BLASTX nr result

ID: Glycyrrhiza24_contig00000368 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000368
         (1888 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545990.1| PREDICTED: eukaryotic translation initiation...   911   0.0  
ref|XP_003543041.1| PREDICTED: eukaryotic translation initiation...   884   0.0  
ref|XP_004134552.1| PREDICTED: eukaryotic translation initiation...   867   0.0  
ref|XP_002264089.2| PREDICTED: eukaryotic translation initiation...   860   0.0  
ref|XP_002509464.1| eukaryotic translation initiation factor 3 s...   845   0.0  

>ref|XP_003545990.1| PREDICTED: eukaryotic translation initiation factor 3 subunit D-like
            isoform 1 [Glycine max] gi|356555340|ref|XP_003545991.1|
            PREDICTED: eukaryotic translation initiation factor 3
            subunit D-like isoform 2 [Glycine max]
          Length = 565

 Score =  911 bits (2354), Expect = 0.0
 Identities = 463/563 (82%), Positives = 469/563 (83%)
 Frame = +3

Query: 168  SFDIGAVPFNPDGWGPMDXXXXXXXXXXLPLNVPFAPFSRSDKLGRIADWTRNFNNPTRQ 347
            +FDIGAVPFN DGWGP D          LPLNVPFAPFSRSDKLGRIADWTRNFNNPTR 
Sbjct: 4    AFDIGAVPFNADGWGPPDNATSGSNNNNLPLNVPFAPFSRSDKLGRIADWTRNFNNPTRS 63

Query: 348  KNPADSAFDFTNDDSFPANADDDSSFRLVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 527
            KNPAD+ FDF NDDSFPA+ADDD+SFRLVD                              
Sbjct: 64   KNPADAVFDFANDDSFPASADDDASFRLVDGKPPPRPKFGPKWRFQQQRQLPQRRDEEVE 123

Query: 528  XXXXXXXXXXXXXXXLYHQNRSNPNNPRREAAVFKSSVDIQPEWNMHDQIPFSTFSKLSF 707
                           LYH NRSNPN  RREAAVFKSSVDIQPEWNMHDQIPFSTFSKLSF
Sbjct: 124  AKKREQEKERARRDRLYHMNRSNPNQQRREAAVFKSSVDIQPEWNMHDQIPFSTFSKLSF 183

Query: 708  TVPEPEDLLLCGALEYYDRSYDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKA 887
            TVPEPEDLLLCGALEYYDR+YDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKA
Sbjct: 184  TVPEPEDLLLCGALEYYDRTYDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKA 243

Query: 888  TVFATDTILSTLMCAPRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPEAK 1067
            TVFATDTILSTLMCAPRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPE+K
Sbjct: 244  TVFATDTILSTLMCAPRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPESK 303

Query: 1068 DDINSAHSLSVEAAYINQNFSQQVLIRDGNKVTFDEPNPFANEGEEVASVAYRYRRWKLD 1247
            DDINSAHSLSVEAAYINQNFSQQVLIRDGNKVTFDE NPFANEGEEVASVAYRYRRWKLD
Sbjct: 304  DDINSAHSLSVEAAYINQNFSQQVLIRDGNKVTFDEANPFANEGEEVASVAYRYRRWKLD 363

Query: 1248 DDMYLVARCEVQSVVDVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNN 1427
            DDMYLVARCEV SVVDVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNN
Sbjct: 364  DDMYLVARCEVHSVVDVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNN 423

Query: 1428 ANKLAKWTAQALLASADMMKLGYVSRIHPRDHFNHVILAVVGYKPRDFAAQINLNTANMW 1607
            ANKLAKWTAQALLASAD MKLGYVSRIHPRDHFNHVILAVVGYKPRDFAAQINLNT NMW
Sbjct: 424  ANKLAKWTAQALLASADTMKLGYVSRIHPRDHFNHVILAVVGYKPRDFAAQINLNTTNMW 483

Query: 1608 GIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYXXXXXXXXXXXXXXXXX 1787
            GIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDY                 
Sbjct: 484  GIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDY-VEEPLPEDEQVQPPAE 542

