BLASTX nr result
ID: Glycyrrhiza24_contig00000544
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00000544
(807 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ACU14088.1| unknown [Glycine max] 405 e-111
gb|AFK33315.1| unknown [Lotus japonicus] 404 e-110
ref|XP_003543368.1| PREDICTED: cytochrome b6-f complex iron-sulf... 401 e-110
ref|NP_001237648.1| Rieske iron-sulphur protein precursor [Glyci... 395 e-108
ref|XP_002325684.1| predicted protein [Populus trichocarpa] gi|1... 383 e-104
>gb|ACU14088.1| unknown [Glycine max]
Length = 227
Score = 405 bits (1041), Expect = e-111
Identities = 189/220 (85%), Positives = 196/220 (89%)
Frame = +1
Query: 127 PATPSQLCSGKSGIFCPSQALMVKPARRQMMGKGKGMRIVCQATSIPADRVPDMGKRQLM 306
P TPSQLCSGKSGIF PSQAL+VKP +RQMMGK KGMRI CQATSIPADRVPDMGKRQLM
Sbjct: 8 PTTPSQLCSGKSGIFSPSQALLVKPVKRQMMGKSKGMRIACQATSIPADRVPDMGKRQLM 67
Query: 307 NLLLLGAISLPTAGMLVPYATFFAPPXXXXXXXXXVAKDAIGNDVIAEQWLKTHGPGDRT 486
NLLLLGAISLP+AGML+PY FF PP VAKDA+GNDVIAE WLK HGPGDRT
Sbjct: 68 NLLLLGAISLPSAGMLIPYTYFFVPPGSGSSAGGTVAKDAVGNDVIAENWLKAHGPGDRT 127
Query: 487 LTQGLKGDPTYLVVEKDRQLATYGINAVCTHLGCVVPWNAAENKFICPCHGSQYNDQGRV 666
L QGLKGDPTYLVVEKDR LATY INAVCTHLGCVVPWN AENKFICPCHGSQYNDQGRV
Sbjct: 128 LAQGLKGDPTYLVVEKDRTLATYAINAVCTHLGCVVPWNQAENKFICPCHGSQYNDQGRV 187
Query: 667 VRGPAPLSLALAHCDVDDGKVVFVPWVETDFRTGDAPWWS 786
RGPAPLSLALAHCD+DDGKVVFVPWVETDFRTGDAPWW+
Sbjct: 188 ARGPAPLSLALAHCDIDDGKVVFVPWVETDFRTGDAPWWA 227
>gb|AFK33315.1| unknown [Lotus japonicus]
Length = 227
Score = 404 bits (1037), Expect = e-110
Identities = 190/220 (86%), Positives = 200/220 (90%)
Frame = +1
Query: 127 PATPSQLCSGKSGIFCPSQALMVKPARRQMMGKGKGMRIVCQATSIPADRVPDMGKRQLM 306
P TPSQLCSGKSGIFCPSQAL+VKPAR QM+GK KG+RI C ATSIPADRVPDM KR+L+
Sbjct: 8 PVTPSQLCSGKSGIFCPSQALLVKPARNQMVGKAKGIRIACMATSIPADRVPDMEKRKLL 67
Query: 307 NLLLLGAISLPTAGMLVPYATFFAPPXXXXXXXXXVAKDAIGNDVIAEQWLKTHGPGDRT 486
NLLLLGAISLP+AGMLVPYATFFAPP +AKDAIGNDV+AEQWLK HGPGDRT
Sbjct: 68 NLLLLGAISLPSAGMLVPYATFFAPPGSGSATGGTIAKDAIGNDVVAEQWLKAHGPGDRT 127
Query: 487 LTQGLKGDPTYLVVEKDRQLATYGINAVCTHLGCVVPWNAAENKFICPCHGSQYNDQGRV 666
LTQGLKGDPTYLVVEKDR LATYGINAVCTHLGCVVP+N AE KFICPCHGSQYNDQGRV
Sbjct: 128 LTQGLKGDPTYLVVEKDRTLATYGINAVCTHLGCVVPFNTAEKKFICPCHGSQYNDQGRV 187
Query: 667 VRGPAPLSLALAHCDVDDGKVVFVPWVETDFRTGDAPWWS 786
VRGPAPLSLALAHCDV DGKVVFVPWVETDFRTGDAPWW+
Sbjct: 188 VRGPAPLSLALAHCDVVDGKVVFVPWVETDFRTGDAPWWA 227
>ref|XP_003543368.1| PREDICTED: cytochrome b6-f complex iron-sulfur subunit,
chloroplastic-like [Glycine max]
Length = 227
Score = 401 bits (1031), Expect = e-110
Identities = 188/220 (85%), Positives = 196/220 (89%)
Frame = +1
Query: 127 PATPSQLCSGKSGIFCPSQALMVKPARRQMMGKGKGMRIVCQATSIPADRVPDMGKRQLM 306
P TPSQLCSGKSGIF SQAL+VKP +RQMMGK KG+RI CQATSI ADRVPDMGKRQLM
Sbjct: 8 PTTPSQLCSGKSGIFSSSQALLVKPVKRQMMGKSKGLRIACQATSISADRVPDMGKRQLM 67
