BLASTX nr result

ID: Glycyrrhiza24_contig00000445 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000445
         (1585 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524438.1| PREDICTED: putative RING-H2 finger protein A...   485   e-134
emb|CBI23148.3| unnamed protein product [Vitis vinifera]              273   1e-70
ref|XP_002267722.2| PREDICTED: uncharacterized protein LOC100262...   266   9e-69
ref|NP_200123.2| RING/U-box domain-containing protein-like prote...   244   6e-62
ref|XP_002513558.1| ring finger protein, putative [Ricinus commu...   243   8e-62

>ref|XP_003524438.1| PREDICTED: putative RING-H2 finger protein ATL21B-like [Glycine max]
          Length = 582

 Score =  485 bits (1248), Expect = e-134
 Identities = 248/397 (62%), Positives = 290/397 (73%), Gaps = 6/397 (1%)
 Frame = -1

Query: 1384 SLALIYVFYVSVFHLQSTIRGKQI-CKSQACGDIDIQFPFGLKESNQDRSCSYYPNPSFQ 1208
            S  L+  F + + +LQST   KQI C +  CGDIDIQFPFGL+ SNQDR C YYP  SFQ
Sbjct: 4    SAILLCAFCIFLSNLQSTRGSKQINCNTLRCGDIDIQFPFGLRGSNQDRGCRYYPVQSFQ 63

Query: 1207 LSC-DNQSRAILSLPNSGDLVVKSIDYETQTIQVNDPDGCLPKRYMRDWNLS--GSPFKP 1037
            LSC    ++ IL+LP  G+L VKSIDYE+Q+I+VNDPDGCLPKR+++ W+LS   SPF  
Sbjct: 64   LSCLHGGTQTILTLPGFGNLTVKSIDYESQSIRVNDPDGCLPKRFLQKWSLSVSDSPFVL 123

Query: 1036 NPVIY--THFNLTFLRCPSNVTESFRLPLEPIPCLSDXXXXXXXXXXXXXXXXXXXXSVI 863
            NP+IY    FNLTFLRCPSNVT+S + PL PI CLS+                     VI
Sbjct: 124  NPMIYGTIPFNLTFLRCPSNVTDSSQYPLVPISCLSNNSNYS----------------VI 167

Query: 862  VSWVRPIVSSTLSSQTCEVISSHLVPLPSMDMPMWPFWPDLNSDVGLVWTEPRCGDCALS 683
             SW +PI+SS   SQ C+V+S  LVPLP +DMPMWPFWPDLN+D+ LVWTEP C +CALS
Sbjct: 168  ASWSQPIMSSPSLSQQCQVMSRALVPLPVLDMPMWPFWPDLNTDLDLVWTEPDCRNCALS 227

Query: 682  GQVCGFSDKDEKGLLRVGCFPXXXXXXXXXXSVKYGIAIAVGIPGLLCLIGFSCFICGKI 503
            GQVCGFS K++    +V CF             KYG+AI VGIPGLLCLIG SC ICGK+
Sbjct: 228  GQVCGFS-KEKTKTPQVRCFARDSTKGLSRS-AKYGLAIGVGIPGLLCLIGISCCICGKL 285

Query: 502  KMMRHRGWNTHIPSTISLEPIPFVMGLDGATIDKYPKTLLGESGRLLKPNDNTCAICLSE 323
               R    +  +P TISLEP+PFVMGLDGATIDKYPKTL+GESGRLLKPNDNTCAICLSE
Sbjct: 286  TNRRR---SADLPVTISLEPVPFVMGLDGATIDKYPKTLIGESGRLLKPNDNTCAICLSE 342

Query: 322  YEPKETLRSIPECNHYFHADCIDEWLKMNGTCPVCRN 212
            Y+PKETLRSIPECNHYFHADCIDEWL++N TCP+CRN
Sbjct: 343  YQPKETLRSIPECNHYFHADCIDEWLRLNATCPLCRN 379


>emb|CBI23148.3| unnamed protein product [Vitis vinifera]
          Length = 381

 Score =  273 bits (697), Expect = 1e-70
 Identities = 161/389 (41%), Positives = 216/389 (55%), Gaps = 5/389 (1%)
 Frame = -1

