BLASTX nr result

ID: Glycyrrhiza24_contig00000603 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000603
         (1086 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK35788.1| unknown [Lotus japonicus]                              387   e-105
gb|ACJ83977.1| unknown [Medicago truncatula] gi|388517557|gb|AFK...   367   4e-99
gb|AFK33917.1| unknown [Medicago truncatula]                          363   3e-98
ref|NP_001235835.1| uncharacterized protein LOC100305981 [Glycin...   356   6e-96
ref|XP_002532120.1| 50S ribosomal protein L13, putative [Ricinus...   310   5e-82

>gb|AFK35788.1| unknown [Lotus japonicus]
          Length = 248

 Score =  387 bits (993), Expect = e-105
 Identities = 198/252 (78%), Positives = 211/252 (83%), Gaps = 10/252 (3%)
 Frame = +2

Query: 86  MALLCGSASVTFPSTSFPPHSHRTATTKSSFVGSQXXXXXXXXXXXXIRTHFPAPFRVRS 265
           MA LCG+ASVTFPS SFP  SH+ +TTKSSF G Q            IRTHF A  RV  
Sbjct: 1   MASLCGAASVTFPSPSFP--SHKISTTKSSFGGFQLPPPKLSSSS--IRTHFTATLRVHC 56

Query: 266 QQDTSLVQE----------DPRFIFVEPEPRFKGPDIWNKTWYPKAEDHVNTEKTWYIVD 415
           QQ+TSLV E          DPRF+ VEPEPRFKGPDIWNKT+YPKA DHVNTEKTWY+VD
Sbjct: 57  QQETSLVTEEQSPVVAVEQDPRFMCVEPEPRFKGPDIWNKTYYPKAADHVNTEKTWYVVD 116

Query: 416 ATDKILGRLASTIAIHIRGKNLMTYTPSVDMGAFVIVVNAEKVAVTGKKRTQKIYRRHSG 595
           ATDK+LGRLASTIAIHIRGKNLMTYTPSVDMGAFVIVVNAEKVAV+GKKRTQK+YRRHSG
Sbjct: 117 ATDKVLGRLASTIAIHIRGKNLMTYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSG 176

Query: 596 RPGGMTEETFSQLQNRIPERIIEHAVRGMLPKGRLGRRLFTHLKVYSGPDHPHAAQKPVE 775
           RPGGM  ETFSQLQNRIPERIIEHAVRGMLPKGRLGR LFTHLKVY GPDHPHAAQKPV+
Sbjct: 177 RPGGMKVETFSQLQNRIPERIIEHAVRGMLPKGRLGRDLFTHLKVYKGPDHPHAAQKPVD 236

Query: 776 LPIRDKRIQLKK 811
           LPIRDKRI+LK+
Sbjct: 237 LPIRDKRIELKR 248


>gb|ACJ83977.1| unknown [Medicago truncatula] gi|388517557|gb|AFK46840.1| unknown
           [Medicago truncatula]
          Length = 240

 Score =  367 bits (941), Expect = 4e-99
 Identities = 185/244 (75%), Positives = 206/244 (84%), Gaps = 2/244 (0%)
 Frame = +2

Query: 86  MALLCGSASVTFPSTSFPPHSHRTATTKSSFVGSQXXXXXXXXXXXXIRTHFPAPFRVRS 265
           M+LLCGS SVTFPS+S   H H+ +T+KSSF+ SQ            IR+     F V S
Sbjct: 1   MSLLCGSPSVTFPSSSSFSH-HKNSTSKSSFLSSQLPLSNLSLSSSSIRS---PSFIVHS 56

Query: 266 QQDTSLV--QEDPRFIFVEPEPRFKGPDIWNKTWYPKAEDHVNTEKTWYIVDATDKILGR 439
           QQ+TS+V  +EDPRFI VEPEPR +GPDIWN TWYPKA DHVNTEKTWYIVDATDKILGR
Sbjct: 57  QQETSIVAEEEDPRFICVEPEPRLQGPDIWNTTWYPKASDHVNTEKTWYIVDATDKILGR 116

