BLASTX nr result

ID: Glycyrrhiza24_contig00000451 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000451
         (1259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK39685.1| unknown [Medicago truncatula]                          350   4e-94
ref|XP_003543342.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   327   4e-87
gb|ACU20011.1| unknown [Glycine max]                                  324   3e-86
ref|XP_003540359.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H...   322   1e-85
ref|NP_001241324.1| uncharacterized protein LOC100786373 [Glycin...   275   1e-71

>gb|AFK39685.1| unknown [Medicago truncatula]
          Length = 247

 Score =  350 bits (898), Expect = 4e-94
 Identities = 173/240 (72%), Positives = 194/240 (80%), Gaps = 4/240 (1%)
 Frame = +1

Query: 298  MALNQYFEEAVPQIDSLKDESS-EKWKCTTADAIADSDKNASSGFDCNICLECVQDPVVT 474
            MA NQYFEE + QIDSL+++SS E WKC +A+AI+      SSGFDCNICLEC QDPVVT
Sbjct: 1    MAFNQYFEEGMNQIDSLEEKSSQEMWKCASAEAIS-----GSSGFDCNICLECAQDPVVT 55

Query: 475  LCGHLYCWPCIYKWLNFHSFSSENEEKQK--PQCPVCKSEISESSLVPLYGRGQTTPPSR 648
            LCGHLYCWPCIYKWLNFH+   EN+EKQK  PQCPVCKSEIS+SSLVPLYGRGQTTPPS+
Sbjct: 56   LCGHLYCWPCIYKWLNFHA---ENQEKQKEEPQCPVCKSEISKSSLVPLYGRGQTTPPSK 112

Query: 649  GKAHQVGLVMPPRPLGPSWMADLPRSLDTATLSP-TSQAXXXXXXXXXXXXTSPMLGTGG 825
            G  HQ+G V+PPRPLGPSWM +LPRSLD A +S   S+              SPML TGG
Sbjct: 113  GNDHQIGSVIPPRPLGPSWMTNLPRSLDAANVSQHNSRTYHPHYLNHSQRYASPMLNTGG 172

Query: 826  SLTSAFDTTYGVFGEMIYARIFGNQVTNIYTYPNSYDLSGISNPRIRRHLMRADKSLSRI 1005
            SL +  DT+YGVFGEM+YARIFGNQVTNIYTYPNSY+L+GISNPRIRRHLMRADKSL RI
Sbjct: 173  SLPNPLDTSYGVFGEMMYARIFGNQVTNIYTYPNSYNLTGISNPRIRRHLMRADKSLGRI 232


>ref|XP_003543342.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Glycine max]
          Length = 249

 Score =  327 bits (838), Expect = 4e-87
 Identities = 168/244 (68%), Positives = 190/244 (77%), Gaps = 8/244 (3%)
 Frame = +1

Query: 298  MALNQYFEEAVPQIDSLKDESS-EKWKCTTADAIADSDKNASSGFDCNICLECVQDPVVT 474
            MAL+QYF+EAVPQ+DSL+D+SS E WKC + D IADSD+NAS GFDCNICLECVQDPVVT
Sbjct: 1    MALDQYFDEAVPQLDSLEDKSSLETWKCGSDD-IADSDRNASGGFDCNICLECVQDPVVT 59

Query: 475  LCGHLYCWPCIYKWLNFHSFSSENEEKQKPQCPVCKSEISESSLVPLYGRGQTTPPSRGK 654
            LCGHLYCWPCIYKWLN  + SSENEE +K QCPVCKSEIS+SSLVPLYGRGQT  PS+GK
Sbjct: 60   LCGHLYCWPCIYKWLNLQTASSENEE-EKQQCPVCKSEISQSSLVPLYGRGQTVLPSKGK 118

Query: 655  AHQVGLVMPPRPLGPSWMADLPRSLDTATLS-PTSQAXXXXXXXXXXXXTS------PML 813
             HQVG+V+P RPLGP        +LD+AT+S P S               S       M 
Sbjct: 119  GHQVGVVIPRRPLGP--------TLDSATVSPPISHVYHRHYPNHPQQFNSIPGSYTSMF 170

Query: 814  GTGGSLTSAFDTTYGVFGEMIYARIFGNQVTNIYTYPNSYDLSGISNPRIRRHLMRADKS 993
             TGGSL +AFDTTYGVFGEMIYAR+FGNQ+TN YTYPNSYDLS  SNPRIRRHLM+ D+S
Sbjct: 171  NTGGSLANAFDTTYGVFGEMIYARVFGNQMTNTYTYPNSYDLSRNSNPRIRRHLMQVDRS 230

Query: 994  LSRI 1005
            L+RI
Sbjct: 231  LNRI 234


>gb|ACU20011.1| unknown [Glycine max]
          Length = 249

 Score =  324 bits (831), Expect = 3e-86
 Identities = 167/244 (68%), Positives = 189/244 (77%), Gaps = 8/244 (3%)
 Frame = +1

Query: 298  MALNQYFEEAVPQIDSLKDESS-EKWKCTTADAIADSDKNASSGFDCNICLECVQDPVVT 474
            MAL+QYF+EAVPQ+DSL+D+SS E WKC + D IADSD+NAS GFDCNICLECVQDPVVT
Sbjct: 1    MALDQYFDEAVPQLDSLEDKSSLETWKCGSDD-IADSDRNASGGFDCNICLECVQDPVVT 59

Query: 475  LCGHLYCWPCIYKWLNFHSFSSENEEKQKPQCPVCKSEISESSLVPLYGRGQTTPPSRGK 654
            LC HLYCWPCIYKWLN  + SSENEE +K QCPVCKSEIS+SSLVPLYGRGQT  PS+GK
Sbjct: 60   LCDHLYCWPCIYKWLNLQTASSENEE-EKQQCPVCKSEISQSSLVPLYGRGQTVLPSKGK 118

