BLASTX nr result

ID: Glycyrrhiza24_contig00000557 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000557
         (2096 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525588.1| PREDICTED: elongation factor Tu, chloroplast...   748   0.0  
sp|P46280.1|EFTU2_SOYBN RecName: Full=Elongation factor Tu, chlo...   748   0.0  
ref|XP_003526993.1| PREDICTED: elongation factor Tu, chloroplast...   733   0.0  
sp|Q43467.1|EFTU1_SOYBN RecName: Full=Elongation factor Tu, chlo...   732   0.0  
ref|XP_002277301.1| PREDICTED: elongation factor Tu, chloroplast...   729   0.0  

>ref|XP_003525588.1| PREDICTED: elongation factor Tu, chloroplastic-like [Glycine max]
          Length = 479

 Score =  748 bits (1930), Expect = 0.0
 Identities = 384/453 (84%), Positives = 398/453 (87%)
 Frame = +1

Query: 256  NCLFLRAAHPIPTTHLSSSFINPSTIPLNPPQLTTARRPSFTVRAARGKFERKKPHVNIG 435
            N LFL+   P   THLSSSFI+P+TI       TT RR SFTVRAARGKFERKKPHVNIG
Sbjct: 28   NYLFLKTHKP-SATHLSSSFIHPTTILHLAAANTTTRRRSFTVRAARGKFERKKPHVNIG 86

Query: 436  TIGHVDHGKXXXXXXXXXXXXXXGNSAPKKYDEIDAAPEERARGITINTATVEYETENRH 615
            TIGHVDHGK              GNSAPKKYDEIDAAPEERARGITINTATVEYETENRH
Sbjct: 87   TIGHVDHGKTTLTAALTMALASLGNSAPKKYDEIDAAPEERARGITINTATVEYETENRH 146

Query: 616  YAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLN 795
            YAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPN+VVFLN
Sbjct: 147  YAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNIVVFLN 206

Query: 796  KXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWV 975
            K                     S YEFPGDDVPIISGSALL+LEALMANP+IKRGENQWV
Sbjct: 207  KQDQVDDEELLQLVELEVRELLSKYEFPGDDVPIISGSALLSLEALMANPAIKRGENQWV 266

Query: 976  DKIYDLMEAVDSYIPIPQRQTELPFLLAIEDVFSITGRGTVATGRVERGTVRVGETVEIV 1155
            DKIY+LMEAVD YIPIPQRQTELPFLLAIEDVF+ITGRGTVATGRVERGT+RVGETV+IV
Sbjct: 267  DKIYELMEAVDDYIPIPQRQTELPFLLAIEDVFTITGRGTVATGRVERGTIRVGETVDIV 326

Query: 1156 GVRETRNTTVTGVEMFQKILDEAMAGDNVGLLLRGIQKIDIQRGMVLAKPGTITPHTKFS 1335
            GV+ETRNTTVTGVEMFQKILDEA+AGDNVGLLLRGIQK DIQRGMVLAKPGTITPHTKFS
Sbjct: 327  GVKETRNTTVTGVEMFQKILDEALAGDNVGLLLRGIQKTDIQRGMVLAKPGTITPHTKFS 386

Query: 1336 AIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTSIMNDKDEESKMVMPGDRVKMVV 1515
            AIVYVLKKEEGGRHSPFF+GYRPQFYMRTTDVTGKVT IMNDKDEESKMVMPGDRVK+VV
Sbjct: 387  AIVYVLKKEEGGRHSPFFSGYRPQFYMRTTDVTGKVTEIMNDKDEESKMVMPGDRVKLVV 446

Query: 1516 ELIVPVACEQGMRFAIREGGKTVGAGVIQSIIE 1614
            ELIVPVACEQGMRFAIREGGKTVGAGVIQSIIE
Sbjct: 447  ELIVPVACEQGMRFAIREGGKTVGAGVIQSIIE 479


>sp|P46280.1|EFTU2_SOYBN RecName: Full=Elongation factor Tu, chloroplastic; Short=EF-Tu;
            Flags: Precursor gi|949873|emb|CAA61444.1| EF-Tu protein
            [Glycine max]
          Length = 479

 Score =  748 bits (1930), Expect = 0.0
 Identities = 384/453 (84%), Positives = 398/453 (87%)
 Frame = +1