Query: 440 LASTIAIHIRGKNLMTYTPSVDMGAFVIVVNAEKVAVTGKKRTQKIYRRHSGRPGGMTEE 619
           LASTIA HIRGKNL+TYTPSVDMG+FVIV+NAEKVAV+GKKRTQK+YRRHSGRPGGMT E
Sbjct: 117 LASTIANHIRGKNLVTYTPSVDMGSFVIVINAEKVAVSGKKRTQKLYRRHSGRPGGMTVE 176

Query: 620 TFSQLQNRIPERIIEHAVRGMLPKGRLGRRLFTHLKVYSGPDHPHAAQKPVELPIRDKRI 799
           TF QLQNRIPERIIEHAVRGMLPKGRLGR LFT LKVYSGPDHPH AQ+P++LPIRDKRI
Sbjct: 177 TFDQLQNRIPERIIEHAVRGMLPKGRLGRTLFTRLKVYSGPDHPHEAQQPIDLPIRDKRI 236

Query: 800 QLKK 811
           QL++
Sbjct: 237 QLQR 240


>gb|AFK33917.1| unknown [Medicago truncatula]
          Length = 240

 Score =  363 bits (933), Expect = 3e-98
 Identities = 183/244 (75%), Positives = 205/244 (84%), Gaps = 2/244 (0%)
 Frame = +2

Query: 86  MALLCGSASVTFPSTSFPPHSHRTATTKSSFVGSQXXXXXXXXXXXXIRTHFPAPFRVRS 265
           M+LLCG  +VTFPS+S   H H+ +T+KSSF+ SQ            IR+     F V S
Sbjct: 1   MSLLCGPPTVTFPSSSSFSH-HKNSTSKSSFLSSQLPLSNLSLSSSSIRS---PSFIVHS 56

Query: 266 QQDTSLV--QEDPRFIFVEPEPRFKGPDIWNKTWYPKAEDHVNTEKTWYIVDATDKILGR 439
           QQ+TS+V  +EDPRFI VEPEPRF+GPDIWN TWYPKA DHVNTEK WYIVDATDKILGR
Sbjct: 57  QQETSIVAEEEDPRFICVEPEPRFQGPDIWNTTWYPKASDHVNTEKPWYIVDATDKILGR 116

Query: 440 LASTIAIHIRGKNLMTYTPSVDMGAFVIVVNAEKVAVTGKKRTQKIYRRHSGRPGGMTEE 619
           LASTIA HIRGKNL+TYTPSVDMG+FVIV+NAEKVAV+GKKRTQK+YRRHSGRPGGMT E
Sbjct: 117 LASTIANHIRGKNLVTYTPSVDMGSFVIVINAEKVAVSGKKRTQKLYRRHSGRPGGMTVE 176

Query: 620 TFSQLQNRIPERIIEHAVRGMLPKGRLGRRLFTHLKVYSGPDHPHAAQKPVELPIRDKRI 799
           TF QLQNRIPERIIEHAVRGMLPKGRLGR LFT LKVYSGPDHPH AQ+P++LPIRDKRI
Sbjct: 177 TFDQLQNRIPERIIEHAVRGMLPKGRLGRTLFTRLKVYSGPDHPHEAQQPIDLPIRDKRI 236

Query: 800 QLKK 811
           QL++
Sbjct: 237 QLQR 240


>ref|NP_001235835.1| uncharacterized protein LOC100305981 [Glycine max]
           gi|255627177|gb|ACU13933.1| unknown [Glycine max]
          Length = 236

 Score =  356 bits (913), Expect = 6e-96
 Identities = 184/242 (76%), Positives = 198/242 (81%), Gaps = 8/242 (3%)
 Frame = +2

Query: 86  MALLCGSASVTFPSTSFPPHSHR----TATTKSSFVGSQXXXXXXXXXXXXIRTHFPAPF 253
           MALLCGS SVT      P  SH+    T + KSSFVG Q            +RT  PA  
Sbjct: 1   MALLCGSTSVT------PFLSHKNVGFTTSAKSSFVGFQLPLPKLTLSSS-VRTLLPATS 53

