BLASTX nr result

ID: Glycyrrhiza24_contig00000502 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000502
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555510.1| PREDICTED: RING-H2 finger protein ATL16-like...   183   1e-44
ref|XP_003535440.1| PREDICTED: RING-H2 finger protein ATL16-like...   179   2e-43
ref|XP_002281024.2| PREDICTED: RING-H2 finger protein ATL16-like...   140   1e-31
emb|CAN69298.1| hypothetical protein VITISV_043412 [Vitis vinifera]   140   1e-31
ref|XP_002314635.1| predicted protein [Populus trichocarpa] gi|2...   124   6e-27

>ref|XP_003555510.1| PREDICTED: RING-H2 finger protein ATL16-like [Glycine max]
          Length = 364

 Score =  183 bits (465), Expect = 1e-44
 Identities = 107/143 (74%), Positives = 113/143 (79%), Gaps = 7/143 (4%)
 Frame = -1

Query: 409 QNNANCPLCRTSISLTSRFHIDQLLNTTRPFSQ--QDQNPPVENLIGGDEDFVVIELGND 236
           Q+NANCPLCRT+ISLTSRFHIDQLLN  RP S    DQ PP ENLIGGDEDFVVIELG+D
Sbjct: 169 QSNANCPLCRTTISLTSRFHIDQLLNL-RPSSSYPHDQTPPRENLIGGDEDFVVIELGSD 227

Query: 235 HDRGQ---ERASALELPPACPNTISPS-PRKL-EHRTVEXXXXXXXXKVLSMGDECIDIR 71
           HDR Q   ER +ALELP  CP  ISPS PRKL EHR V+        KV SMGDECIDIR
Sbjct: 228 HDRSQNLQERGNALELP-TCP--ISPSSPRKLLEHRNVQKKKTMKLQKVTSMGDECIDIR 284

Query: 70  AKDEQFSVQPIRRSFSMDSSGDR 2
           AKD+QFSVQPIRRSFSMDSSGDR
Sbjct: 285 AKDDQFSVQPIRRSFSMDSSGDR 307


>ref|XP_003535440.1| PREDICTED: RING-H2 finger protein ATL16-like [Glycine max]
          Length = 367

 Score =  179 bits (454), Expect = 2e-43
 Identities = 108/145 (74%), Positives = 113/145 (77%), Gaps = 9/145 (6%)
 Frame = -1

Query: 409 QNNANCPLCRTSISLTSRFHIDQLLNTTRPFSQQ---DQNPPVENLIGGDEDFVVIELGN 239
           Q+NANCPLCRTSISLTSRFHIDQLL T RP S     DQ PP ENLIGGDEDFVVIELG+
Sbjct: 170 QSNANCPLCRTSISLTSRFHIDQLL-TLRPSSSSYPHDQTPPRENLIGGDEDFVVIELGS 228

Query: 238 DHDRG---QERASALELPPACPNTISP-SPRK-LEHRTVEXXXXXXXXKVLSMGDECIDI 74
           DHDR    QER +ALEL P CP  ISP SPRK LEHR V+        KV SMGDECIDI
Sbjct: 229 DHDRSQNLQERGNALEL-PTCP--ISPSSPRKLLEHRNVQKKKAMKLQKVTSMGDECIDI 285

Query: 73  RAKDEQ-FSVQPIRRSFSMDSSGDR 2
           RAKD+Q FSVQPIRRSFSMDSSGDR
Sbjct: 286 RAKDDQFFSVQPIRRSFSMDSSGDR 310


>ref|XP_002281024.2| PREDICTED: RING-H2 finger protein ATL16-like [Vitis vinifera]
          Length = 359

 Score =  140 bits (352), Expect = 1e-31
 Identities = 82/142 (57%), Positives = 93/142 (65%), Gaps = 6/142 (4%)
 Frame = -1

Query: 409 QNNANCPLCRTSISLTSRFHIDQLLNTTRPFSQQDQNPPVENLIGGDEDFVVIELGNDHD 230
           Q+NANCPLCRTSIS T RF + Q++  +   S QD +P   N IGGDEDFVVIELGND  
Sbjct: 171 QSNANCPLCRTSISTTPRFPVHQIIAPSS--SPQDPSPYANNYIGGDEDFVVIELGNDSS 228

Query: 229 ------RGQERASALELPPACPNTISPSPRKLEHRTVEXXXXXXXXKVLSMGDECIDIRA 68
                 R  ER ++ EL      +ISPSPRKLE R V          V SMGDECID R 
Sbjct: 229 ADSSLLRPPERLNSRELSAP---SISPSPRKLEQRIVPKKARKFHH-VASMGDECIDTRG 284

Query: 67  KDEQFSVQPIRRSFSMDSSGDR 2
           KD+QFS+QPIRRSFSMDSS DR
Sbjct: 285 KDDQFSIQPIRRSFSMDSSNDR 306


>emb|CAN69298.1| hypothetical protein VITISV_043412 [Vitis vinifera]
          Length = 419

 Score =  140 bits (352), Expect = 1e-31
 Identities = 82/142 (57%), Positives = 93/142 (65%), Gaps = 6/142 (4%)
 Frame = -1

Query: 409 QNNANCPLCRTSISLTSRFHIDQLLNTTRPFSQQDQNPPVENLIGGDEDFVVIELGNDHD 230
           Q+NANCPLCRTSIS T RF + Q++  +   S QD +P   N IGGDEDFVVIELGND  
Sbjct: 231 QSNANCPLCRTSISTTPRFPVHQIIAPSS--SPQDPSPYANNYIGGDEDFVVIELGNDSS 288

Query: 229 ------RGQERASALELPPACPNTISPSPRKLEHRTVEXXXXXXXXKVLSMGDECIDIRA 68
                 R  ER ++ EL      +ISPSPRKLE R V          V SMGDECID R 
Sbjct: 289 ADSSLLRPPERLNSRELSAP---SISPSPRKLEQRIVPKKARKFHH-VASMGDECIDTRG 344

Query: 67  KDEQFSVQPIRRSFSMDSSGDR 2
           KD+QFS+QPIRRSFSMDSS DR
Sbjct: 345 KDDQFSIQPIRRSFSMDSSNDR 366


>ref|XP_002314635.1| predicted protein [Populus trichocarpa] gi|222863675|gb|EEF00806.1|
           predicted protein [Populus trichocarpa]
          Length = 340

 Score =  124 bits (312), Expect = 6e-27
 Identities = 76/143 (53%), Positives = 94/143 (65%), Gaps = 7/143 (4%)
 Frame = -1

Query: 409 QNNANCPLCRTSISLTSRFHIDQLLNTTRPFSQQDQNPPVENLIGGDEDFVVIELGNDHD 230
           Q+NANCPLCRTSIS T+RF ID ++  +   +  D NP  E+++GGDED+VVIEL N + 
Sbjct: 151 QSNANCPLCRTSISSTTRFPIDHIIAPSS--TPHDANPYSESVMGGDEDYVVIELSNHNS 208

Query: 229 ------RGQERASALELPPACPNTISPSPRKLEHRTVEXXXXXXXXKVLSMGDECIDIRA 68
                   QER ++ EL      +ISPSPRK+E + V         KV SMGDECID R 
Sbjct: 209 TDQTLLAAQERLNSGEL---SARSISPSPRKIE-QGVGHKKARNLNKVTSMGDECIDTRG 264

Query: 67  KDEQFS-VQPIRRSFSMDSSGDR 2
           KD+QF  +QPIRRSFSMDSS DR
Sbjct: 265 KDDQFGLIQPIRRSFSMDSSADR 287


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