BLASTX nr result

ID: Glycyrrhiza24_contig00000421 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000421
         (1089 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABU39903.1| photosystem I reaction center subunit XI [Olea eu...   133   7e-29
emb|CAB53034.1| photosystem I subunit XI precursor [Arabidopsis ...   129   1e-27
ref|XP_002863290.1| predicted protein [Arabidopsis lyrata subsp....   129   1e-27
gb|ACG24344.1| photosystem I reaction center subunit XI [Zea mays]    129   1e-27
ref|NP_193016.1| photosystem I reaction center subunit XI [Arabi...   129   1e-27

>gb|ABU39903.1| photosystem I reaction center subunit XI [Olea europaea]
          Length = 132

 Score =  133 bits (335), Expect = 7e-29
 Identities = 64/76 (84%), Positives = 67/76 (88%)
 Frame = +2

Query: 524 VILSICLTIYGISSFKEGEPSTAPSLTLTGRKKQPDQLQTADGWAKXXXXXXXXXISGVT 703
           VILS+CLTIYGISSFKEGEPSTAPSLTLTGRKK+PDQLQTA+GWAK         ISGVT
Sbjct: 57  VILSLCLTIYGISSFKEGEPSTAPSLTLTGRKKEPDQLQTAEGWAKFTGGFFFGGISGVT 116

Query: 704 WAYFLLYVLDLPYYFK 751
           WAYFLLYVLDLPYYFK
Sbjct: 117 WAYFLLYVLDLPYYFK 132


>emb|CAB53034.1| photosystem I subunit XI precursor [Arabidopsis thaliana]
          Length = 219

 Score =  129 bits (324), Expect = 1e-27
 Identities = 63/76 (82%), Positives = 65/76 (85%)
 Frame = +2

Query: 524 VILSICLTIYGISSFKEGEPSTAPSLTLTGRKKQPDQLQTADGWAKXXXXXXXXXISGVT 703
           VILS+CLTIYGISSFKEGEPS APSLTLTGRKKQPDQLQTADGWAK         ISGVT
Sbjct: 144 VILSMCLTIYGISSFKEGEPSIAPSLTLTGRKKQPDQLQTADGWAKFTGGFFFGGISGVT 203

Query: 704 WAYFLLYVLDLPYYFK 751
           WAYFLLYVLDLPY+ K
Sbjct: 204 WAYFLLYVLDLPYFVK 219



 Score = 80.5 bits (197), Expect = 7e-13
 Identities = 35/46 (76%), Positives = 43/46 (93%)
 Frame = +3

Query: 276 RRQFSFTVKAIQSEKPTYQVIQPINGDPFIGSLETPVTSSPLVAWY 413
           +R  SFTV+A++S+K T+QV+QPINGDPFIGSLETPVTSSPL+AWY
Sbjct: 42  KRVSSFTVRAVKSDKTTFQVVQPINGDPFIGSLETPVTSSPLIAWY 87


>ref|XP_002863290.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297309124|gb|EFH39549.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 219

 Score =  129 bits (324), Expect = 1e-27
 Identities = 63/76 (82%), Positives = 65/76 (85%)
 Frame = +2

Query: 524 VILSICLTIYGISSFKEGEPSTAPSLTLTGRKKQPDQLQTADGWAKXXXXXXXXXISGVT 703
           VILS+CLTIYGISSFKEGEPS APSLTLTGRKKQPDQLQTA+GWAK         ISGVT
Sbjct: 144 VILSMCLTIYGISSFKEGEPSIAPSLTLTGRKKQPDQLQTAEGWAKFTGGFFFGGISGVT 203

Query: 704 WAYFLLYVLDLPYYFK 751
           WAYFLLYVLDLPYY K
Sbjct: 204 WAYFLLYVLDLPYYVK 219



 Score = 87.0 bits (214), Expect = 7e-15
 Identities = 43/70 (61%), Positives = 52/70 (74%)
 Frame = +3

Query: 204 SSFTRPLVTPKGXXXXXXXXXXXXRRQFSFTVKAIQSEKPTYQVIQPINGDPFIGSLETP 383
           +S +R L  PKG            +R  SFTV+A++S+KPT+QVIQPINGDPFIGSLETP
Sbjct: 19  ASLSRRLAVPKGISGAPFGVSST-KRVSSFTVRAVKSDKPTFQVIQPINGDPFIGSLETP 77

