BLASTX nr result

ID: Glycyrrhiza24_contig00000514 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000514
         (1136 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554528.1| PREDICTED: RING-H2 finger protein ATL5-like ...   206   9e-51
emb|CBI36881.3| unnamed protein product [Vitis vinifera]              118   3e-24
ref|XP_003632375.1| PREDICTED: RING-H2 finger protein ATL2-like ...   117   5e-24
ref|XP_002878471.1| hypothetical protein ARALYDRAFT_907844 [Arab...   115   3e-23
ref|XP_002523110.1| RING-H2 finger protein ATL3L, putative [Rici...   112   1e-22

>ref|XP_003554528.1| PREDICTED: RING-H2 finger protein ATL5-like [Glycine max]
          Length = 212

 Score =  206 bits (524), Expect = 9e-51
 Identities = 118/203 (58%), Positives = 131/203 (64%), Gaps = 8/203 (3%)
 Frame = -2

Query: 1039 MAMDSDLEVKYARNGKVMVCSAXXXXXXXXXXXXFRTYXXXXXXXXXXXRDPLPTTTT-- 866
            M  + D+E KYA NGKVMV +A            F TY              LPT ++  
Sbjct: 1    MTTEPDVESKYAHNGKVMVGTAILLFILIIIIIFFHTYVRFCRRRRRFSHS-LPTNSSAA 59

Query: 865  --YKEERLDPSILKSLPTFTYSSTSATHRRPLHDCAVCLSEFADGDECRTLPNCNHSFHS 692
                +  LDPSI+KSLPTFT+S+  ATHR  L DCAVCLSEF+DGDE R LPNC HSFH+
Sbjct: 60   ASLDDPCLDPSIIKSLPTFTFSA--ATHRS-LQDCAVCLSEFSDGDEGRVLPNCKHSFHA 116

Query: 691  RCIDPWFASHSNCPLCRTPVQPETVSSHTEQCSVSVSEAGEGC--SSFPEPIMCPRKPLG 518
             CID W  SHS CPLCRTPV+P T SS TE  SVSVSEAGEGC  SS P PI CPRKPLG
Sbjct: 117  HCIDTWIGSHSTCPLCRTPVKPVTGSSDTEPGSVSVSEAGEGCSSSSLPPPIGCPRKPLG 176

Query: 517  --IIVELPGAERGSDPVPGDHGF 455
              IIVE+P  ERGSD V GD GF
Sbjct: 177  INIIVEIPEVERGSDSVTGDQGF 199


>emb|CBI36881.3| unnamed protein product [Vitis vinifera]
          Length = 241

 Score =  118 bits (295), Expect = 3e-24
 Identities = 68/133 (51%), Positives = 80/133 (60%), Gaps = 8/133 (6%)
 Frame = -2

Query: 859 EERLDPSILKSLPTFTYSSTSATHRRPLHDCAVCLSEFADGDECRTLPNCNHSFHSRCID 680
           ++ LD SILKSLPTF YS   ATH  P+ +CAVCLSEF D ++ R LP CNH FH+ CID
Sbjct: 82  DQGLDVSILKSLPTFVYSK--ATHG-PILECAVCLSEFEDDEKGRVLPKCNHCFHNDCID 138

Query: 679 PWFASHSNCPLCRTPVQPETVSSHTEQCSVSVSEAGEGCSSFPEP-----IMCPRKPL-- 521
            WF SHSNCPLCR      T+S  + +C     E   G SS   P     + CPRKPL  
Sbjct: 139 MWFHSHSNCPLCRA----LTISGASPRCPRDDDENETGPSSSLTPGTLTLLECPRKPLEL 194

Query: 520 -GIIVELPGAERG 485
            GI VE+P    G
Sbjct: 195 VGITVEMPAMRAG 207


>ref|XP_003632375.1| PREDICTED: RING-H2 finger protein ATL2-like [Vitis vinifera]
          Length = 263

 Score =  117 bits (293), Expect = 5e-24
 Identities = 70/151 (46%), Positives = 82/151 (54%), Gaps = 26/151 (17%)
 Frame = -2