Query: 256  NCLFLRAAHPIPTTHLSSSFINPSTIPLNPPQLTTARRPSFTVRAARGKFERKKPHVNIG 435
            N LFL+   P   THLSSSFI+P+TI       TT RR SFTVRAARGKFERKKPHVNIG
Sbjct: 28   NYLFLKTHKP-SATHLSSSFIHPTTILHLAAANTTTRRRSFTVRAARGKFERKKPHVNIG 86

Query: 436  TIGHVDHGKXXXXXXXXXXXXXXGNSAPKKYDEIDAAPEERARGITINTATVEYETENRH 615
            TIGHVDHGK              GNSAPKKYDEIDAAPEERARGITINTATVEYETENRH
Sbjct: 87   TIGHVDHGKTTLTAALTMALASLGNSAPKKYDEIDAAPEERARGITINTATVEYETENRH 146

Query: 616  YAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLN 795
            YAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPN+VVFLN
Sbjct: 147  YAHVDCPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNIVVFLN 206

Query: 796  KXXXXXXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWV 975
            K                     S YEFPGDDVPIISGSALL+LEALMANPSIKRGENQWV
Sbjct: 207  KQDQVDDEELLQLVELEVRELLSKYEFPGDDVPIISGSALLSLEALMANPSIKRGENQWV 266

Query: 976  DKIYDLMEAVDSYIPIPQRQTELPFLLAIEDVFSITGRGTVATGRVERGTVRVGETVEIV 1155
            DKIY+LMEAVD YIPIPQRQTELPFLLAIEDVF+ITGRGTVATGRVERGT+RVGETV+IV
Sbjct: 267  DKIYELMEAVDDYIPIPQRQTELPFLLAIEDVFTITGRGTVATGRVERGTIRVGETVDIV 326

Query: 1156 GVRETRNTTVTGVEMFQKILDEAMAGDNVGLLLRGIQKIDIQRGMVLAKPGTITPHTKFS 1335
            GV++TRNTTVTGVEMFQKILDEA+AGDNVGLLLRGIQK DIQRGMVLAKPGTITPHTKFS
Sbjct: 327  GVKDTRNTTVTGVEMFQKILDEALAGDNVGLLLRGIQKTDIQRGMVLAKPGTITPHTKFS 386

Query: 1336 AIVYVLKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTSIMNDKDEESKMVMPGDRVKMVV 1515
            AIVYVLKKEEGGRHSPFF+GYRPQFYMRTTDVTGKVT IMNDKDEESKMVMPGDRVK+VV
Sbjct: 387  AIVYVLKKEEGGRHSPFFSGYRPQFYMRTTDVTGKVTEIMNDKDEESKMVMPGDRVKLVV 446

Query: 1516 ELIVPVACEQGMRFAIREGGKTVGAGVIQSIIE 1614
            ELIVPVACEQGMRFAIREGGKTVGAGVIQSIIE
Sbjct: 447  ELIVPVACEQGMRFAIREGGKTVGAGVIQSIIE 479


>ref|XP_003526993.1| PREDICTED: elongation factor Tu, chloroplastic-like [Glycine max]
          Length = 479

 Score =  733 bits (1891), Expect = 0.0
 Identities = 368/440 (83%), Positives = 390/440 (88%)
 Frame = +1

Query: 295  THLSSSFINPSTIPLNPPQLTTARRPSFTVRAARGKFERKKPHVNIGTIGHVDHGKXXXX 474
            T LSSSF++P+T+    P  TT  R +FTVRAARGKFERKKPHVNIGTIGHVDHGK    
Sbjct: 40   TPLSSSFLHPTTVLRRTPSSTTTPRRTFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLT 99

Query: 475  XXXXXXXXXXGNSAPKKYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYV 654
                      GNSAPKKYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYV
Sbjct: 100  AALTMALAALGNSAPKKYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYV 159

Query: 655  KNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXX 834
            KNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNK            
Sbjct: 160  KNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQVDDEELLQL 219

Query: 835  XXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYDLMEAVDSY 1014
                     SSYEFPGDD PI+SGSALLALEALMANP+IKRG+N+WVDKI+ LM+ VD+Y
Sbjct: 220  VELEVRDLLSSYEFPGDDTPIVSGSALLALEALMANPAIKRGDNEWVDKIFQLMDEVDNY 279

