BLASTX nr result

ID: Glycyrrhiza24_contig00000414 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000414
         (882 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538403.1| PREDICTED: U-box domain-containing protein 4...   388   e-105
ref|XP_003552957.1| PREDICTED: U-box domain-containing protein 4...   385   e-105
ref|XP_003545263.1| PREDICTED: U-box domain-containing protein 4...   322   9e-86
ref|XP_003519339.1| PREDICTED: U-box domain-containing protein 4...   321   1e-85
ref|XP_002302956.1| predicted protein [Populus trichocarpa] gi|2...   312   6e-83

>ref|XP_003538403.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 392

 Score =  388 bits (996), Expect = e-105
 Identities = 216/293 (73%), Positives = 225/293 (76%)
 Frame = +2

Query: 2   SSWEGNGAVDAVNWEAEEPRTPLAVRRALQLLNSGEAELRLQAARDIRRLTKTSQRCRRQ 181
           SS+  +G      +E EEPRTPLAVRRALQLLNSG+ +LRLQAARDIRRLTKTSQRCRRQ
Sbjct: 16  SSYSSDGVA---GFETEEPRTPLAVRRALQLLNSGQPDLRLQAARDIRRLTKTSQRCRRQ 72

Query: 182 LSEAVGPLVSMLRVDSPXXXXXXXXXXXXXXXXXXXXRVDSPESHESALLALLNLAVKDE 361
           LSEAVGPLVSMLRVDSP                         ESHE ALLALLNLAVKDE
Sbjct: 73  LSEAVGPLVSMLRVDSP-------------------------ESHEPALLALLNLAVKDE 107

Query: 362 KNKISIVEAGALEPIISFLKSQNPNLQEXXXXXXXXXXXXXXNKPIISACGAIPLLVDIL 541
           KNKI+IVEAGALEPIISFLKSQN NLQE              NKPIISACGAIPLLV IL
Sbjct: 108 KNKINIVEAGALEPIISFLKSQNLNLQESATASLLTLSASSTNKPIISACGAIPLLVKIL 167

Query: 542 RDGSPQAKADAVMALSNLSTHPNNLGIILETCPIPFIVDILKTCKKSSKTAEKCCALIES 721
           RDGSPQAKA+AVMALSNLSTHPNNL IIL+T PIPFIVD+LKTCKKSSKTAEKCCALIES
Sbjct: 168 RDGSPQAKAEAVMALSNLSTHPNNLRIILKTNPIPFIVDLLKTCKKSSKTAEKCCALIES 227

Query: 722 LVDYDEGRTALTSXXXXXXXXXXXXXNGTLQSREHAVGALLTMCQSDRCKYRE 880
           LVDYDEGRTALTS              GTLQSREHAVGALLTMCQSDRCKYRE
Sbjct: 228 LVDYDEGRTALTSEEGGVLAVVEVLEIGTLQSREHAVGALLTMCQSDRCKYRE 280


>ref|XP_003552957.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 384

 Score =  385 bits (988), Expect = e-105
 Identities = 211/284 (74%), Positives = 220/284 (77%)
 Frame = +2

Query: 29  DAVNWEAEEPRTPLAVRRALQLLNSGEAELRLQAARDIRRLTKTSQRCRRQLSEAVGPLV 208
           D V +E EEPRTPLAVRRALQLLNSG+ +LRLQAARDIRRLTKTSQRCRRQLS+AVGPLV
Sbjct: 14  DGVGFETEEPRTPLAVRRALQLLNSGDPDLRLQAARDIRRLTKTSQRCRRQLSQAVGPLV 73

Query: 209 SMLRVDSPXXXXXXXXXXXXXXXXXXXXRVDSPESHESALLALLNLAVKDEKNKISIVEA 388
           SMLRVDSP                         ESHE ALLALLNLAVKDEKNKI+IVEA
Sbjct: 74  SMLRVDSP-------------------------ESHEPALLALLNLAVKDEKNKINIVEA 108

