BLASTX nr result

ID: Glycyrrhiza24_contig00000609 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000609
         (888 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235236.1| uncharacterized protein LOC100499731 [Glycin...   183   4e-44
gb|AFK41521.1| unknown [Lotus japonicus]                              183   5e-44
ref|NP_001235620.1| uncharacterized protein LOC100305966 [Glycin...   181   2e-43
ref|XP_003613080.1| Glutamyl-tRNA synthetase [Medicago truncatul...   172   1e-40
ref|XP_003635047.1| PREDICTED: uncharacterized protein LOC100853...   141   2e-31

>ref|NP_001235236.1| uncharacterized protein LOC100499731 [Glycine max]
           gi|255626121|gb|ACU13405.1| unknown [Glycine max]
          Length = 197

 Score =  183 bits (465), Expect = 4e-44
 Identities = 108/194 (55%), Positives = 123/194 (63%), Gaps = 19/194 (9%)
 Frame = -2

Query: 812 TLSKLPNTTLLL-----KPSLPLRKTPITPSASLLSRSICLRNVLLKAXXXXXXXSGASK 648
           TLS LPN +  L     KPSLP  +TP+T SA LLSRSICLRN+L KA       +G S+
Sbjct: 4   TLSNLPNASSFLPKPKPKPSLPHPQTPLTHSAVLLSRSICLRNLLPKAMSSEERSTGGSQ 63

Query: 647 VFGEKRDGAIIVDN--------------EDPKEEXXXXXXXXXXXXXXXXXXXXXXXXTG 510
            F EKRDG II++N              ED KEE                         G
Sbjct: 64  FFNEKRDGVIILENVKEDNKNEFDKTVIEDTKEEELSDDGQGLSFDLMDKLNFDTDDT-G 122

Query: 509 SLVLYGGGAIAALWLTSAVIGAIDSIPVFPKLLEVVGLGYTLWFSSRYLLFKKNRDELAA 330
           S+VLYGGGA+ ALWLTSAVIGAIDSIP+ PKLLEVVGL YT+WF+SRYLLFK+NRDEL A
Sbjct: 123 SIVLYGGGALVALWLTSAVIGAIDSIPLIPKLLEVVGLAYTVWFTSRYLLFKQNRDELGA 182

Query: 329 KIEELKEQVLGSED 288
           KIEELK Q+ GSED
Sbjct: 183 KIEELKGQIFGSED 196


>gb|AFK41521.1| unknown [Lotus japonicus]
          Length = 199

 Score =  183 bits (464), Expect = 5e-44
 Identities = 110/201 (54%), Positives = 130/201 (64%), Gaps = 17/201 (8%)
 Frame = -2

Query: 839 MGHCTVQPFTLSKLPN-TTLLLKPSLPLRK-TPITPSASLLSRSICLRNVLLKAXXXXXX 666
           MG  T+ P  LSKLP  +T L KP LP R+ T ITPSA+LLSRSI +RN+L +A      
Sbjct: 1   MGLTTLHPIPLSKLPTVSTFLPKPFLPPRQQTLITPSAALLSRSIFVRNLLTRATSSDET 60

Query: 665 XSGASKVFGEKRDGAIIVDN---------------EDPKEEXXXXXXXXXXXXXXXXXXX 531
             G+S  +GEKRDG +I+D+               +DPKEE                   
Sbjct: 61  S-GSSSFYGEKRDGVVILDDVKGAGENGFSETVVSQDPKEEVPVDEQAFALLDDLNMKLD 119

Query: 530 XXXXXTGSLVLYGGGAIAALWLTSAVIGAIDSIPVFPKLLEVVGLGYTLWFSSRYLLFKK 351
                 GS+VLYG GA+ ALWL SAVIGAIDSIP+FPKLLEVVGL YT+WF++RYLLFKK
Sbjct: 120 LNDT--GSIVLYGSGAVVALWLLSAVIGAIDSIPLFPKLLEVVGLSYTVWFTTRYLLFKK 177

Query: 350 NRDELAAKIEELKEQVLGSED 288
           NRDEL AKIEELKEQV+GSED
Sbjct: 178 NRDELGAKIEELKEQVIGSED 198


>ref|NP_001235620.1| uncharacterized protein LOC100305966 [Glycine max]
           gi|255627137|gb|ACU13913.1| unknown [Glycine max]
          Length = 200

 Score =  181 bits (460), Expect = 2e-43
 Identities = 110/203 (54%), Positives = 128/203 (63%), Gaps = 19/203 (9%)
 Frame = -2

Query: 839 MGHCTVQPFTLSKLPNTTLLL---KPSLPLRKTPITPSASLLSRSICLRNVLLKAXXXXX 669
           MG CTVQP TLSKLPN +  L   KPSLP      TPSA+ LSRS+CLRN+  KA     
Sbjct: 1   MGLCTVQPITLSKLPNASSFLPKPKPSLP---QSYTPSAAHLSRSVCLRNLSPKATSSEE 57