Query: 307 NLLLLGAISLPTAGMLVPYATFFAPPXXXXXXXXXVAKDAIGNDVIAEQWLKTHGPGDRT 486
NLLLLGAISLPTAGML+PY FF PP VAKDA+GNDVIAE WLK HGPGDRT
Sbjct: 68 NLLLLGAISLPTAGMLIPYTYFFVPPGSGSSAGGTVAKDAVGNDVIAENWLKAHGPGDRT 127
Query: 487 LTQGLKGDPTYLVVEKDRQLATYGINAVCTHLGCVVPWNAAENKFICPCHGSQYNDQGRV 666
LTQGLKGDPTYLVVEKDR LAT+ INAVCTHLGCVVPWN AENKFICPCHGSQYNDQGRV
Sbjct: 128 LTQGLKGDPTYLVVEKDRTLATFAINAVCTHLGCVVPWNQAENKFICPCHGSQYNDQGRV 187
Query: 667 VRGPAPLSLALAHCDVDDGKVVFVPWVETDFRTGDAPWWS 786
VRGPAPLSLALAHCD+DDGKVVFVPWVETDFRTGDAPWW+
Sbjct: 188 VRGPAPLSLALAHCDIDDGKVVFVPWVETDFRTGDAPWWA 227
>ref|NP_001237648.1| Rieske iron-sulphur protein precursor [Glycine max]
gi|158935079|emb|CAM57107.1| Rieske iron-sulphur protein
precursor [Glycine max]
Length = 227
Score = 395 bits (1016), Expect = e-108
Identities = 185/220 (84%), Positives = 194/220 (88%)
Frame = +1
Query: 127 PATPSQLCSGKSGIFCPSQALMVKPARRQMMGKGKGMRIVCQATSIPADRVPDMGKRQLM 306
P TPSQLCSGKSGIF SQAL+VKP +RQMMGK KG+RI CQATSI ADRVPDMGKRQLM
Sbjct: 8 PTTPSQLCSGKSGIFSSSQALLVKPVKRQMMGKSKGLRIACQATSISADRVPDMGKRQLM 67
Query: 307 NLLLLGAISLPTAGMLVPYATFFAPPXXXXXXXXXVAKDAIGNDVIAEQWLKTHGPGDRT 486
NLLLLGAISLPTAGML+PY FF PP VAKDA+GNDVIAE WLK HGPGDRT
Sbjct: 68 NLLLLGAISLPTAGMLIPYTYFFVPPGSGSSAGGTVAKDAVGNDVIAENWLKAHGPGDRT 127
Query: 487 LTQGLKGDPTYLVVEKDRQLATYGINAVCTHLGCVVPWNAAENKFICPCHGSQYNDQGRV 666
LTQGLKG PTYL VEKDR LAT+ INAVCTHLGCVVPWN AENKFICPCHGS+YNDQGRV
Sbjct: 128 LTQGLKGGPTYLAVEKDRTLATFAINAVCTHLGCVVPWNQAENKFICPCHGSRYNDQGRV 187
Query: 667 VRGPAPLSLALAHCDVDDGKVVFVPWVETDFRTGDAPWWS 786
VRGPAPLSLALAHCD+DDGKVVFVPWVETDFRTGDAPWW+
Sbjct: 188 VRGPAPLSLALAHCDIDDGKVVFVPWVETDFRTGDAPWWA 227
>ref|XP_002325684.1| predicted protein [Populus trichocarpa] gi|118486166|gb|ABK94926.1|
unknown [Populus trichocarpa]
gi|118487342|gb|ABK95499.1| unknown [Populus
trichocarpa] gi|222862559|gb|EEF00066.1| predicted
protein [Populus trichocarpa]
Length = 228
Score = 383 bits (983), Expect = e-104
Identities = 181/221 (81%), Positives = 193/221 (87%), Gaps = 1/221 (0%)
Frame = +1
Query: 127 PATPSQLCSGKSGIFCPSQALMVKPARRQMMGKGKGMRIVCQATSIPAD-RVPDMGKRQL 303
PATPSQLCS KSG+F P+ A+ VKP R M+ K +GMRI CQATS+PAD RVPDMGKR+L
Sbjct: 8 PATPSQLCSSKSGMFSPTHAVFVKPTRTNMVLKERGMRISCQATSVPADDRVPDMGKREL 67
Query: 304 MNLLLLGAISLPTAGMLVPYATFFAPPXXXXXXXXXVAKDAIGNDVIAEQWLKTHGPGDR 483
MNLLLLGA+SLPTAGMLVPY FF P VAKDA+GND++AEQWL THGPGDR
Sbjct: 68 MNLLLLGALSLPTAGMLVPYTYFFVPTGLGGGGGGTVAKDALGNDIVAEQWLNTHGPGDR 127
Query: 484 TLTQGLKGDPTYLVVEKDRQLATYGINAVCTHLGCVVPWNAAENKFICPCHGSQYNDQGR 663
TL+QGLKGDPTYLVVEKDR LATYGINAVCTHLGCVVPWN AE KFICPCHGSQYNDQGR
Sbjct: 128 TLSQGLKGDPTYLVVEKDRVLATYGINAVCTHLGCVVPWNQAEKKFICPCHGSQYNDQGR 187
Query: 664 VVRGPAPLSLALAHCDVDDGKVVFVPWVETDFRTGDAPWWS 786
VVRGPAPLSLALAHCDVDDGKVVFVPWVETDFRTGDAPWWS
Sbjct: 188 VVRGPAPLSLALAHCDVDDGKVVFVPWVETDFRTGDAPWWS 228