Query: 1363 FYVSVFHLQSTIRGKQICKSQAC--GDIDIQFPFGLKESNQDRSCSYYPNPSFQLSCDNQ 1190
            F  S+F L +     Q C+  +C   +++I+FPF L E +Q  SC Y   P F LSCD  
Sbjct: 20   FLFSIFLLSTMAANSQACEKSSCHRSELEIRFPFRL-EDHQPESCGY---PGFDLSCDAT 75

Query: 1189 SRAILSLPNSGDLVVKSIDYETQTIQVNDPDGCLPKRYMRDWNLSGSPFKPNPVIYTHFN 1010
             + IL LP SG+  V+ IDY TQ I +NDP  CLP R +   NLSGS F+    +Y H N
Sbjct: 76   MQTILKLP-SGEFSVQGIDYGTQEIWINDPKNCLP-RLILSLNLSGSSFRG---VYYH-N 129

Query: 1009 LTFLRCPSNVTESFRLPLEPIPCLSDXXXXXXXXXXXXXXXXXXXXSVIVSWVRPIVSST 830
             +F +C ++        L+ I CLSD                      +++++ P+    
Sbjct: 130  YSFFKCSADYR------LDSIACLSDDNYTVFATDSSR----------VINFLSPV---- 169

Query: 829  LSSQTCEVISSHLVP--LPSMDMPMWPFWPDLNSDVGLVWTEPRCGDCALSGQVCGFSDK 656
                 C++I S +VP  LP  D P+W    DL+SD+ L W  PRCGDC + G  CGF   
Sbjct: 170  -----CDLIKSVMVPAELPFYD-PVWT--SDLSSDLLLSWGAPRCGDCEMEGGRCGFRSN 221

Query: 655  DEKGLLRVGCFPXXXXXXXXXXSVKYGIAIAVGIPGLLCLIGFSCFICGKIKMMRHRGWN 476
                 L +GCF             +Y I + VGIP L+C +G  CF+CG++K    R   
Sbjct: 222  SS---LEIGCFDVPKRGLPRT--ARYAITVGVGIPALMCFVGLLCFLCGRVKAFGGRRRP 276

Query: 475  -THIPSTISLEPIPFVMGLDGATIDKYPKTLLGESGRLLKPNDNTCAICLSEYEPKETLR 299
                 S ++ +P   VMGLDG TI+ YPK +LGES RL KP+DNTC+ICLSEY PKETL+
Sbjct: 277  IAEFTSMVTPQPTA-VMGLDGPTIESYPKVVLGESRRLPKPDDNTCSICLSEYRPKETLK 335

Query: 298  SIPECNHYFHADCIDEWLKMNGTCPVCRN 212
             IPEC H FH++CIDEWL +N +CP+CRN
Sbjct: 336  IIPECQHCFHSECIDEWLHLNASCPICRN 364


>ref|XP_002267722.2| PREDICTED: uncharacterized protein LOC100262465 [Vitis vinifera]
          Length = 1054

 Score =  266 bits (681), Expect = 9e-69
 Identities = 157/374 (41%), Positives = 210/374 (56%), Gaps = 5/374 (1%)
 Frame = -1

Query: 1318 QICKSQAC--GDIDIQFPFGLKESNQDRSCSYYPNPSFQLSCDNQSRAILSLPNSGDLVV 1145
            Q C+  +C   +++I+FPF L E +Q  SC Y   P F LSCD   + IL LP SG+  V
Sbjct: 6    QACEKSSCHRSELEIRFPFRL-EDHQPESCGY---PGFDLSCDATMQTILKLP-SGEFSV 60

Query: 1144 KSIDYETQTIQVNDPDGCLPKRYMRDWNLSGSPFKPNPVIYTHFNLTFLRCPSNVTESFR 965
            + IDY TQ I +NDP  CLP R +   NLSGS F+    +Y H N +F +C ++      
Sbjct: 61   QGIDYGTQEIWINDPKNCLP-RLILSLNLSGSSFRG---VYYH-NYSFFKCSADYR---- 111

Query: 964  LPLEPIPCLSDXXXXXXXXXXXXXXXXXXXXSVIVSWVRPIVSSTLSSQTCEVISSHLVP 785
              L+ I CLSD                      +++++ P+         C++I S +VP
Sbjct: 112  --LDSIACLSDDNYTVFATDSSR----------VINFLSPV---------CDLIKSVMVP 150