Query: 384 VTSSPLVAWY 413
           VTSSPL+AWY
Sbjct: 78  VTSSPLIAWY 87


>gb|ACG24344.1| photosystem I reaction center subunit XI [Zea mays]
          Length = 219

 Score =  129 bits (324), Expect = 1e-27
 Identities = 63/76 (82%), Positives = 65/76 (85%)
 Frame = +2

Query: 524 VILSICLTIYGISSFKEGEPSTAPSLTLTGRKKQPDQLQTADGWAKXXXXXXXXXISGVT 703
           VILS+CLTIYGISSFKEGEPS APSLTLTGRKKQPDQLQTADGWAK         ISGVT
Sbjct: 144 VILSMCLTIYGISSFKEGEPSIAPSLTLTGRKKQPDQLQTADGWAKFTRGFFFGGISGVT 203

Query: 704 WAYFLLYVLDLPYYFK 751
           WAYFLLYVLDLPY+ K
Sbjct: 204 WAYFLLYVLDLPYFVK 219



 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 40/70 (57%), Positives = 51/70 (72%)
 Frame = +3

Query: 204 SSFTRPLVTPKGXXXXXXXXXXXXRRQFSFTVKAIQSEKPTYQVIQPINGDPFIGSLETP 383
           +S ++ L  PKG            +R  SFTV+A++S+K T+QV+QPINGDPFIGSLETP
Sbjct: 19  ASLSQRLAVPKGISGAPFGVSPT-KRVSSFTVRAVKSDKTTFQVVQPINGDPFIGSLETP 77

Query: 384 VTSSPLVAWY 413
           VTSSPL+AWY
Sbjct: 78  VTSSPLIAWY 87


>ref|NP_193016.1| photosystem I reaction center subunit XI [Arabidopsis thaliana]
           gi|18203449|sp|Q9SUI4.2|PSAL_ARATH RecName:
           Full=Photosystem I reaction center subunit XI,
           chloroplastic; Short=PSI-L; AltName: Full=PSI subunit V;
           Flags: Precursor gi|16226622|gb|AAL16216.1|AF428447_1
           AT4g12800/T20K18_150 [Arabidopsis thaliana]
           gi|17933283|gb|AAL48225.1|AF446350_1
           AT4g12800/T20K18_150 [Arabidopsis thaliana]
           gi|4586256|emb|CAB40997.1| probable photosystem I chain
           XI precursor [Arabidopsis thaliana]
           gi|7267981|emb|CAB78322.1| probable photosystem I chain
           XI precursor [Arabidopsis thaliana]
           gi|16649159|gb|AAL24431.1| probable photosystem I chain
           XI precursor [Arabidopsis thaliana]
           gi|20453409|gb|AAM19943.1| AT4g12800/T20K18_150
           [Arabidopsis thaliana] gi|21592939|gb|AAM64889.1|
           probable photosystem I chain XI precursor [Arabidopsis
           thaliana] gi|332657786|gb|AEE83186.1| photosystem I
           reaction center subunit XI [Arabidopsis thaliana]
          Length = 219

 Score =  129 bits (324), Expect = 1e-27
 Identities = 63/76 (82%), Positives = 65/76 (85%)
 Frame = +2

Query: 524 VILSICLTIYGISSFKEGEPSTAPSLTLTGRKKQPDQLQTADGWAKXXXXXXXXXISGVT 703
           VILS+CLTIYGISSFKEGEPS APSLTLTGRKKQPDQLQTADGWAK         ISGVT
Sbjct: 144 VILSMCLTIYGISSFKEGEPSIAPSLTLTGRKKQPDQLQTADGWAKFTGGFFFGGISGVT 203

Query: 704 WAYFLLYVLDLPYYFK 751
           WAYFLLYVLDLPY+ K
Sbjct: 204 WAYFLLYVLDLPYFVK 219



 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 40/70 (57%), Positives = 51/70 (72%)
 Frame = +3

Query: 204 SSFTRPLVTPKGXXXXXXXXXXXXRRQFSFTVKAIQSEKPTYQVIQPINGDPFIGSLETP 383
           +S ++ L  PKG            +R  SFTV+A++S+K T+QV+QPINGDPFIGSLETP
Sbjct: 19  ASLSQRLAVPKGISGAPFGVSPT-KRVSSFTVRAVKSDKTTFQVVQPINGDPFIGSLETP 77

Query: 384 VTSSPLVAWY 413
           VTSSPL+AWY
Sbjct: 78  VTSSPLIAWY 87


Top