Query: 655  AHQVGLVMPPRPLGPSWMADLPRSLDTATLS-PTSQAXXXXXXXXXXXXTS------PML 813
             HQVG+V+P RPLGP        +LD+AT+S P S               S       M 
Sbjct: 119  GHQVGVVIPRRPLGP--------TLDSATVSPPISHVYHRHYPNHPQQFNSIPGSYTSMF 170

Query: 814  GTGGSLTSAFDTTYGVFGEMIYARIFGNQVTNIYTYPNSYDLSGISNPRIRRHLMRADKS 993
             TGGSL +AFDTTYGVFGEMIYAR+FGNQ+TN YTYPNSYDLS  SNPRIRRHLM+ D+S
Sbjct: 171  NTGGSLANAFDTTYGVFGEMIYARVFGNQMTNTYTYPNSYDLSRNSNPRIRRHLMQVDRS 230

Query: 994  LSRI 1005
            L+RI
Sbjct: 231  LNRI 234


>ref|XP_003540359.1| PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like isoform 1 [Glycine
            max] gi|356543825|ref|XP_003540360.1| PREDICTED: E3
            ubiquitin-protein ligase RMA1H1-like isoform 2 [Glycine
            max]
          Length = 248

 Score =  322 bits (826), Expect = 1e-85
 Identities = 168/244 (68%), Positives = 186/244 (76%), Gaps = 8/244 (3%)
 Frame = +1

Query: 298  MALNQYFEEAVPQIDSLKDESS-EKWKCTTADAIADSDKNASSGFDCNICLECVQDPVVT 474
            MAL+QYFEEA+PQ+DS +D+S  E WKC + D IADSD+NAS  FDCNICLECVQDPVVT
Sbjct: 1    MALDQYFEEAMPQLDSFEDKSFLETWKCDSDD-IADSDRNASGVFDCNICLECVQDPVVT 59

Query: 475  LCGHLYCWPCIYKWLNFHSFSSENEEKQKPQCPVCKSEISESSLVPLYGRGQTTPPSRGK 654
            LCGHLYCWPCIYKWLNF S S ENEEKQ  QCPVCKSEIS+SSLVPLYGRGQT  PS+GK
Sbjct: 60   LCGHLYCWPCIYKWLNFLSASCENEEKQ--QCPVCKSEISQSSLVPLYGRGQTELPSKGK 117

Query: 655  AHQVGLVMPPRPLGPSWMADLPRSLDTATLS-PTSQAXXXXXXXXXXXXT------SPML 813
             HQVG+V+P RPLGP        SLD+ T+S P S                     + M 
Sbjct: 118  GHQVGVVIPRRPLGP--------SLDSVTVSRPISHVYHRHYPNQPQQLNLIPGSYTSMF 169

Query: 814  GTGGSLTSAFDTTYGVFGEMIYARIFGNQVTNIYTYPNSYDLSGISNPRIRRHLMRADKS 993
             TGGSL +AFDTTYGVFGEMIYARIFGNQ+TN YTYPNSYDLSG SNPRIRRHLM+ D S
Sbjct: 170  NTGGSLANAFDTTYGVFGEMIYARIFGNQMTNTYTYPNSYDLSGNSNPRIRRHLMQVDSS 229

Query: 994  LSRI 1005
            L+RI
Sbjct: 230  LNRI 233


>ref|NP_001241324.1| uncharacterized protein LOC100786373 [Glycine max]
            gi|255635730|gb|ACU18214.1| unknown [Glycine max]
          Length = 240

 Score =  275 bits (704), Expect = 1e-71
 Identities = 146/246 (59%), Positives = 177/246 (71%), Gaps = 10/246 (4%)
 Frame = +1

Query: 298  MALNQYFEEAVPQIDSLKDESSEKWKCTTADAIADSDKNASSGFDCNICLECVQDPVVTL 477
            MAL+ +FEE V Q           WK ++++ IADSD+NAS  FDCNICLECVQDPVVTL
Sbjct: 1    MALD-HFEETVHQ--------KGNWK-SSSEIIADSDRNASGDFDCNICLECVQDPVVTL 50

Query: 478  CGHLYCWPCIYKWLNFHSFSSENEEKQKPQCPVCKSEISESSLVPLYGRGQTTPPSRGKA 657
            CGHLYCWPCIYKWL+F S S ++EE+Q+PQCPVCKSE+S+SSLVPLYGRGQTT PS+GK 
Sbjct: 51   CGHLYCWPCIYKWLHFQSTSLDDEEQQRPQCPVCKSEVSQSSLVPLYGRGQTTLPSKGKP 110

Query: 658  HQVGLVMPPRPLGPSWMADLPRSLDTATLS-PTSQA---------XXXXXXXXXXXXTSP 807
             QVG V+P RP G       PR+L+T ++S P SQ+                     TSP
Sbjct: 111  RQVGTVIPQRPHG-------PRTLNTRSVSQPISQSYHPYSNPYHPQQHFNSIPSGYTSP 163

Query: 808  MLGTGGSLTSAFDTTYGVFGEMIYARIFGNQVTNIYTYPNSYDLSGISNPRIRRHLMRAD 987
            M+ T GS+    D T+G+FGEMIYAR+FGN V+NI+TY NSY+LSG SNPR+RRHLM+ D
Sbjct: 164  MIRTTGSI----DNTFGIFGEMIYARVFGNHVSNIHTYANSYNLSGTSNPRMRRHLMQVD 219

Query: 988  KSLSRI 1005
            KSLSRI
Sbjct: 220  KSLSRI 225


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