BLASTX nr result

ID: Glycyrrhiza24_contig00000564 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000564
         (740 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235493.1| uncharacterized protein LOC100499749 [Glycin...   217   2e-54
ref|XP_003549910.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   213   3e-53
ref|XP_003608732.1| hypothetical protein MTR_4g101140 [Medicago ...   212   6e-53
ref|XP_004147198.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1...   212   7e-53
ref|XP_002329914.1| predicted protein [Populus trichocarpa] gi|2...   211   1e-52

>ref|NP_001235493.1| uncharacterized protein LOC100499749 [Glycine max]
           gi|255626255|gb|ACU13472.1| unknown [Glycine max]
          Length = 125

 Score =  217 bits (552), Expect = 2e-54
 Identities = 105/125 (84%), Positives = 109/125 (87%)
 Frame = -2

Query: 643 MAGRLTNAASRILGGNGVVHRSVASSLRLRSGMGLPVGKHIVPDKPLSVNDELIWDNGTP 464
           MAGRLTNAASRILGGNGVV+RSVASSLRLRSGMGLPVGKH VPDKPL +N+EL+WDNGT 
Sbjct: 1   MAGRLTNAASRILGGNGVVYRSVASSLRLRSGMGLPVGKHYVPDKPLPMNEELLWDNGTA 60

Query: 463 FPEPCIDRIADTVGKYEALGWLCXXXXXXXXXXXXAVWNDKASKIPFTPKVYPYDNLRVE 284
           FPEPCIDRIADTVGKYEAL WLC            AVWNDKASKIPFTPKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLSFFASLGLLAVWNDKASKIPFTPKVYPYDNLRVE 120

Query: 283 LGGEP 269
           LGGEP
Sbjct: 121 LGGEP 125


>ref|XP_003549910.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 8, mitochondrial-like [Glycine max]
          Length = 125

 Score =  213 bits (542), Expect = 3e-53
 Identities = 103/125 (82%), Positives = 107/125 (85%)
 Frame = -2

Query: 643 MAGRLTNAASRILGGNGVVHRSVASSLRLRSGMGLPVGKHIVPDKPLSVNDELIWDNGTP 464
           MAGRLTNAASRILGGNGVV+RSVASSLRLRSGMGLPVGKH VPDKPL +N+EL+WDNGT 
Sbjct: 1   MAGRLTNAASRILGGNGVVYRSVASSLRLRSGMGLPVGKHYVPDKPLPMNEELLWDNGTA 60

Query: 463 FPEPCIDRIADTVGKYEALGWLCXXXXXXXXXXXXAVWNDKASKIPFTPKVYPYDNLRVE 284
           FPEPCIDRIADTVGKYEAL WLC            AVWNDKASK PF PKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLSFFASLGLLAVWNDKASKTPFAPKVYPYDNLRVE 120

Query: 283 LGGEP 269
           LGGEP
Sbjct: 121 LGGEP 125


>ref|XP_003608732.1| hypothetical protein MTR_4g101140 [Medicago truncatula]
           gi|355509787|gb|AES90929.1| hypothetical protein
           MTR_4g101140 [Medicago truncatula]
           gi|388495922|gb|AFK36027.1| unknown [Medicago
           truncatula]
          Length = 125

 Score =  212 bits (540), Expect = 6e-53
 Identities = 102/125 (81%), Positives = 106/125 (84%)
 Frame = -2

Query: 643 MAGRLTNAASRILGGNGVVHRSVASSLRLRSGMGLPVGKHIVPDKPLSVNDELIWDNGTP 464
           MAGRLTN AS+ILGGNGVVHRSVASSLRLRSGMGLPVGKH VP+KPL +N+EL WDNGTP
Sbjct: 1   MAGRLTNVASQILGGNGVVHRSVASSLRLRSGMGLPVGKHYVPNKPLPMNEELTWDNGTP 60

Query: 463 FPEPCIDRIADTVGKYEALGWLCXXXXXXXXXXXXAVWNDKASKIPFTPKVYPYDNLRVE 284
           FPEPCIDRIADTVGKYEAL WLC            AVWNDKASK PF PKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLSCFAGLGLLAVWNDKASKTPFAPKVYPYDNLRVE 120

Query: 283 LGGEP 269
           LGGEP
Sbjct: 121 LGGEP 125


>ref|XP_004147198.1| PREDICTED: NADH dehydrogenase [ubiquinone] 1 beta subcomplex
           subunit 8, mitochondrial-like [Cucumis sativus]
           gi|449519396|ref|XP_004166721.1| PREDICTED: NADH
           dehydrogenase [ubiquinone] 1 beta subcomplex subunit 8,
           mitochondrial-like [Cucumis sativus]
          Length = 127

 Score =  212 bits (539), Expect = 7e-53
 Identities = 101/125 (80%), Positives = 106/125 (84%)
 Frame = -2

Query: 643 MAGRLTNAASRILGGNGVVHRSVASSLRLRSGMGLPVGKHIVPDKPLSVNDELIWDNGTP 464
           MAG+LTN  S+ILGGNGVV RS+ASSLRLRSGMGLPVGKHIVPDKPL  NDEL+WDNGTP
Sbjct: 1   MAGKLTNLGSKILGGNGVVGRSIASSLRLRSGMGLPVGKHIVPDKPLPENDELVWDNGTP 60

Query: 463 FPEPCIDRIADTVGKYEALGWLCXXXXXXXXXXXXAVWNDKASKIPFTPKVYPYDNLRVE 284
           FPEPCIDRIADTVGKYEAL WLC            AVWNDKASKIPF PKVYPYDNLRVE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGFLAVWNDKASKIPFAPKVYPYDNLRVE 120

Query: 283 LGGEP 269
           LGG+P
Sbjct: 121 LGGDP 125


>ref|XP_002329914.1| predicted protein [Populus trichocarpa] gi|222871151|gb|EEF08282.1|
           predicted protein [Populus trichocarpa]
          Length = 125

 Score =  211 bits (537), Expect = 1e-52
 Identities = 101/125 (80%), Positives = 105/125 (84%)
 Frame = -2

Query: 643 MAGRLTNAASRILGGNGVVHRSVASSLRLRSGMGLPVGKHIVPDKPLSVNDELIWDNGTP 464
           MAGRL+N ASRI+GGNGVV RSVASSLRLRSGMGLPVGKHIVPDKP+SVNDEL WDNGT 
Sbjct: 1   MAGRLSNVASRIMGGNGVVSRSVASSLRLRSGMGLPVGKHIVPDKPISVNDELTWDNGTA 60

Query: 463 FPEPCIDRIADTVGKYEALGWLCXXXXXXXXXXXXAVWNDKASKIPFTPKVYPYDNLRVE 284
           FPEPCIDRIADTVGKYEAL WLC             VWNDKAS IPF PKVYPYDNL+VE
Sbjct: 61  FPEPCIDRIADTVGKYEALAWLCGGLGFFASLGLLVVWNDKASTIPFAPKVYPYDNLKVE 120

Query: 283 LGGEP 269
           LGGEP
Sbjct: 121 LGGEP 125


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