Query: 784  --LPSMDMPMWPFWPDLNSDVGLVWTEPRCGDCALSGQVCGFSDKDEKGLLRVGCFPXXX 611
              LP  D P+W    DL+SD+ L W  PRCGDC + G  CGF        L +GCF    
Sbjct: 151  AELPFYD-PVWT--SDLSSDLLLSWGAPRCGDCEMEGGRCGFRSNSS---LEIGCFDVPK 204

Query: 610  XXXXXXXSVKYGIAIAVGIPGLLCLIGFSCFICGKIKMMRHRGWN-THIPSTISLEPIPF 434
                     +Y I + VGIP L+C +G  CF+CG++K    R        S ++ +P   
Sbjct: 205  RGLPRT--ARYAITVGVGIPALMCFVGLLCFLCGRVKAFGGRRRPIAEFTSMVTPQPTA- 261

Query: 433  VMGLDGATIDKYPKTLLGESGRLLKPNDNTCAICLSEYEPKETLRSIPECNHYFHADCID 254
            VMGLDG TI+ YPK +LGES RL KP+DNTC+ICLSEY PKETL+ IPEC H FH++CID
Sbjct: 262  VMGLDGPTIESYPKVVLGESRRLPKPDDNTCSICLSEYRPKETLKIIPECQHCFHSECID 321

Query: 253  EWLKMNGTCPVCRN 212
            EWL +N +CP+CRN
Sbjct: 322  EWLHLNASCPICRN 335



 Score = 82.0 bits (201), Expect = 4e-13
 Identities = 52/119 (43%), Positives = 71/119 (59%), Gaps = 3/119 (2%)
 Frame = -1

Query: 1282 IQFPFGLKESNQDRSCSYYPNPSFQLSCDNQSRAILSLPNSGDLVVKSIDYETQTIQVND 1103
            I+FPF LK+  Q   C Y   P F+LSC  + + +L LP S  L+VK IDY TQ I+V D
Sbjct: 495  IRFPFRLKD--QPDHCGY---PGFELSCTEKKQTVLDLPYSVKLLVKKIDYTTQEIRVQD 549

Query: 1102 PDGCLPKRYMRDWNLSGSPFK---PNPVIYTHFNLTFLRCPSNVTESFRLPLEPIPCLS 935
            PD CLP R +++ +L+GSPF+    N   Y   + TF+ C  N + + +  L  IPCLS
Sbjct: 550  PDNCLP-RQLQNLDLAGSPFQFELENSWDYFR-DFTFVNCSVNKSAN-QYNLRSIPCLS 605


>ref|NP_200123.2| RING/U-box domain-containing protein-like protein [Arabidopsis
            thaliana] gi|332008921|gb|AED96304.1| RING/U-box
            domain-containing protein-like protein [Arabidopsis
            thaliana]
          Length = 382

 Score =  244 bits (622), Expect = 6e-62
 Identities = 149/370 (40%), Positives = 194/370 (52%), Gaps = 13/370 (3%)
 Frame = -1

Query: 1282 IQFPFGLKESNQDRSCSYYPNPSFQLSCDNQS--RAILSLPNSGDLVVKSIDYETQTIQV 1109
            I+FPF LK   Q  SC Y  +  F L+CD  +  R  ++LP SG+  V+ IDY  Q I +
Sbjct: 42   IRFPFRLKHQ-QSHSCGY--DKGFDLTCDINAGNRTTITLPFSGNFTVEEIDYAAQEIWI 98

Query: 1108 NDPDGCLPKRYMRDWNLSGSPFKPNPVIYTHFNLTFLRCPSNVTESFRLPLEPIPCLSDX 929
            NDP+ CLP+R ++  NL+ +PF     +Y     TF  CP++    FR PL PI CLS  
Sbjct: 99   NDPNNCLPQRILQ-LNLNSTPFSG---VYMR-QFTFFNCPTSEYLRFR-PLNPITCLSGK 152

Query: 928  XXXXXXXXXXXXXXXXXXXSVIVSWVRPIVSSTLSSQTCEVISSHLVPLPSMDMPMWPFW 749
                                 + +   P V + LSSQ+C ++ +  VP+       WPF+
Sbjct: 153  NS------------------TVFATPSPRVINYLSSQSCRLMKTVYVPV------RWPFY 188

Query: 748  P------DLNSDVGLVWTEPRCGDCALSGQVCGFSDKDEKGLLRVGCFPXXXXXXXXXXS 587
                   DL+ ++ L W  PRC  C + G  CG      + ++   C             
Sbjct: 189  EQIVSSSDLSDNLWLTWRVPRCSRCEIKGGKCGIKSNSSREII---C--SHVHKPAIPRR 243