Query: 859 EERLDPSILKSLPTFTYSSTSATHRRPLHDCAVCLSEFADGDECRTLPNCNHSFHSRCID 680
           ++ LD SILKSLPTF YS   ATH  P+ +CAVCLSEF D ++ R LP CNH FH+ CID
Sbjct: 82  DQGLDVSILKSLPTFVYSK--ATHG-PILECAVCLSEFEDDEKGRVLPKCNHCFHNDCID 138

Query: 679 PWFASHSNCPLCRT------------------PVQPETVSSHTEQCSVSVSEAGEGCSSF 554
            WF SHSNCPLCR                   P   ET+S  + +C     E   G SS 
Sbjct: 139 MWFHSHSNCPLCRALVPLHLPSPPETVVPVLEPAGTETISGASPRCPRDDDENETGPSSS 198

Query: 553 PEP-----IMCPRKPL---GIIVELPGAERG 485
             P     + CPRKPL   GI VE+P    G
Sbjct: 199 LTPGTLTLLECPRKPLELVGITVEMPAMRAG 229


>ref|XP_002878471.1| hypothetical protein ARALYDRAFT_907844 [Arabidopsis lyrata subsp.
           lyrata] gi|297324309|gb|EFH54730.1| hypothetical protein
           ARALYDRAFT_907844 [Arabidopsis lyrata subsp. lyrata]
          Length = 257

 Score =  115 bits (287), Expect = 3e-23
 Identities = 69/170 (40%), Positives = 89/170 (52%), Gaps = 29/170 (17%)
 Frame = -2

Query: 880 PTTTTYKEERLDPSILKSLPTFTYSSTSATHRRPLHDCAVCLSEFADGDECRTLPNCNHS 701
           PT ++     LDP++L+ +P F YS+   TH  PL +C+VCLSEF + DE R LP C H 
Sbjct: 78  PTQSSSSLSPLDPTVLEKIPIFVYSAK--THESPLEECSVCLSEFEEDDEGRVLPKCGHV 135

Query: 700 FHSRCIDPWFASHSNCPLCRTPVQPETVSSHTEQCS--------VSVSEAGEGCSS---- 557
           FH  CID WF S S+CPLCR PVQP    + +E  +        V  +EAG   SS    
Sbjct: 136 FHVDCIDTWFRSRSSCPLCRAPVQPAQPVTESEPVAAVFPSVKPVEDTEAGSSSSSDESE 195

Query: 556 -------------FPEPIMCPRKP---LGIIVELPGA-ERGSDPVPGDHG 458
                        FP    C R P   +GIIVE+P   E  +  +PGD+G
Sbjct: 196 SSTPSSSSGSPVRFPME-ACERAPIDLIGIIVEIPREFEDSNSGLPGDNG 244


>ref|XP_002523110.1| RING-H2 finger protein ATL3L, putative [Ricinus communis]
           gi|223537672|gb|EEF39295.1| RING-H2 finger protein
           ATL3L, putative [Ricinus communis]
          Length = 239

 Score =  112 bits (281), Expect = 1e-22
 Identities = 71/145 (48%), Positives = 84/145 (57%), Gaps = 21/145 (14%)
 Frame = -2

Query: 877 TTTTYKEERLDPSILKSLPTFTYSSTSATHRRPLHDCAVCLSEFADGDECRTLPNCNHSF 698
           TT+    + LDPS+L SLP   Y  TS TH R L +CAVCLSEF +G++ R LP CNH+F
Sbjct: 76  TTSAVPSQGLDPSVLLSLPVLVY--TSKTHYRSL-ECAVCLSEFVEGEKGRVLPKCNHTF 132

Query: 697 HSRCIDPWFASHSNCPLCRTPVQ-PETVSSHTEQC-SVSVSE-------------AGEGC 563
           H  CID WF SHSNCPLCR P+Q  ETV S  E   SVS S+             +G G 
Sbjct: 133 HIPCIDMWFRSHSNCPLCRAPIQYAETVISVIEPSGSVSGSQPELRQKLEEEKGRSGGGS 192

Query: 562 SSFPEP---IMCPRKPL---GIIVE 506
           SS P     + C R PL    I+VE
Sbjct: 193 SSSPASLSLVECKRVPLDLASIVVE 217


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