Query: 1015 IPIPQRQTELPFLLAIEDVFSITGRGTVATGRVERGTVRVGETVEIVGVRETRNTTVTGV 1194
            IPIPQRQT+LPFLLA+EDVFSITGRGTVATGRVERGT++VGETV++VG+RETRNTTVTGV
Sbjct: 280  IPIPQRQTDLPFLLAVEDVFSITGRGTVATGRVERGTIKVGETVDLVGLRETRNTTVTGV 339

Query: 1195 EMFQKILDEAMAGDNVGLLLRGIQKIDIQRGMVLAKPGTITPHTKFSAIVYVLKKEEGGR 1374
            EMFQKILDEA+AGDNVGLLLRG+QK DIQRGMVLAKPGTITPHTKFSAIVYVLKKEEGGR
Sbjct: 340  EMFQKILDEALAGDNVGLLLRGVQKTDIQRGMVLAKPGTITPHTKFSAIVYVLKKEEGGR 399

Query: 1375 HSPFFAGYRPQFYMRTTDVTGKVTSIMNDKDEESKMVMPGDRVKMVVELIVPVACEQGMR 1554
            HSPFFAGYRPQFYMRTTDVTGKVTSIMNDKDEES MV+PGDRVKMVVELIVPVACEQGMR
Sbjct: 400  HSPFFAGYRPQFYMRTTDVTGKVTSIMNDKDEESTMVLPGDRVKMVVELIVPVACEQGMR 459

Query: 1555 FAIREGGKTVGAGVIQSIIE 1614
            FAIREGGKTVGAGVIQSIIE
Sbjct: 460  FAIREGGKTVGAGVIQSIIE 479


>sp|Q43467.1|EFTU1_SOYBN RecName: Full=Elongation factor Tu, chloroplastic; Short=EF-Tu;
            Flags: Precursor gi|18776|emb|CAA46864.1| EF-Tu [Glycine
            max] gi|448921|prf||1918220A elongation factor Tu
          Length = 479

 Score =  732 bits (1889), Expect = 0.0
 Identities = 367/440 (83%), Positives = 390/440 (88%)
 Frame = +1

Query: 295  THLSSSFINPSTIPLNPPQLTTARRPSFTVRAARGKFERKKPHVNIGTIGHVDHGKXXXX 474
            T LSSSF++P+T+    P  TT  R +FTVRAARGKFERKKPHVNIGTIGHVDHGK    
Sbjct: 40   TPLSSSFLHPTTVLRRTPSSTTTPRRTFTVRAARGKFERKKPHVNIGTIGHVDHGKTTLT 99

Query: 475  XXXXXXXXXXGNSAPKKYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYV 654
                      GNSAPKKYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYV
Sbjct: 100  AALTMALAALGNSAPKKYDEIDAAPEERARGITINTATVEYETENRHYAHVDCPGHADYV 159

Query: 655  KNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXXXXXXXXXX 834
            KNMITGAAQMDGAILVVSGADGPMPQTKEHI+LAKQVGVPNMVVFLNK            
Sbjct: 160  KNMITGAAQMDGAILVVSGADGPMPQTKEHIILAKQVGVPNMVVFLNKQDQVDDEELLQL 219

Query: 835  XXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYDLMEAVDSY 1014
                     SSYEFPGDD PI+SGSALLALEALMANP+IKRG+N+WVDKI+ LM+ VD+Y
Sbjct: 220  VEIEVRDLLSSYEFPGDDTPIVSGSALLALEALMANPAIKRGDNEWVDKIFQLMDEVDNY 279

Query: 1015 IPIPQRQTELPFLLAIEDVFSITGRGTVATGRVERGTVRVGETVEIVGVRETRNTTVTGV 1194
            IPIPQRQT+LPFLLA+EDVFSITGRGTVATGRVERGT++VGETV++VG+RETRNTTVTGV
Sbjct: 280  IPIPQRQTDLPFLLAVEDVFSITGRGTVATGRVERGTIKVGETVDLVGLRETRNTTVTGV 339

