BLASTX nr result

ID: Glycyrrhiza24_contig00000524 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000524
         (936 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602547.1| Photosystem I reaction center subunit N [Med...   243   5e-62
ref|XP_002306249.1| predicted protein [Populus trichocarpa] gi|1...   235   1e-59
ref|XP_002309915.1| predicted protein [Populus trichocarpa] gi|2...   231   2e-58
gb|ABK96256.1| unknown [Populus trichocarpa x Populus deltoides]...   229   7e-58
ref|XP_003631913.1| PREDICTED: photosystem I reaction center sub...   228   2e-57

>ref|XP_003602547.1| Photosystem I reaction center subunit N [Medicago truncatula]
           gi|355491595|gb|AES72798.1| Photosystem I reaction
           center subunit N [Medicago truncatula]
           gi|388492560|gb|AFK34346.1| unknown [Medicago
           truncatula]
          Length = 172

 Score =  243 bits (620), Expect = 5e-62
 Identities = 129/176 (73%), Positives = 139/176 (78%), Gaps = 2/176 (1%)
 Frame = +1

Query: 148 MASMNSGVLACSYAISGTGCSELNAKLISVTSPAA--FSGSKLPMIKAQKAIVPEAKESK 321
           MA+MNS VLACSYAISG   SELNAKLISV S A+   SG KLP+IKAQ+  +PEAKES+
Sbjct: 1   MAAMNSSVLACSYAISG---SELNAKLISVPSAASPGVSGIKLPLIKAQQVRIPEAKESR 57

Query: 322 ASEGRRTXXXXXXXXXXXXXXXXXXXXXXXXGVIEEYLERSKANKELNDKKRLATSGANF 501
           AS+GRR                         GVIEEYLE+SKANKELNDKKRLATSGANF
Sbjct: 58  ASDGRRNALALLAATLFTTAVSASNSSANA-GVIEEYLEKSKANKELNDKKRLATSGANF 116

Query: 502 ARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISEDLEIECEGKDKYKCGSNVFWKW 669
           ARAYTVQFGTCKFPENFTGCQDLAKQKKVPFI+EDLE+ECEGKDKYKCGSNVFWKW
Sbjct: 117 ARAYTVQFGTCKFPENFTGCQDLAKQKKVPFITEDLELECEGKDKYKCGSNVFWKW 172


>ref|XP_002306249.1| predicted protein [Populus trichocarpa] gi|118486634|gb|ABK95154.1|
           unknown [Populus trichocarpa]
           gi|222855698|gb|EEE93245.1| predicted protein [Populus
           trichocarpa]
          Length = 172

 Score =  235 bits (599), Expect = 1e-59
 Identities = 123/176 (69%), Positives = 138/176 (78%), Gaps = 2/176 (1%)
 Frame = +1

Query: 148 MASMNSGVLACSYAISGTGCSELNAKLISVTSPAA--FSGSKLPMIKAQKAIVPEAKESK 321
           MA+MNS VLAC+YAISGTG SELNAK++S+ + A+   SG KLP+I+AQ+A   ++KE K
Sbjct: 1   MAAMNSSVLACNYAISGTGSSELNAKIVSMPAVASPVVSGPKLPIIRAQQARA-DSKEMK 59

Query: 322 ASEGRRTXXXXXXXXXXXXXXXXXXXXXXXXGVIEEYLERSKANKELNDKKRLATSGANF 501
           ASEGRR                         GVIE+YLE+SKANKELNDKKRLATSGANF
Sbjct: 60  ASEGRRAALVYLAATLFTSAAAAASANA---GVIEDYLEKSKANKELNDKKRLATSGANF 116

Query: 502 ARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISEDLEIECEGKDKYKCGSNVFWKW 669
           ARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISEDL +ECEGKDKYKCGSNVFWKW
Sbjct: 117 ARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISEDLALECEGKDKYKCGSNVFWKW 172


>ref|XP_002309915.1| predicted protein [Populus trichocarpa] gi|222852818|gb|EEE90365.1|
           predicted protein [Populus trichocarpa]
          Length = 172

 Score =  231 bits (589), Expect = 2e-58
 Identities = 120/176 (68%), Positives = 137/176 (77%), Gaps = 2/176 (1%)
 Frame = +1

