BLASTX nr result

ID: Glycyrrhiza24_contig00000587 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000587
         (548 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588939.1| 50S ribosomal protein L33 [Medicago truncatu...   115   3e-24
ref|XP_003544621.1| PREDICTED: 50S ribosomal protein L33-like [G...   114   8e-24
ref|XP_004135554.1| PREDICTED: 50S ribosomal protein L33-like [C...   104   8e-21
gb|ADR71262.1| 50S ribosomal protein L33A [Hevea brasiliensis]         98   7e-19
emb|CBI26135.3| unnamed protein product [Vitis vinifera]               94   1e-17

>ref|XP_003588939.1| 50S ribosomal protein L33 [Medicago truncatula]
           gi|355477987|gb|AES59190.1| 50S ribosomal protein L33
           [Medicago truncatula]
          Length = 57

 Score =  115 bits (289), Expect = 3e-24
 Identities = 56/57 (98%), Positives = 56/57 (98%)
 Frame = +2

Query: 140 MGNQKKKAQMFVKLVSAAGTGFFYVKRKPRQFTEKLEFRKYDPRVNRHVLFTEAKMK 310
           MGN KKKAQMFVKLVSAAGTGFFYVKRKPRQFTEKLEFRKYDPRVNRHVLFTEAKMK
Sbjct: 1   MGNAKKKAQMFVKLVSAAGTGFFYVKRKPRQFTEKLEFRKYDPRVNRHVLFTEAKMK 57


>ref|XP_003544621.1| PREDICTED: 50S ribosomal protein L33-like [Glycine max]
           gi|356563842|ref|XP_003550167.1| PREDICTED: 50S
           ribosomal protein L33-like [Glycine max]
           gi|255646477|gb|ACU23717.1| unknown [Glycine max]
          Length = 57

 Score =  114 bits (286), Expect = 8e-24
 Identities = 55/57 (96%), Positives = 57/57 (100%)
 Frame = +2

Query: 140 MGNQKKKAQMFVKLVSAAGTGFFYVKRKPRQFTEKLEFRKYDPRVNRHVLFTEAKMK 310
           MG++KKKAQMFVKLVSAAGTGFFYVKRKPRQFTEKLEFRKYDPRVNRHVLFTEAKMK
Sbjct: 1   MGDKKKKAQMFVKLVSAAGTGFFYVKRKPRQFTEKLEFRKYDPRVNRHVLFTEAKMK 57


>ref|XP_004135554.1| PREDICTED: 50S ribosomal protein L33-like [Cucumis sativus]
           gi|449488522|ref|XP_004158068.1| PREDICTED: 50S
           ribosomal protein L33-like [Cucumis sativus]
          Length = 57

 Score =  104 bits (260), Expect = 8e-21
 Identities = 49/57 (85%), Positives = 54/57 (94%)
 Frame = +2

Query: 140 MGNQKKKAQMFVKLVSAAGTGFFYVKRKPRQFTEKLEFRKYDPRVNRHVLFTEAKMK 310
           MG++KKKA MF++LVSAAGTGFFYVKRKP + TEKLEFRKYDPRVNRHVLFTEAKMK
Sbjct: 1   MGDKKKKATMFIRLVSAAGTGFFYVKRKPTKITEKLEFRKYDPRVNRHVLFTEAKMK 57


>gb|ADR71262.1| 50S ribosomal protein L33A [Hevea brasiliensis]
          Length = 62

 Score = 98.2 bits (243), Expect = 7e-19
 Identities = 48/59 (81%), Positives = 54/59 (91%), Gaps = 1/59 (1%)
 Frame = +2

Query: 137 GMGNQKKKAQMFVKLVSAAGTGFFYVKRKP-RQFTEKLEFRKYDPRVNRHVLFTEAKMK 310
           GMG++KKK  MF++LVSAAGTGFFYVKRK  ++ TEKLEFRKYDPRVNRHVLFTEAKMK
Sbjct: 4   GMGDKKKKTFMFIRLVSAAGTGFFYVKRKSFKKITEKLEFRKYDPRVNRHVLFTEAKMK 62


>emb|CBI26135.3| unnamed protein product [Vitis vinifera]
          Length = 101

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 47/60 (78%), Positives = 55/60 (91%), Gaps = 2/60 (3%)
 Frame = +2

Query: 137 GMGNQKKKA-QMFVKLVSAAGTGFFYVKRK-PRQFTEKLEFRKYDPRVNRHVLFTEAKMK 310
           GMG++KKKA  +F++LVS+AGTGFFYVK+K PR+  EKLEFRKYDPRVNRHVLFTEAKMK
Sbjct: 42  GMGDKKKKAASIFIRLVSSAGTGFFYVKKKNPRKMLEKLEFRKYDPRVNRHVLFTEAKMK 101


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