Query: 1195 EMFQKILDEAMAGDNVGLLLRGIQKIDIQRGMVLAKPGTITPHTKFSAIVYVLKKEEGGR 1374
            EMFQKILDEA+AGDNVGLLLRG+QK DIQRGMVLAKPGTITPHTKFSAIVYVLKKEEGGR
Sbjct: 340  EMFQKILDEALAGDNVGLLLRGVQKTDIQRGMVLAKPGTITPHTKFSAIVYVLKKEEGGR 399

Query: 1375 HSPFFAGYRPQFYMRTTDVTGKVTSIMNDKDEESKMVMPGDRVKMVVELIVPVACEQGMR 1554
            HSPFFAGYRPQFYMRTTDVTGKVTSIMNDKDEES MV+PGDRVKMVVELIVPVACEQGMR
Sbjct: 400  HSPFFAGYRPQFYMRTTDVTGKVTSIMNDKDEESTMVLPGDRVKMVVELIVPVACEQGMR 459

Query: 1555 FAIREGGKTVGAGVIQSIIE 1614
            FAIREGGKTVGAGVIQSIIE
Sbjct: 460  FAIREGGKTVGAGVIQSIIE 479


>ref|XP_002277301.1| PREDICTED: elongation factor Tu, chloroplastic-like [Vitis vinifera]
          Length = 486

 Score =  729 bits (1883), Expect = 0.0
 Identities = 375/448 (83%), Positives = 397/448 (88%), Gaps = 3/448 (0%)
 Frame = +1

Query: 280  HPIPTTHLSSSFIN-PSTIPLNPPQLT--TARRPSFTVRAARGKFERKKPHVNIGTIGHV 450
            HP   ++LSSSF++ PST  L  P  T  T +R SFTVRAARGKFER KPH+NIGTIGHV
Sbjct: 42   HP---SNLSSSFLSKPSTTFLLTPTTTATTTQRRSFTVRAARGKFERNKPHLNIGTIGHV 98

Query: 451  DHGKXXXXXXXXXXXXXXGNSAPKKYDEIDAAPEERARGITINTATVEYETENRHYAHVD 630
            DHGK              GNSAPKKYDEIDAAPEERARGITINTATVEYETENRHYAHVD
Sbjct: 99   DHGKTTLTAALTMALAAMGNSAPKKYDEIDAAPEERARGITINTATVEYETENRHYAHVD 158

Query: 631  CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKXXXX 810
            CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNK    
Sbjct: 159  CPGHADYVKNMITGAAQMDGAILVVSGADGPMPQTKEHILLAKQVGVPNMVVFLNKQDQV 218

Query: 811  XXXXXXXXXXXXXXXXXSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYD 990
                             SSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIY+
Sbjct: 219  DDEELLQLVELEVRELLSSYEFPGDDVPIISGSALLALEALMANPSIKRGENQWVDKIYE 278

Query: 991  LMEAVDSYIPIPQRQTELPFLLAIEDVFSITGRGTVATGRVERGTVRVGETVEIVGVRET 1170
            LM++VDSYIPIPQRQT+LPFLLAIEDVFSITGRGTVATGRVERGT++VGETV+IVG+++T
Sbjct: 279  LMDSVDSYIPIPQRQTDLPFLLAIEDVFSITGRGTVATGRVERGTIKVGETVDIVGLKDT 338

Query: 1171 RNTTVTGVEMFQKILDEAMAGDNVGLLLRGIQKIDIQRGMVLAKPGTITPHTKFSAIVYV 1350
            R+TTVTGVEMFQKILDEA+AGDNVG+LLRG+QK DIQRGMVLAKPGTITPHTKF+AIVYV
Sbjct: 339  RSTTVTGVEMFQKILDEALAGDNVGILLRGVQKADIQRGMVLAKPGTITPHTKFAAIVYV 398

Query: 1351 LKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTSIMNDKDEESKMVMPGDRVKMVVELIVP 1530
            LKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTSIMNDKDEESKMVMPGDRVKMVVELI+P
Sbjct: 399  LKKEEGGRHSPFFAGYRPQFYMRTTDVTGKVTSIMNDKDEESKMVMPGDRVKMVVELIMP 458

Query: 1531 VACEQGMRFAIREGGKTVGAGVIQSIIE 1614
            VACEQGMRFAIREGGKTVGAGVIQSIIE
Sbjct: 459  VACEQGMRFAIREGGKTVGAGVIQSIIE 486


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