Query: 1788 XXXXXXXXXTTNDVEDKQIDDQA 1856
                     TTNDVEDKQID QA
Sbjct: 543  GAEGGEAAATTNDVEDKQIDGQA 565


>ref|XP_003543041.1| PREDICTED: eukaryotic translation initiation factor 3 subunit D-like
            [Glycine max]
          Length = 557

 Score =  884 bits (2284), Expect = 0.0
 Identities = 454/563 (80%), Positives = 461/563 (81%)
 Frame = +3

Query: 168  SFDIGAVPFNPDGWGPMDXXXXXXXXXXLPLNVPFAPFSRSDKLGRIADWTRNFNNPTRQ 347
            +FDIGAVPFN +GWGP D          LPLNVPFAPFSRSDKLGRIADWTRNFNNPTR 
Sbjct: 4    AFDIGAVPFNAEGWGPPDSTITGSNIN-LPLNVPFAPFSRSDKLGRIADWTRNFNNPTRS 62

Query: 348  KNPADSAFDFTNDDSFPANADDDSSFRLVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 527
            KNPAD+ FDFTNDD       DD +F LVD                              
Sbjct: 63   KNPADAVFDFTNDD-------DDDTFHLVDPKPPPRPKFGPKWRFPQQRQLPQRRDEEVE 115

Query: 528  XXXXXXXXXXXXXXXLYHQNRSNPNNPRREAAVFKSSVDIQPEWNMHDQIPFSTFSKLSF 707
                           LYH NRSNPN  RREAAVFKSSVDIQPEWNMHDQIPFSTFSKLSF
Sbjct: 116  AKKREQEKERARRDRLYHMNRSNPNQQRREAAVFKSSVDIQPEWNMHDQIPFSTFSKLSF 175

Query: 708  TVPEPEDLLLCGALEYYDRSYDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLANEDKA 887
            TVPEPEDLLLCGALEYYDR+YDRITPKNERRLERFKNRNFFKVTTTDDP+IRRLANEDKA
Sbjct: 176  TVPEPEDLLLCGALEYYDRTYDRITPKNERRLERFKNRNFFKVTTTDDPIIRRLANEDKA 235

Query: 888  TVFATDTILSTLMCAPRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPEAK 1067
            TVFATDTILSTLMCAPRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPE+K
Sbjct: 236  TVFATDTILSTLMCAPRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHETSQEPLPESK 295

Query: 1068 DDINSAHSLSVEAAYINQNFSQQVLIRDGNKVTFDEPNPFANEGEEVASVAYRYRRWKLD 1247
            DDINSAHSLSVEAAYINQNFSQQVLIRDGNKVTFDE NPFANEGEEVASVAYRYRRWKLD
Sbjct: 296  DDINSAHSLSVEAAYINQNFSQQVLIRDGNKVTFDEANPFANEGEEVASVAYRYRRWKLD 355

Query: 1248 DDMYLVARCEVQSVVDVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNN 1427
            DDMYLVARCEV SVVDVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNN
Sbjct: 356  DDMYLVARCEVHSVVDVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATELKNN 415

Query: 1428 ANKLAKWTAQALLASADMMKLGYVSRIHPRDHFNHVILAVVGYKPRDFAAQINLNTANMW 1607
            ANKLAKWTAQALLASAD MKLGYVSRIHPRDHFNHVILAVVGYKPRDFAAQINLNT NMW
Sbjct: 416  ANKLAKWTAQALLASADTMKLGYVSRIHPRDHFNHVILAVVGYKPRDFAAQINLNTTNMW 475

Query: 1608 GIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYXXXXXXXXXXXXXXXXX 1787
            GIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDY                 
Sbjct: 476  GIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDY-VEEPLPEDEQVQPPSE 534

Query: 1788 XXXXXXXXXTTNDVEDKQIDDQA 1856
                     TTNDVEDKQID QA
Sbjct: 535  GAEGGEATTTTNDVEDKQIDGQA 557


>ref|XP_004134552.1| PREDICTED: eukaryotic translation initiation factor 3 subunit D-like
            [Cucumis sativus] gi|449506762|ref|XP_004162841.1|
            PREDICTED: eukaryotic translation initiation factor 3
            subunit D-like [Cucumis sativus]
          Length = 566