Query: 254 RVRSQQDTSLV----QEDPRFIFVEPEPRFKGPDIWNKTWYPKAEDHVNTEKTWYIVDAT 421
           RVR QQ+++ V    +EDPRF  VEPEPRFKGPDIWNK+WYPKA DHVNTEKTWY+VDAT
Sbjct: 54  RVRCQQESTTVTPVAEEDPRFACVEPEPRFKGPDIWNKSWYPKAADHVNTEKTWYVVDAT 113

Query: 422 DKILGRLASTIAIHIRGKNLMTYTPSVDMGAFVIVVNAEKVAVTGKKRTQKIYRRHSGRP 601
           DK+LGRLASTIAIHIRGKNL TYTPSVDMGAFVIVVNAEKVAV+GKKRTQK+YRRHSGRP
Sbjct: 114 DKVLGRLASTIAIHIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRP 173

Query: 602 GGMTEETFSQLQNRIPERIIEHAVRGMLPKGRLGRRLFTHLKVYSGPDHPHAAQKPVELP 781
           GGMT ETF+QLQNRIPERIIEHAVRGMLPKGRLGRRLFTHLKVY GPDHPHAAQKPVELP
Sbjct: 174 GGMTVETFAQLQNRIPERIIEHAVRGMLPKGRLGRRLFTHLKVYKGPDHPHAAQKPVELP 233

Query: 782 IR 787
           I+
Sbjct: 234 IK 235


>ref|XP_002532120.1| 50S ribosomal protein L13, putative [Ricinus communis]
           gi|223528200|gb|EEF30260.1| 50S ribosomal protein L13,
           putative [Ricinus communis]
          Length = 245

 Score =  310 bits (793), Expect = 5e-82
 Identities = 167/250 (66%), Positives = 185/250 (74%), Gaps = 8/250 (3%)
 Frame = +2

Query: 86  MALLCGSASVTFPSTSFPPHSHRTATTKSSFVGSQXXXXXXXXXXXXIRTHFPAP----F 253
           MA LC  +S+T  S+S    S  TA+T      +             +RT F A     F
Sbjct: 1   MAFLCAPSSITLSSSS---SSSSTASTTQRPYTTFIAGSSLLKSKPSVRTSFSASCSRSF 57

Query: 254 RVRSQQ-DTSLVQE---DPRFIFVEPEPRFKGPDIWNKTWYPKAEDHVNTEKTWYIVDAT 421
            V S++ D  +V     D R++F E E    GPDIWNKTWYPKA DHVNTEK WY+VDAT
Sbjct: 58  TVLSEKTDKKVVPHVPVDQRWMFEEFE--LNGPDIWNKTWYPKAADHVNTEKPWYVVDAT 115

Query: 422 DKILGRLASTIAIHIRGKNLMTYTPSVDMGAFVIVVNAEKVAVTGKKRTQKIYRRHSGRP 601
           DKILGRLASTIAI+IRGKNL TYTPSVDMGAFVIVVNAEKVAV+GKKRTQK+YRRHSGRP
Sbjct: 116 DKILGRLASTIAIYIRGKNLATYTPSVDMGAFVIVVNAEKVAVSGKKRTQKLYRRHSGRP 175

Query: 602 GGMTEETFSQLQNRIPERIIEHAVRGMLPKGRLGRRLFTHLKVYSGPDHPHAAQKPVELP 781
           GGM  ETF QLQ RIPERIIEHAVRGMLPKGRLGR LF HLKVY GPDHPH AQKP+ELP
Sbjct: 176 GGMKVETFDQLQQRIPERIIEHAVRGMLPKGRLGRALFNHLKVYKGPDHPHEAQKPIELP 235

Query: 782 IRDKRIQLKK 811
           IRDKRIQ++K
Sbjct: 236 IRDKRIQIQK 245


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