BLASTX nr result

ID: Glycyrrhiza24_contig00000433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000433
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001240146.1| chlorophyll a-b binding protein 21, chloropl...    63   2e-08
ref|XP_003548106.1| PREDICTED: chlorophyll a-b binding protein 2...    63   2e-08
gb|ACO55633.1| chloroplast photosystem II type I chlorophyll a/b...    62   4e-08
ref|XP_003548104.1| PREDICTED: chlorophyll a-b binding protein 2...    62   5e-08
gb|ACU23974.1| unknown [Glycine max]                                   62   5e-08

>ref|NP_001240146.1| chlorophyll a-b binding protein 21, chloroplastic-like [Glycine
           max] gi|506629|gb|AAA50172.1| photosystem II type I
           chlorophyll a/b-binding protein [Glycine max]
           gi|255636158|gb|ACU18421.1| unknown [Glycine max]
          Length = 264

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/37 (78%), Positives = 32/37 (86%)
 Frame = +1

Query: 169 GQVIKLAPSSQHLGHGRVTMRKAAAKTVSSGSPWYGP 279
           GQ IKLAPS+  LG GRV+MRK A+KTVSSGSPWYGP
Sbjct: 15  GQAIKLAPSTPELGVGRVSMRKTASKTVSSGSPWYGP 51


>ref|XP_003548106.1| PREDICTED: chlorophyll a-b binding protein 21, chloroplastic
           isoform 1 [Glycine max] gi|356559641|ref|XP_003548107.1|
           PREDICTED: chlorophyll a-b binding protein 21,
           chloroplastic isoform 2 [Glycine max]
           gi|356559643|ref|XP_003548108.1| PREDICTED: chlorophyll
           a-b binding protein 21, chloroplastic isoform 3 [Glycine
           max]
          Length = 264

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/37 (78%), Positives = 32/37 (86%)
 Frame = +1

Query: 169 GQVIKLAPSSQHLGHGRVTMRKAAAKTVSSGSPWYGP 279
           GQ IKLAPS+  LG GRV+MRK A+KTVSSGSPWYGP
Sbjct: 15  GQAIKLAPSTPQLGVGRVSMRKTASKTVSSGSPWYGP 51


>gb|ACO55633.1| chloroplast photosystem II type I chlorophyll a/b-binding protein
           [Arachis diogoi]
          Length = 69

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/37 (78%), Positives = 31/37 (83%)
 Frame = +1

Query: 169 GQVIKLAPSSQHLGHGRVTMRKAAAKTVSSGSPWYGP 279
           GQ IKL+PS+  LG GRVTMRKAA K VSSGSPWYGP
Sbjct: 15  GQAIKLSPSNPELGVGRVTMRKAATKQVSSGSPWYGP 51


>ref|XP_003548104.1| PREDICTED: chlorophyll a-b binding protein 21, chloroplastic-like
           [Glycine max]
          Length = 264

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/37 (75%), Positives = 32/37 (86%)
 Frame = +1

Query: 169 GQVIKLAPSSQHLGHGRVTMRKAAAKTVSSGSPWYGP 279
           GQ IKLAPS+  LG GRV+MRK A+KTV+SGSPWYGP
Sbjct: 15  GQAIKLAPSTPQLGVGRVSMRKTASKTVTSGSPWYGP 51


>gb|ACU23974.1| unknown [Glycine max]
          Length = 264

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 28/37 (75%), Positives = 32/37 (86%)
 Frame = +1

Query: 169 GQVIKLAPSSQHLGHGRVTMRKAAAKTVSSGSPWYGP 279
           GQ IKLAPS+  LG GRV+MRK A+KTV+SGSPWYGP
Sbjct: 15  GQAIKLAPSTPQLGVGRVSMRKTASKTVTSGSPWYGP 51


Top