BLASTX nr result

ID: Glycyrrhiza24_contig00000540 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000540
         (852 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK43302.1| unknown [Lotus japonicus]                              273   3e-71
ref|XP_003592049.1| 40S ribosomal protein S18 [Medicago truncatu...   272   6e-71
gb|AFK36754.1| unknown [Lotus japonicus]                              272   8e-71
emb|CBI18243.3| unnamed protein product [Vitis vinifera]              272   8e-71
ref|XP_003518511.1| PREDICTED: 40S ribosomal protein S18-like [G...   271   1e-70

>gb|AFK43302.1| unknown [Lotus japonicus]
          Length = 152

 Score =  273 bits (699), Expect = 3e-71
 Identities = 136/152 (89%), Positives = 139/152 (91%)
 Frame = -2

Query: 773 MSLVANEEFQHILRVLNTNVDGKQKIMFAMTSIKGIGRRFANICCKKADVDMNKRAGELS 594
           MSLVANEEFQHILRVLNTNVDGKQKIMFA+TSIKGIGRRFANICCKKADVDMNKRAGELS
Sbjct: 1   MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANICCKKADVDMNKRAGELS 60

Query: 593 AAELDNLMTVVANPRQFKIPDWFLNRKKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 414
           AAELDN+MTVVANP+QFKIPDWFLNRKKDYKDGKY QVVSNALDMKLRDDLERLKKIRNH
Sbjct: 61  AAELDNVMTVVANPKQFKIPDWFLNRKKDYKDGKYHQVVSNALDMKLRDDLERLKKIRNH 120

Query: 413 RGLRHYWGLRVRGQHXXXXXXXXXXXXVSKKR 318
           RGLRHYWGLRVRGQH            VSKKR
Sbjct: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 152


>ref|XP_003592049.1| 40S ribosomal protein S18 [Medicago truncatula]
           gi|357443553|ref|XP_003592054.1| 40S ribosomal protein
           S18 [Medicago truncatula] gi|217075242|gb|ACJ85981.1|
           unknown [Medicago truncatula]
           gi|355481097|gb|AES62300.1| 40S ribosomal protein S18
           [Medicago truncatula] gi|355481102|gb|AES62305.1| 40S
           ribosomal protein S18 [Medicago truncatula]
           gi|388517109|gb|AFK46616.1| unknown [Medicago
           truncatula]
          Length = 152

 Score =  272 bits (696), Expect = 6e-71
 Identities = 135/152 (88%), Positives = 138/152 (90%)
 Frame = -2

Query: 773 MSLVANEEFQHILRVLNTNVDGKQKIMFAMTSIKGIGRRFANICCKKADVDMNKRAGELS 594
           MSLVANEEFQHILRVLNTNVDGKQKI FAMTSIKGIGRRFANICCKKADVDMNKRAGELS
Sbjct: 1   MSLVANEEFQHILRVLNTNVDGKQKIQFAMTSIKGIGRRFANICCKKADVDMNKRAGELS 60

Query: 593 AAELDNLMTVVANPRQFKIPDWFLNRKKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 414
           AAELDN+MTVVANPRQFK+PDWFLNRKKDYKDGK+SQVVSN LDMKLRDDLERLKKIRNH
Sbjct: 61  AAELDNIMTVVANPRQFKVPDWFLNRKKDYKDGKFSQVVSNQLDMKLRDDLERLKKIRNH 120

Query: 413 RGLRHYWGLRVRGQHXXXXXXXXXXXXVSKKR 318
           RGLRHYWGLRVRGQH            VSKKR
Sbjct: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 152


>gb|AFK36754.1| unknown [Lotus japonicus]
          Length = 152

 Score =  272 bits (695), Expect = 8e-71
 Identities = 135/152 (88%), Positives = 138/152 (90%)
 Frame = -2

Query: 773 MSLVANEEFQHILRVLNTNVDGKQKIMFAMTSIKGIGRRFANICCKKADVDMNKRAGELS 594
           MSLVANEEFQHILRVLNTNVDGKQKIMFA+TSIKGIGRRFANICCKK DVDMNKRAGELS
Sbjct: 1   MSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANICCKKTDVDMNKRAGELS 60

Query: 593 AAELDNLMTVVANPRQFKIPDWFLNRKKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 414
           AAELDN+MTVVANP+QFKIPDWFLNRKKDYKDGKY QVVSNALDMKLRDDLERLKKIRNH
Sbjct: 61  AAELDNVMTVVANPKQFKIPDWFLNRKKDYKDGKYHQVVSNALDMKLRDDLERLKKIRNH 120

Query: 413 RGLRHYWGLRVRGQHXXXXXXXXXXXXVSKKR 318
           RGLRHYWGLRVRGQH            VSKKR
Sbjct: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 152


>emb|CBI18243.3| unnamed protein product [Vitis vinifera]
          Length = 194

 Score =  272 bits (695), Expect = 8e-71
 Identities = 137/165 (83%), Positives = 144/165 (87%)
 Frame = -2

Query: 812 RQQSLSNESSAAKMSLVANEEFQHILRVLNTNVDGKQKIMFAMTSIKGIGRRFANICCKK 633
           R++S      A+ MSLVANEEFQHILRVLNTNVDGKQKIMFA+TSIKGIGRRFANI CKK
Sbjct: 30  RRESKVTSIFASTMSLVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKK 89

Query: 632 ADVDMNKRAGELSAAELDNLMTVVANPRQFKIPDWFLNRKKDYKDGKYSQVVSNALDMKL 453
           ADVDMNKRAGELSAAEL+NLM +VANPRQFKIPDWFLNRKKDYKDG+YSQVVSNALDMKL
Sbjct: 90  ADVDMNKRAGELSAAELENLMVIVANPRQFKIPDWFLNRKKDYKDGRYSQVVSNALDMKL 149

Query: 452 RDDLERLKKIRNHRGLRHYWGLRVRGQHXXXXXXXXXXXXVSKKR 318
           RDDLERLKKIRNHRGLRHYWGLRVRGQH            VSKKR
Sbjct: 150 RDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 194


>ref|XP_003518511.1| PREDICTED: 40S ribosomal protein S18-like [Glycine max]
          Length = 152

 Score =  271 bits (694), Expect = 1e-70
 Identities = 135/152 (88%), Positives = 139/152 (91%)
 Frame = -2

Query: 773 MSLVANEEFQHILRVLNTNVDGKQKIMFAMTSIKGIGRRFANICCKKADVDMNKRAGELS 594
           MSLVANE+FQHILRVLNTNVDGKQKIMFA+TSIKGIGRRFANICCKKADVDMNKRAGELS
Sbjct: 1   MSLVANEDFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANICCKKADVDMNKRAGELS 60

Query: 593 AAELDNLMTVVANPRQFKIPDWFLNRKKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 414
           A ELD++MTVVANPRQFKIPDWFLNRKKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH
Sbjct: 61  AIELDSVMTVVANPRQFKIPDWFLNRKKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNH 120

Query: 413 RGLRHYWGLRVRGQHXXXXXXXXXXXXVSKKR 318
           RGLRHYWGLRVRGQH            VSKKR
Sbjct: 121 RGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 152


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