 Score =  867 bits (2239), Expect = 0.0
 Identities = 434/527 (82%), Positives = 452/527 (85%), Gaps = 1/527 (0%)
 Frame = +3

Query: 159  MVGSFDIGAVPFNPDGWGPMDXXXXXXXXXXLPLNVPFAPFSRSDKLGRIADWTRNFNNP 338
            MVG F++GAVP+NPDGWGP D          LPLNVPFAPFSRSDKLGRIADWTR  NNP
Sbjct: 1    MVGGFEVGAVPYNPDGWGPPDSTATLVASSNLPLNVPFAPFSRSDKLGRIADWTRTMNNP 60

Query: 339  TRQKNPADSAFDFTNDDSFPANADDDSSFRLVDXXXXXXXXXXXXXXXXXXXXXXXXXXX 518
             R K  +DS FDFTNDDSFPANAD+D SFRLVD                           
Sbjct: 61   GRPKTASDSVFDFTNDDSFPANADEDMSFRLVDGKPPPRPKFGPKWRFNQQRTQLPQRRD 120

Query: 519  XXXXXXXXXXXXXXXXXX-LYHQNRSNPNNPRREAAVFKSSVDIQPEWNMHDQIPFSTFS 695
                               LY+ NRSN N PRREAAVFKSSV+IQPEWNM DQIPFSTFS
Sbjct: 121  EEVEARKREAEKERARRDRLYNLNRSNVNAPRREAAVFKSSVEIQPEWNMLDQIPFSTFS 180

Query: 696  KLSFTVPEPEDLLLCGALEYYDRSYDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLAN 875
            KLSF+VPEPEDLLLCG LE+YDR+YDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLAN
Sbjct: 181  KLSFSVPEPEDLLLCGGLEFYDRAYDRITPKNERRLERFKNRNFFKVTTTDDPVIRRLAN 240

Query: 876  EDKATVFATDTILSTLMCAPRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHETSQEPL 1055
            EDKATVFATD ILSTLMCA RSVYSWDIVVQRVGNKLFFDKRDGSQLDLL+VHETSQEPL
Sbjct: 241  EDKATVFATDAILSTLMCATRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLAVHETSQEPL 300

Query: 1056 PEAKDDINSAHSLSVEAAYINQNFSQQVLIRDGNKVTFDEPNPFANEGEEVASVAYRYRR 1235
            PEAKDDINSA+SLSVEAAYINQNFSQQVL+RDGNKV FDEPNPFANEGEEVASVAYRYRR
Sbjct: 301  PEAKDDINSAYSLSVEAAYINQNFSQQVLVRDGNKVAFDEPNPFANEGEEVASVAYRYRR 360

Query: 1236 WKLDDDMYLVARCEVQSVVDVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATE 1415
            WKLDDDMYLVARCEVQSV++VNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATE
Sbjct: 361  WKLDDDMYLVARCEVQSVMEVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVLATE 420

Query: 1416 LKNNANKLAKWTAQALLASADMMKLGYVSRIHPRDHFNHVILAVVGYKPRDFAAQINLNT 1595
            LKNNANKLAKWTAQALLASADMMKLGYVSR+HPRDHFNHVILAVVGYKP+DFA QINLNT
Sbjct: 421  LKNNANKLAKWTAQALLASADMMKLGYVSRVHPRDHFNHVILAVVGYKPKDFAGQINLNT 480

Query: 1596 ANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDY 1736
            +NMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDY
Sbjct: 481  SNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDY 527


>ref|XP_002264089.2| PREDICTED: eukaryotic translation initiation factor 3 subunit D-like
            [Vitis vinifera]
          Length = 567

 Score =  860 bits (2222), Expect = 0.0
 Identities = 433/530 (81%), Positives = 456/530 (86%), Gaps = 4/530 (0%)
 Frame = +3