Query: 668 XXS-GASKVFGEKRDGAIIVDN---------------EDPKEEXXXXXXXXXXXXXXXXX 537
             S G S+ F EKRDG II+++               ED K++                 
Sbjct: 58  ERSSGGSQFFNEKRDGVIILEDVKEDNNKNEFDKTVIEDTKQDLFDDDGQGLSFDLLDKL 117

Query: 536 XXXXXXXTGSLVLYGGGAIAALWLTSAVIGAIDSIPVFPKLLEVVGLGYTLWFSSRYLLF 357
                   GS+V+YGGGA+ ALWLTSAVIGAIDSIP+FPKLLEVVGL YT+WF+SRYLLF
Sbjct: 118 NFDTDDT-GSIVVYGGGALVALWLTSAVIGAIDSIPLFPKLLEVVGLAYTVWFTSRYLLF 176

Query: 356 KKNRDELAAKIEELKEQVLGSED 288
           K+NRDEL AKIEELK Q+ GSED
Sbjct: 177 KQNRDELGAKIEELKGQIFGSED 199


>ref|XP_003613080.1| Glutamyl-tRNA synthetase [Medicago truncatula]
           gi|355514415|gb|AES96038.1| Glutamyl-tRNA synthetase
           [Medicago truncatula] gi|388495348|gb|AFK35740.1|
           unknown [Medicago truncatula]
          Length = 182

 Score =  172 bits (435), Expect = 1e-40
 Identities = 105/193 (54%), Positives = 118/193 (61%), Gaps = 12/193 (6%)
 Frame = -2

Query: 839 MGHCTVQPFTLSKLPNTTLLL-KPSLPLRKTPITPSASLLSRSICLRNVLLKAXXXXXXX 663
           MGHCTVQP TLSKLPN+     KPS P       P  +LLSRS  LRNV  +A       
Sbjct: 1   MGHCTVQPLTLSKLPNSFAFHHKPSFP-------PKHALLSRSAFLRNV--RATASEENP 51

Query: 662 SGASKVFGEKRDGAII-----------VDNEDPKEEXXXXXXXXXXXXXXXXXXXXXXXX 516
           SGA K+F EKRDG I            V+NEDPKE                         
Sbjct: 52  SGAGKLFNEKRDGVITLEADKNGYNETVENEDPKEVLPDGEGLPLELLDKLNFDINDTT- 110

Query: 515 TGSLVLYGGGAIAALWLTSAVIGAIDSIPVFPKLLEVVGLGYTLWFSSRYLLFKKNRDEL 336
             SL +YGGGAI ALWLTSA++GA+DSIPV PKL EVVGLGY+LWF+ RYLLFK+NR+EL
Sbjct: 111 --SLAVYGGGAIVALWLTSAIVGAVDSIPVIPKLFEVVGLGYSLWFTYRYLLFKRNREEL 168

Query: 335 AAKIEELKEQVLG 297
           A KIEELKEQVLG
Sbjct: 169 ANKIEELKEQVLG 181


>ref|XP_003635047.1| PREDICTED: uncharacterized protein LOC100853187 isoform 1 [Vitis
           vinifera] gi|359495655|ref|XP_003635048.1| PREDICTED:
           uncharacterized protein LOC100853187 isoform 2 [Vitis
           vinifera] gi|297735931|emb|CBI18707.3| unnamed protein
           product [Vitis vinifera]
          Length = 204

 Score =  141 bits (355), Expect = 2e-31
 Identities = 78/176 (44%), Positives = 106/176 (60%), Gaps = 15/176 (8%)
 Frame = -2

Query: 770 SLPLRKTPITPSASLLSRSICLRNVLLKAXXXXXXXSGASKVFGEKRDGAIIVDN----- 606
           S+P +++PI+ ++     S+   N LL+A       SGA + FGE+RD  +++++     
Sbjct: 31  SIPFKQSPISRTSP---GSLYFNNPLLRASISEGSSSGADQYFGEERDSVLVMEDIPATE 87

Query: 605 ----------EDPKEEXXXXXXXXXXXXXXXXXXXXXXXXTGSLVLYGGGAIAALWLTSA 456
                     E P E+                          S+ LYG GA+ ALW  SA
Sbjct: 88  ENVYNEVIPTEAPIEDSQVEEQTVAFEFLDNLNIKFDSEDPYSIFLYGTGALTALWFASA 147

Query: 455 VIGAIDSIPVFPKLLEVVGLGYTLWFSSRYLLFKKNRDELAAKIEELKEQVLGSED 288
           ++GAIDSIP+FPKL+E+VGLGYTLWFS+RYL+FK+NRDELAAKIEELK+QVLGSED
Sbjct: 148 IVGAIDSIPIFPKLMEIVGLGYTLWFSARYLIFKQNRDELAAKIEELKQQVLGSED 203


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