Query: 389 GALEPIISFLKSQNPNLQEXXXXXXXXXXXXXXNKPIISACGAIPLLVDILRDGSPQAKA 568
           GALEPIISFLKSQN NLQE              NKPIISACG IPLLV ILRDGS QAKA
Sbjct: 109 GALEPIISFLKSQNLNLQESATASLLTLSASSTNKPIISACGVIPLLVQILRDGSHQAKA 168

Query: 569 DAVMALSNLSTHPNNLGIILETCPIPFIVDILKTCKKSSKTAEKCCALIESLVDYDEGRT 748
           DAVMALSNLSTH NNL IILET PIP++VD+LKTCKKSSKTAEKCCALIESLVDYDEGRT
Sbjct: 169 DAVMALSNLSTHTNNLSIILETNPIPYMVDLLKTCKKSSKTAEKCCALIESLVDYDEGRT 228

Query: 749 ALTSXXXXXXXXXXXXXNGTLQSREHAVGALLTMCQSDRCKYRE 880
           ALTS             +GTLQSREHAVGALLTMCQSDRCKYRE
Sbjct: 229 ALTSEEGGVLAVVEVLESGTLQSREHAVGALLTMCQSDRCKYRE 272


>ref|XP_003545263.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 371

 Score =  322 bits (824), Expect = 9e-86
 Identities = 183/278 (65%), Positives = 197/278 (70%), Gaps = 1/278 (0%)
 Frame = +2

Query: 50  EEPRTPLAVRRALQLLNSGEAELRLQAARDIRRLTKTSQRCRRQLSEAVGPLVSMLRVDS 229
           E   T +AVRRAL+LL   +  LR+QAARDIRRLTKTSQRCRRQL +AV PLVSMLRVDS
Sbjct: 7   EAEATAVAVRRALELLQLNDPVLRVQAARDIRRLTKTSQRCRRQLRQAVAPLVSMLRVDS 66

Query: 230 PXXXXXXXXXXXXXXXXXXXXRVDSPESHESALLALLNLAVKDEKNKISIVEAGALEPII 409
           P                         E HE ALLALLNLAV+DE NKISIVEAGALEPII
Sbjct: 67  P-------------------------EFHEPALLALLNLAVQDETNKISIVEAGALEPII 101

Query: 410 SFLKSQNPNLQEXXXXXXXXXXXXXXNKPIISACGAIPLLVDILRDGSPQAKADAVMALS 589
           SFLKSQNPN+QE              NKPIISACG IPLLV+ILRDGSPQAK DAV ALS
Sbjct: 102 SFLKSQNPNMQEYATASLLTLSASPTNKPIISACGTIPLLVNILRDGSPQAKVDAVTALS 161

Query: 590 NLS-THPNNLGIILETCPIPFIVDILKTCKKSSKTAEKCCALIESLVDYDEGRTALTSXX 766
           NLS T P NL IIL+T  +P IV +LKTC+KSSK AEKC ALIESLV Y+EGRT+LTS  
Sbjct: 162 NLSTTQPENLSIILQTNAMPLIVSLLKTCRKSSKIAEKCSALIESLVGYEEGRTSLTSEE 221

Query: 767 XXXXXXXXXXXNGTLQSREHAVGALLTMCQSDRCKYRE 880
                      NGT QSREHAVGALLTMCQSDRCKYRE
Sbjct: 222 GGVLAVVEVLENGTPQSREHAVGALLTMCQSDRCKYRE 259


>ref|XP_003519339.1| PREDICTED: U-box domain-containing protein 4-like [Glycine max]
          Length = 371

 Score =  321 bits (823), Expect = 1e-85
 Identities = 184/278 (66%), Positives = 197/278 (70%), Gaps = 1/278 (0%)
 Frame = +2

Query: 50  EEPRTPLAVRRALQLLNSGEAELRLQAARDIRRLTKTSQRCRRQLSEAVGPLVSMLRVDS 229
           E   T +AVRRAL+LL   +  LR+QAARDIRRLTKTSQRCRRQL +AV PLVSMLRVDS
Sbjct: 7   EAEATAVAVRRALELLQLNDPVLRVQAARDIRRLTKTSQRCRRQLRQAVAPLVSMLRVDS 66