Query: 586  VKYGIAIAVGIPGLLCLIGFSCFICGKIKMMRHRGWNTHIPSTIS-----LEPIPFVMGL 422
             +Y IA+  GIPG L + G  CF+  KI     R      P   +     L     VMGL
Sbjct: 244  ARYAIAVGAGIPGALIVFGLFCFVYSKISSCIKRRRLVPTPEINNAQAHYLHSSVIVMGL 303

Query: 421  DGATIDKYPKTLLGESGRLLKPNDNTCAICLSEYEPKETLRSIPECNHYFHADCIDEWLK 242
            DG TI+ YPK +LGES RL K +D TCAICLSEYEPKETLR+IP+C H FHADCIDEWLK
Sbjct: 304  DGPTIESYPKIVLGESKRLPKVDDATCAICLSEYEPKETLRTIPQCQHCFHADCIDEWLK 363

Query: 241  MNGTCPVCRN 212
            +NGTCPVCRN
Sbjct: 364  LNGTCPVCRN 373


>ref|XP_002513558.1| ring finger protein, putative [Ricinus communis]
            gi|223547466|gb|EEF48961.1| ring finger protein, putative
            [Ricinus communis]
          Length = 377

 Score =  243 bits (621), Expect = 8e-62
 Identities = 149/392 (38%), Positives = 202/392 (51%), Gaps = 11/392 (2%)
 Frame = -1

Query: 1357 VSVFHLQSTIRGKQICKSQACGDID--IQFPFGLKESNQDRSCSYYPNPSFQLSCD-NQS 1187
            + +F     I  + +C + AC   +  I+FPF + E+ Q +SC Y   P F +SCD N +
Sbjct: 11   IFLFSFLQIIASQHLCLNSACARNEPVIRFPFRI-ENRQFKSCGY---PGFDVSCDTNTN 66

Query: 1186 RAILSLPNSGDLVVKSIDYETQTIQVNDPDGCLPKRYMRDWNLSGSPFKPNPVIYTHFNL 1007
              +L LP SG   V++IDY TQ + +NDP+ CLPKR +   NLS SPF    V   + N 
Sbjct: 67   HTLLELPYSGTFTVQAIDYATQELWINDPNNCLPKRIL-SLNLSNSPF----VGLFYQNF 121

Query: 1006 TFLRCPSNVTESFRLPLEPIPCLSDXXXXXXXXXXXXXXXXXXXXSVIVSWVRPIVSSTL 827
            TF  C  ++T      L PI CLS                      V  +    +++   
Sbjct: 122  TFFNC--SLTNYTNFQLNPIACLSSSTNT-----------------VFATSSLRVINHLS 162

Query: 826  SSQTCEVISSHLVPLPSMDMPMWPFW-----PDLNSDVGLVWTEPRCGDCALSGQVCGFS 662
               +CE  +S  VP+       WPF+      DL+ D+ L W  PRCG C   G  CG  
Sbjct: 163  GLSSCEAFASMEVPVE------WPFYGQILSSDLSDDLRLTWAVPRCGKCESHGGRCG-- 214

Query: 661  DKDEKGLLRVGCFPXXXXXXXXXXSVKYGIAIAVGIPGLLCLIGFSCFICGKIKMMRHRG 482
             +     L V   P            +Y I I  GIP  LC++G  CFIC +      R 
Sbjct: 215  PRSNSSRLIVCANPKLRGIPKS---ARYIITIGGGIPVALCVLGLLCFICNRASYYTGRR 271

Query: 481  WNTHIPST---ISLEPIPFVMGLDGATIDKYPKTLLGESGRLLKPNDNTCAICLSEYEPK 311
             +   P +   ++ +P     GLDG T++ YPK +LGES RL KP+D TC+ICLSEY+PK
Sbjct: 272  RSHLFPESNFVVNQQPTVSARGLDGQTLESYPKIVLGESRRLPKPDDITCSICLSEYKPK 331

Query: 310  ETLRSIPECNHYFHADCIDEWLKMNGTCPVCR 215
            ETL++IPEC H FHADCIDEWLK+N +CP+CR
Sbjct: 332  ETLKTIPECQHCFHADCIDEWLKLNASCPICR 363


Top