473
              K F     +    +  G   AEDPS +HY   GGV V ANG
Sbjct: 294  DVKVFENPNNNHGSGSGGGEDPAEDPSRNHY---GGVNVGANG 333


>ref|XP_003543789.1| PREDICTED: ZF-HD homeobox protein At4g24660-like [Glycine max]
          Length = 331

 Score =  225 bits (573), Expect = 4e-56
 Identities = 134/273 (49%), Positives = 154/273 (56%), Gaps = 21/273 (7%)
 Frame = -2

Query: 1249 VTYKECLKNHAANLGGHALDGCGEFMXXXXXXXXXXXSIKCAACGCHRNFHRREPEEPPI 1070
            V YKECLKNH A+LGGHALDGCGEFM           SIKCAACGCHRNFHRREPEE PI
Sbjct: 57   VVYKECLKNHVASLGGHALDGCGEFMPSPAATADDPSSIKCAACGCHRNFHRREPEESPI 116

Query: 1069 SPATH-VIEYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHMLLALSTGIXXXX 893
            SPATH V+EY+                                    MLLALS G     
Sbjct: 117  SPATHHVLEYRPHHRHHPPPPHRSPNSASPPPISSYPSAPH------MLLALSGGAGLSV 170

Query: 892  XXXXXXXXXXHSTAMVSHARKRFRTKFSQEQKEKMQRFAEKVGWKMQKRDEDLVQEFCNE 713
                       + A   H+RKRFRTKF+QEQKEKM  FA+KVGWKMQ+RDE++V EFCNE
Sbjct: 171  APENTA-----APAPPHHSRKRFRTKFTQEQKEKMHEFADKVGWKMQRRDEEMVMEFCNE 225

Query: 712  VGVDRGVLKVWMHNNKNTSAKKESNDNINSISNTP-------------NNAGAKSFLALE 572
            +GVDRGVLKVWMHNNKNT AKK+ N N NSI N                +A  +S + + 
Sbjct: 226  IGVDRGVLKVWMHNNKNTFAKKD-NLNGNSIGNVAIVSANGVAPIGAVGSATVRSSVHVH 284

Query: 571  EDQR--INNNAGGINAEDP-----SHHYQNDGG 494
            E +   IN N  G N  +P      + Y+ND G
Sbjct: 285  EHEHGGINGNGSGDNNHNPLGSRDVNEYENDSG 317


>ref|XP_002283533.1| PREDICTED: ZF-HD homeobox protein At4g24660-like [Vitis vinifera]
          Length = 341

 Score =  222 bits (566), Expect = 2e-55
 Identities = 126/252 (50%), Positives = 145/252 (57%), Gaps = 1/252 (0%)
 Frame = -2

Query: 1255 VTVTYKECLKNHAANLGGHALDGCGEFMXXXXXXXXXXXSIKCAACGCHRNFHRREPEEP 1076
            V V YKECLKNHAA+LGGHALDGCGEFM           S+KCAACGCHRNFHRREP++P
Sbjct: 69   VVVAYKECLKNHAASLGGHALDGCGEFMPSPTATSADPTSLKCAACGCHRNFHRREPDDP 128

Query: 1075 PISPATHVIEYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHMLLALSTGIXXX 896
            P  P THVIEYQ                                    MLLALS GI   
Sbjct: 129  P--PTTHVIEYQPHHRHQPPPPPPRPRSPNSPSPPPISSSYYPSAPH-MLLALSAGISGP 185

Query: 895  XXXXXXXXXXXHSTAMVSHARKRFRTKFSQEQKEKMQRFAEKVGWKMQKRDEDLVQEFCN 716
                        S A  ++ RKRFRTKFSQ QKEKM  FAE+VGWKMQKRDE+LV EFCN
Sbjct: 186  PENAPPISS---SPASGANGRKRFRTKFSQGQKEKMFEFAERVGWKMQKRDEELVAEFCN 242

Query: 715  EVGVDRGVLKVWMHNNKNTSAKKESNDNINSI-SNTPNNAGAKSFLALEEDQRINNNAGG 539
            EVGVD+GVLKVWMHNNKNT  K++ N +  S+  N  NN   ++    E ++   NN   
Sbjct: 243  EVGVDKGVLKVWMHNNKNTFGKRDVNGSRTSLDDNNENNENNENTENTETNETNENNDNT 302

Query: 538  INAEDPSHHYQN 503
             +  +  HH  N
Sbjct: 303  PHTMETIHHTPN 314


>ref|XP_002534012.1| conserved hypothetical protein [Ricinus communis]
            gi|223525985|gb|EEF28370.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 335

 Score =  217 bits (553), Expect = 8e-54
 Identities = 131/277 (47%), Positives = 148/277 (53%), Gaps = 15/277 (5%)
 Frame = -2

Query: 1258 PVTVTYKECLKNHAANLGGHALDGCGEFMXXXXXXXXXXXSIKCAACGCHRNFHRREPEE 1079
            PV +TYKECLKNHAA LGGHALDGCGEFM           S+KCAACGCHRNFHRREPE+
Sbjct: 70   PVVITYKECLKNHAATLGGHALDGCGEFMPSPTATHTDPTSLKCAACGCHRNFHRREPED 129

Query: 1078 --PPISPATH--------VIEYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXH- 932
              PP  P  H         IEYQ                                     
Sbjct: 130  SPPPHHPHPHHHPVNTTTTIEYQPHHRHHPPPPPPQAAQPYRSPNSASPPPISSSYPSAP 189

Query: 931  -MLLALSTGIXXXXXXXXXXXXXXHSTAMVSHARKRFRTKFSQEQKEKMQRFAEKVGWKM 755
             MLLALS G+               S       RKRFRTKFSQ QKE+M  FAE+VGWKM
Sbjct: 190  HMLLALSGGVNENSGLHIGGGGGGSS------GRKRFRTKFSQTQKERMHEFAERVGWKM 243

Query: 754  QKRDEDLVQEFCNEVGVDRGVLKVWMHNNKNTSAKKESN-DNINSISNTPNNAGAKSFLA 578
            QKRDE+LVQEFCNEVGVD+GVLKVWMHNNKNT A++++N  N NSI  +           
Sbjct: 244  QKRDEELVQEFCNEVGVDKGVLKVWMHNNKNTFARRDANGHNGNSIDRS----------N 293

Query: 577  LEEDQRINNNAGGINAEDPSH--HYQNDGGVTVRANG 473
            L++D   NNN    N     H  H++ND    V  NG
Sbjct: 294  LDQDIHDNNNNSSENVNHRHHHQHFENDSVAHVATNG 330


Top