Query: 159  MVGSFDIGAVPFNPDGWGPMDXXXXXXXXXXLPLNVPFAPFSRSDKLGRIADWTRNFNNP 338
            MVG F++GAVPFNPDGWGP +           P+NVPFAPFSRSDKLGRIADWTR +NNP
Sbjct: 1    MVGGFEVGAVPFNPDGWGPPESASPHLPNH--PINVPFAPFSRSDKLGRIADWTRTYNNP 58

Query: 339  TRQ--KNPADSAFDFTNDDSFPAN--ADDDSSFRLVDXXXXXXXXXXXXXXXXXXXXXXX 506
            +R   +NP+DS FDFT DDSF A   AD+DSSFRLVD                       
Sbjct: 59   SRNPLRNPSDSVFDFTGDDSFGAGIAADEDSSFRLVDGKPPPRPKFGPKWRFQQQRQLPQ 118

Query: 507  XXXXXXXXXXXXXXXXXXXXXXLYHQNRSNPNNPRREAAVFKSSVDIQPEWNMHDQIPFS 686
                                  LY+ NRS  NN RREAAVFKSSVDIQPEWNM DQIPFS
Sbjct: 119  RRDEEVEARKREAEKERARRDRLYNLNRSGGNNQRREAAVFKSSVDIQPEWNMLDQIPFS 178

Query: 687  TFSKLSFTVPEPEDLLLCGALEYYDRSYDRITPKNERRLERFKNRNFFKVTTTDDPVIRR 866
            TFSKLSF+VPEPEDLLLCGALE+YDRSYDR+TPKNERRLERFKNRNFFKVTTTDDPVIRR
Sbjct: 179  TFSKLSFSVPEPEDLLLCGALEFYDRSYDRVTPKNERRLERFKNRNFFKVTTTDDPVIRR 238

Query: 867  LANEDKATVFATDTILSTLMCAPRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLSVHETSQ 1046
            LANEDKATVFATD+ILSTLMCAPRSVYSWDIV+QRVGNKLFFDKRDGSQLDLLSVHETSQ
Sbjct: 239  LANEDKATVFATDSILSTLMCAPRSVYSWDIVIQRVGNKLFFDKRDGSQLDLLSVHETSQ 298

Query: 1047 EPLPEAKDDINSAHSLSVEAAYINQNFSQQVLIRDGNKVTFDEPNPFANEGEEVASVAYR 1226
            EPLPEAK+DINSA+SLSVEAAYINQNFSQQVLIRDGNKVTF+EPNPFANEGEEVASVAYR
Sbjct: 299  EPLPEAKEDINSAYSLSVEAAYINQNFSQQVLIRDGNKVTFEEPNPFANEGEEVASVAYR 358

Query: 1227 YRRWKLDDDMYLVARCEVQSVVDVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVL 1406
            YRRWKLDDDMYLVARCEVQSVV+VNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVL
Sbjct: 359  YRRWKLDDDMYLVARCEVQSVVEVNKQRSFLTLNALNEFDPKYSGVDWRQKLETQRGAVL 418

Query: 1407 ATELKNNANKLAKWTAQALLASADMMKLGYVSRIHPRDHFNHVILAVVGYKPRDFAAQIN 1586
            ATELKNNANKLAKWTAQALLASAD+MKLGYVSR+HPRDHFNHVILAVVGYKPR+FAAQIN
Sbjct: 419  ATELKNNANKLAKWTAQALLASADLMKLGYVSRVHPRDHFNHVILAVVGYKPREFAAQIN 478

Query: 1587 LNTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDY 1736
            LNT NMWGI+KSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDY
Sbjct: 479  LNTTNMWGIIKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDY 528


>ref|XP_002509464.1| eukaryotic translation initiation factor 3 subunit, putative [Ricinus
            communis] gi|223549363|gb|EEF50851.1| eukaryotic
            translation initiation factor 3 subunit, putative
            [Ricinus communis]
          Length = 574

 Score =  845 bits (2182), Expect = 0.0
 Identities = 441/576 (76%), Positives = 462/576 (80%), Gaps = 10/576 (1%)
 Frame = +3