Query: 230 PXXXXXXXXXXXXXXXXXXXXRVDSPESHESALLALLNLAVKDEKNKISIVEAGALEPII 409
                                     E HE ALLALLNLAV+DEKNKISIVEAGALEPII
Sbjct: 67  S-------------------------EFHEPALLALLNLAVQDEKNKISIVEAGALEPII 101

Query: 410 SFLKSQNPNLQEXXXXXXXXXXXXXXNKPIISACGAIPLLVDILRDGSPQAKADAVMALS 589
           SFLKS NPNLQE              NKPIISACG IPLLV+ILRDGSPQAK DAVMALS
Sbjct: 102 SFLKSPNPNLQEYATASLLTLSASPTNKPIISACGTIPLLVNILRDGSPQAKVDAVMALS 161

Query: 590 NLS-THPNNLGIILETCPIPFIVDILKTCKKSSKTAEKCCALIESLVDYDEGRTALTSXX 766
           NLS T P NL IILET  +PFIV +LKTC+KSSK AEKC ALIESLV Y++GR +LTS  
Sbjct: 162 NLSTTQPENLSIILETNAMPFIVSLLKTCRKSSKIAEKCSALIESLVGYEKGRISLTSEE 221

Query: 767 XXXXXXXXXXXNGTLQSREHAVGALLTMCQSDRCKYRE 880
                      NGT QSREHAVGALLTMCQSDRCKYRE
Sbjct: 222 GGVLAVVEVLENGTPQSREHAVGALLTMCQSDRCKYRE 259


>ref|XP_002302956.1| predicted protein [Populus trichocarpa] gi|222844682|gb|EEE82229.1|
           predicted protein [Populus trichocarpa]
          Length = 379

 Score =  312 bits (800), Expect = 6e-83
 Identities = 178/275 (64%), Positives = 197/275 (71%)
 Frame = +2

Query: 56  PRTPLAVRRALQLLNSGEAELRLQAARDIRRLTKTSQRCRRQLSEAVGPLVSMLRVDSPX 235
           P +  AVRRAL+L+ S +  L+++AA+DIRRLTKTSQRCRRQL++AV PLV MLRV    
Sbjct: 28  PSSSAAVRRALRLIQSEDLSLKIEAAKDIRRLTKTSQRCRRQLADAVKPLVCMLRVGDD- 86

Query: 236 XXXXXXXXXXXXXXXXXXXRVDSPESHESALLALLNLAVKDEKNKISIVEAGALEPIISF 415
                                DS E  ESALLALLNLAVKDEKNKISIVEAGALEPIISF
Sbjct: 87  ---------------------DSVELSESALLALLNLAVKDEKNKISIVEAGALEPIISF 125

Query: 416 LKSQNPNLQEXXXXXXXXXXXXXXNKPIISACGAIPLLVDILRDGSPQAKADAVMALSNL 595
           LKSQN  L+E              NK +ISA GAIPLLVDILR+G+ QAK DAVMALSNL
Sbjct: 126 LKSQNSILRECATASLLTLSASSINKQVISATGAIPLLVDILRNGNTQAKVDAVMALSNL 185

Query: 596 STHPNNLGIILETCPIPFIVDILKTCKKSSKTAEKCCALIESLVDYDEGRTALTSXXXXX 775
           STH NNL IIL+T PIP IV +LKTCKKSSKTAEKCCALIESLV + EGRTALTS     
Sbjct: 186 STHSNNLDIILKTNPIPSIVSLLKTCKKSSKTAEKCCALIESLVGFHEGRTALTSEEGGI 245

Query: 776 XXXXXXXXNGTLQSREHAVGALLTMCQSDRCKYRE 880
                   NG+LQSREHAVGALLT+CQSDR KYRE
Sbjct: 246 LAVVEVLENGSLQSREHAVGALLTLCQSDRFKYRE 280


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