BLASTX nr result

ID: Glycyrrhiza24_contig00000325 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000325
         (1177 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003547944.1| PREDICTED: 60S ribosomal protein L8-3-like [...   509   e-142
gb|ACU19917.1| unknown [Glycine max]                                  509   e-142
ref|XP_003623912.1| 60S ribosomal protein L2 [Medicago truncatul...   506   e-141
ref|XP_004134871.1| PREDICTED: 60S ribosomal protein L8-like [Cu...   504   e-140
ref|XP_003537629.1| PREDICTED: 60S ribosomal protein L8-3-like [...   504   e-140

>ref|XP_003547944.1| PREDICTED: 60S ribosomal protein L8-3-like [Glycine max]
          Length = 260

 Score =  509 bits (1312), Expect = e-142
 Identities = 243/249 (97%), Positives = 247/249 (99%)
 Frame = +3

Query: 69  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDVIHDPGRGAPLAK 248
           MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDVIHDPGRGAPLAK
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDVIHDPGRGAPLAK 60

Query: 249 VTFRHPFRYKKQNELFVAAEGIYTGQFIYCGKKANLVVGNVLPLRSIPEGAVICNVEHHV 428
           V FRHPFRYKKQNELF+AAEG+YTGQFIYCGKKA LVVGNVLPLRSIPEGAVICNVEHHV
Sbjct: 61  VAFRHPFRYKKQNELFIAAEGLYTGQFIYCGKKATLVVGNVLPLRSIPEGAVICNVEHHV 120

Query: 429 GDRGVFARASGDYAIVISHNPDNDTSRIKLPSGAKKIVPSDCRAMIGQVAGGGRTEKPLL 608
           GDRGVFARASGDYAIVISHNPDNDTSRIKLPSG+KKIVPSDCRAMIGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARASGDYAIVISHNPDNDTSRIKLPSGSKKIVPSDCRAMIGQVAGGGRTEKPLL 180

Query: 609 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 788
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 789 KRTGRLRGQ 815
           +RTGRLRGQ
Sbjct: 241 RRTGRLRGQ 249


>gb|ACU19917.1| unknown [Glycine max]
          Length = 260

 Score =  509 bits (1312), Expect = e-142
 Identities = 243/249 (97%), Positives = 247/249 (99%)
 Frame = +3

Query: 69  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDVIHDPGRGAPLAK 248
           MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDVIHDPGRGAPLAK
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDVIHDPGRGAPLAK 60

Query: 249 VTFRHPFRYKKQNELFVAAEGIYTGQFIYCGKKANLVVGNVLPLRSIPEGAVICNVEHHV 428
           V FRHPFRYKKQNELF+AAEG+YTGQFIYCGKKA LVVGNVLPLRSIPEGAVICNVEHHV
Sbjct: 61  VAFRHPFRYKKQNELFIAAEGLYTGQFIYCGKKATLVVGNVLPLRSIPEGAVICNVEHHV 120

Query: 429 GDRGVFARASGDYAIVISHNPDNDTSRIKLPSGAKKIVPSDCRAMIGQVAGGGRTEKPLL 608
           GDRGVFARASGDYAIVISHNPDNDTSRIKLPSG+KKIVPSDCRAMIGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARASGDYAIVISHNPDNDTSRIKLPSGSKKIVPSDCRAMIGQVAGGGRTEKPLL 180

Query: 609 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 788
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 789 KRTGRLRGQ 815
           +RTGRLRGQ
Sbjct: 241 RRTGRLRGQ 249


>ref|XP_003623912.1| 60S ribosomal protein L2 [Medicago truncatula]
           gi|355498927|gb|AES80130.1| 60S ribosomal protein L2
           [Medicago truncatula] gi|388498064|gb|AFK37098.1|
           unknown [Medicago truncatula]
          Length = 259

 Score =  506 bits (1302), Expect = e-141
 Identities = 243/249 (97%), Positives = 246/249 (98%)
 Frame = +3

Query: 69  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDVIHDPGRGAPLAK 248
           MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDVIHDPGRGAPLAK
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDVIHDPGRGAPLAK 60

Query: 249 VTFRHPFRYKKQNELFVAAEGIYTGQFIYCGKKANLVVGNVLPLRSIPEGAVICNVEHHV 428
           VTFRHPFRY+KQ ELFVAAEG+YTGQFIYCGKKA LVVGNVLPLRSIPEGAVICNVE HV
Sbjct: 61  VTFRHPFRYQKQKELFVAAEGLYTGQFIYCGKKATLVVGNVLPLRSIPEGAVICNVEGHV 120

Query: 429 GDRGVFARASGDYAIVISHNPDNDTSRIKLPSGAKKIVPSDCRAMIGQVAGGGRTEKPLL 608
           GDRGVFARASGDYAIVISHNPDNDTSRIKLPSGAKKIVPSDCRAMIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARASGDYAIVISHNPDNDTSRIKLPSGAKKIVPSDCRAMIGQVAGGGRTEKPML 180

Query: 609 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 788
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 789 KRTGRLRGQ 815
           KRTGRLRGQ
Sbjct: 241 KRTGRLRGQ 249


>ref|XP_004134871.1| PREDICTED: 60S ribosomal protein L8-like [Cucumis sativus]
           gi|449491368|ref|XP_004158874.1| PREDICTED: 60S
           ribosomal protein L8-like [Cucumis sativus]
          Length = 260

 Score =  504 bits (1297), Expect = e-140
 Identities = 237/249 (95%), Positives = 247/249 (99%)
 Frame = +3

Query: 69  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDVIHDPGRGAPLAK 248
           MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVT++IHDPGRGAPLA+
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTEIIHDPGRGAPLAR 60

Query: 249 VTFRHPFRYKKQNELFVAAEGIYTGQFIYCGKKANLVVGNVLPLRSIPEGAVICNVEHHV 428
           V+FRHPFRYKKQNELFVAAEG+YTGQF+YCGKKANLVVGNVLP+RSIPEGAV+CNVEHHV
Sbjct: 61  VSFRHPFRYKKQNELFVAAEGMYTGQFVYCGKKANLVVGNVLPVRSIPEGAVVCNVEHHV 120

Query: 429 GDRGVFARASGDYAIVISHNPDNDTSRIKLPSGAKKIVPSDCRAMIGQVAGGGRTEKPLL 608
           GDRGVFAR SGDYAIVISHNPDNDTSRIKLPSGAKKIVPS CRAM+GQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARCSGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMVGQVAGGGRTEKPLL 180

Query: 609 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 788
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 789 KRTGRLRGQ 815
           +RTGRLRGQ
Sbjct: 241 RRTGRLRGQ 249


>ref|XP_003537629.1| PREDICTED: 60S ribosomal protein L8-3-like [Glycine max]
          Length = 261

 Score =  504 bits (1297), Expect = e-140
 Identities = 241/249 (96%), Positives = 245/249 (98%)
 Frame = +3

Query: 69  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDVIHDPGRGAPLAK 248
           MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTD+IHDPGRGAPLAK
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDIIHDPGRGAPLAK 60

Query: 249 VTFRHPFRYKKQNELFVAAEGIYTGQFIYCGKKANLVVGNVLPLRSIPEGAVICNVEHHV 428
           V FRHPFRYKKQ ELFVAAEG+YTGQFIYCGKKA LVVGNVLPLRSIPEGAVICNVEHHV
Sbjct: 61  VAFRHPFRYKKQMELFVAAEGLYTGQFIYCGKKATLVVGNVLPLRSIPEGAVICNVEHHV 120

Query: 429 GDRGVFARASGDYAIVISHNPDNDTSRIKLPSGAKKIVPSDCRAMIGQVAGGGRTEKPLL 608
           GDRGVFARASGDYAIVISHNPDNDTSRIKLPSG+KKIVPS CRAMIGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARASGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 609 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 788
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 789 KRTGRLRGQ 815
           +RTGRLRGQ
Sbjct: 241 RRTGRLRGQ 249


Top