Query: 159  MVGSFDIGAVPFNPDGWGPMDXXXXXXXXXX--LPLNVPFAPFSRSDKLGRIADWTRNFN 332
            MVG F++G VPFNPDGWGP D            LPLNVPFAPFSRSDKLGRIADWTRN N
Sbjct: 1    MVG-FEVGFVPFNPDGWGPPDAAFASAATTTSTLPLNVPFAPFSRSDKLGRIADWTRNIN 59

Query: 333  ----NPTRQKNPADSAFDFTNDDSFPANA---DDDSSFRLVDXXXXXXXXXXXXXXXXXX 491
                 P  ++N +DS FDFT DDSFPA     DDDS+FRLVD                  
Sbjct: 60   PNANRPNSKQNASDSVFDFTADDSFPAATAAGDDDSTFRLVDGKPPPRPKFGPKWRFNQH 119

Query: 492  XXXXXXXXXXXXXXXXXXXXXXXXXXX-LYHQNRSNPNNPRREAAVFKSSVDIQPEWNMH 668
                                        LY+ NRSN N PRREAAVFKSSVDIQPEWNM 
Sbjct: 120  RQQLPQRRDEEVEARKREAEKERARRDRLYNMNRSNQNQPRREAAVFKSSVDIQPEWNML 179

Query: 669  DQIPFSTFSKLSFTVPEPEDLLLCGALEYYDRSYDRITPKNERRLERFKNRNFFKVTTTD 848
            DQIPFSTFSKLSF+VPEPEDLLLCG LE+YDRS+DRITPKNERRLERFKNRNFFKVTTTD
Sbjct: 180  DQIPFSTFSKLSFSVPEPEDLLLCGGLEFYDRSFDRITPKNERRLERFKNRNFFKVTTTD 239

Query: 849  DPVIRRLANEDKATVFATDTILSTLMCAPRSVYSWDIVVQRVGNKLFFDKRDGSQLDLLS 1028
            DPVIRRLANEDKATVFATDTIL+TLMCAPRSVYSWDIV+QRVGNKLFFDKRDGSQLDLLS
Sbjct: 240  DPVIRRLANEDKATVFATDTILATLMCAPRSVYSWDIVIQRVGNKLFFDKRDGSQLDLLS 299

Query: 1029 VHETSQEPLPEAKDDINSAHSLSVEAAYINQNFSQQVLIRDGNKVTFDEPNPFANEGEEV 1208
            VHETSQEPLPEAKDD+NSA+SLSVEAAYINQNFSQQVLIRDGNKV+FDEPNPFA EGEEV
Sbjct: 300  VHETSQEPLPEAKDDMNSAYSLSVEAAYINQNFSQQVLIRDGNKVSFDEPNPFATEGEEV 359

Query: 1209 ASVAYRYRRWKLDDDMYLVARCEVQSVVDVNKQRSFLTLNALNEFDPKYSGVDWRQKLET 1388
            ASVAYRYRRWKLDDDM+LVARCEVQSVV+VNKQRSFLTLNALNEFDPKYSGVDWRQKLET
Sbjct: 360  ASVAYRYRRWKLDDDMHLVARCEVQSVVEVNKQRSFLTLNALNEFDPKYSGVDWRQKLET 419

Query: 1389 QRGAVLATELKNNANKLAKWTAQALLASADMMKLGYVSRIHPRDHFNHVILAVVGYKPRD 1568
            QRGAVLATELKNNANKLAKWTAQALLASAD+MKLGYVSR+HPRDH+NHVILAVVGYKPRD
Sbjct: 420  QRGAVLATELKNNANKLAKWTAQALLASADLMKLGYVSRVHPRDHYNHVILAVVGYKPRD 479

Query: 1569 FAAQINLNTANMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYXXXX 1748
            FAAQINLNT+NMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDY    
Sbjct: 480  FAAQINLNTSNMWGIVKSIVDLCMKLNEGKYVLVKDPSKPQVRIYEVPADAFENDYVEEP 539

Query: 1749 XXXXXXXXXXXXXXXXXXXXXXTTNDVEDKQIDDQA 1856
                                  T  DVE K ID QA
Sbjct: 540  LPEEEQVQPPGEDTENAEANGGTV-DVEAKDIDAQA 574


Top