Query: 148 MASMNSGVLACSYAISGTGCSELNAKLISVTSPAAF--SGSKLPMIKAQKAIVPEAKESK 321
           MA+MNS VLAC+YAISGTG SELNAK++S+ + A+   SG KLP+I+AQ+    +++E K
Sbjct: 1   MAAMNSSVLACNYAISGTGSSELNAKIVSMPAVASLVVSGPKLPVIRAQQTRA-DSREMK 59

Query: 322 ASEGRRTXXXXXXXXXXXXXXXXXXXXXXXXGVIEEYLERSKANKELNDKKRLATSGANF 501
           ASEGRR                         GVIEEYLE+SKANKELNDKKRLATSGANF
Sbjct: 60  ASEGRRAAMVYLAATLFTSAAAASSANA---GVIEEYLEKSKANKELNDKKRLATSGANF 116

Query: 502 ARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISEDLEIECEGKDKYKCGSNVFWKW 669
           ARA+TVQFGTCKFPENFTGCQDLAKQKKVPFIS+DL +ECEGKDKYKCGSNVFWKW
Sbjct: 117 ARAFTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKYKCGSNVFWKW 172


>gb|ABK96256.1| unknown [Populus trichocarpa x Populus deltoides]
           gi|118489284|gb|ABK96447.1| unknown [Populus trichocarpa
           x Populus deltoides]
          Length = 172

 Score =  229 bits (584), Expect = 7e-58
 Identities = 119/176 (67%), Positives = 136/176 (77%), Gaps = 2/176 (1%)
 Frame = +1

Query: 148 MASMNSGVLACSYAISGTGCSELNAKLISVTSPAAF--SGSKLPMIKAQKAIVPEAKESK 321
           MA+MNS VLAC+YAISGTG SELNAK++S+ + A+    G KLP+I+AQ+    +++E K
Sbjct: 1   MAAMNSSVLACNYAISGTGSSELNAKIVSMPAVASLVVCGPKLPVIRAQQTRA-DSREMK 59

Query: 322 ASEGRRTXXXXXXXXXXXXXXXXXXXXXXXXGVIEEYLERSKANKELNDKKRLATSGANF 501
           ASEGRR                         GVIEEYLE+SKANKELNDKKRLATSGANF
Sbjct: 60  ASEGRRAAMVYLAATLFTSAAAASSANA---GVIEEYLEKSKANKELNDKKRLATSGANF 116

Query: 502 ARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISEDLEIECEGKDKYKCGSNVFWKW 669
           ARA+TVQFGTCKFPENFTGCQDLAKQKKVPFIS+DL +ECEGKDKYKCGSNVFWKW
Sbjct: 117 ARAFTVQFGTCKFPENFTGCQDLAKQKKVPFISDDLALECEGKDKYKCGSNVFWKW 172


>ref|XP_003631913.1| PREDICTED: photosystem I reaction center subunit N, chloroplastic
           [Vitis vinifera]
          Length = 173

 Score =  228 bits (581), Expect = 2e-57
 Identities = 117/176 (66%), Positives = 135/176 (76%), Gaps = 2/176 (1%)
 Frame = +1

Query: 148 MASMNSGVLACSYAISGTGCSELNAKLISVTSPA--AFSGSKLPMIKAQKAIVPEAKESK 321
           MAS+NS VLAC+YAISG G  ELN+KL+S+ S A  A +G KLP I+AQ+A V ++K+  
Sbjct: 1   MASVNSSVLACNYAISGAGAPELNSKLVSMPSAASPAVAGLKLPAIRAQQARVSDSKKWG 60

Query: 322 ASEGRRTXXXXXXXXXXXXXXXXXXXXXXXXGVIEEYLERSKANKELNDKKRLATSGANF 501
           A EGRR                         GVI++YLE+SKANKELNDKKRLATSGANF
Sbjct: 61  AGEGRRAALVYLAATLFTTAAASSSANA---GVIDDYLEKSKANKELNDKKRLATSGANF 117

Query: 502 ARAYTVQFGTCKFPENFTGCQDLAKQKKVPFISEDLEIECEGKDKYKCGSNVFWKW 669
           ARAYTVQFGTCKFPENFTGCQDLAK+KKVPF+SEDLE+ECEG+DKYKCGSNVFWKW
Sbjct: 118 ARAYTVQFGTCKFPENFTGCQDLAKKKKVPFLSEDLELECEGRDKYKCGSNVFWKW 173


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