BLASTX nr result

ID: Glycyrrhiza24_contig00000324 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000324
         (1063 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003537629.1| PREDICTED: 60S ribosomal protein L8-3-like [...   507   e-141
ref|XP_003547944.1| PREDICTED: 60S ribosomal protein L8-3-like [...   506   e-141
gb|ACU19917.1| unknown [Glycine max]                                  506   e-141
ref|XP_003623912.1| 60S ribosomal protein L2 [Medicago truncatul...   504   e-140
ref|XP_003517183.1| PREDICTED: 60S ribosomal protein L8-3 [Glyci...   504   e-140

>ref|XP_003537629.1| PREDICTED: 60S ribosomal protein L8-3-like [Glycine max]
          Length = 261

 Score =  507 bits (1305), Expect = e-141
 Identities = 243/249 (97%), Positives = 246/249 (98%)
 Frame = +3

Query: 84  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDIIHDPGRGAPLAK 263
           MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDIIHDPGRGAPLAK
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDIIHDPGRGAPLAK 60

Query: 264 VTFRHPFRYKKQSELFVAAEGIYTGQFIYCGKKATLVVGNVLPLRSIPEGAVICNVEHHV 443
           V FRHPFRYKKQ ELFVAAEG+YTGQFIYCGKKATLVVGNVLPLRSIPEGAVICNVEHHV
Sbjct: 61  VAFRHPFRYKKQMELFVAAEGLYTGQFIYCGKKATLVVGNVLPLRSIPEGAVICNVEHHV 120

Query: 444 GDRGVFARASGDYAIVISHNPDNDTSRIKLPSGAKKIVPSACRAMIGQVAGGGRTEKPLL 623
           GDRGVFARASGDYAIVISHNPDNDTSRIKLPSG+KKIVPS CRAMIGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARASGDYAIVISHNPDNDTSRIKLPSGSKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 624 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 803
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 804 KRTGRLRGQ 830
           +RTGRLRGQ
Sbjct: 241 RRTGRLRGQ 249


>ref|XP_003547944.1| PREDICTED: 60S ribosomal protein L8-3-like [Glycine max]
          Length = 260

 Score =  506 bits (1303), Expect = e-141
 Identities = 241/249 (96%), Positives = 247/249 (99%)
 Frame = +3

Query: 84  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDIIHDPGRGAPLAK 263
           MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTD+IHDPGRGAPLAK
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDVIHDPGRGAPLAK 60

Query: 264 VTFRHPFRYKKQSELFVAAEGIYTGQFIYCGKKATLVVGNVLPLRSIPEGAVICNVEHHV 443
           V FRHPFRYKKQ+ELF+AAEG+YTGQFIYCGKKATLVVGNVLPLRSIPEGAVICNVEHHV
Sbjct: 61  VAFRHPFRYKKQNELFIAAEGLYTGQFIYCGKKATLVVGNVLPLRSIPEGAVICNVEHHV 120

Query: 444 GDRGVFARASGDYAIVISHNPDNDTSRIKLPSGAKKIVPSACRAMIGQVAGGGRTEKPLL 623
           GDRGVFARASGDYAIVISHNPDNDTSRIKLPSG+KKIVPS CRAMIGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARASGDYAIVISHNPDNDTSRIKLPSGSKKIVPSDCRAMIGQVAGGGRTEKPLL 180

Query: 624 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 803
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 804 KRTGRLRGQ 830
           +RTGRLRGQ
Sbjct: 241 RRTGRLRGQ 249


>gb|ACU19917.1| unknown [Glycine max]
          Length = 260

 Score =  506 bits (1303), Expect = e-141
 Identities = 241/249 (96%), Positives = 247/249 (99%)
 Frame = +3

Query: 84  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDIIHDPGRGAPLAK 263
           MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTD+IHDPGRGAPLAK
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDVIHDPGRGAPLAK 60

Query: 264 VTFRHPFRYKKQSELFVAAEGIYTGQFIYCGKKATLVVGNVLPLRSIPEGAVICNVEHHV 443
           V FRHPFRYKKQ+ELF+AAEG+YTGQFIYCGKKATLVVGNVLPLRSIPEGAVICNVEHHV
Sbjct: 61  VAFRHPFRYKKQNELFIAAEGLYTGQFIYCGKKATLVVGNVLPLRSIPEGAVICNVEHHV 120

Query: 444 GDRGVFARASGDYAIVISHNPDNDTSRIKLPSGAKKIVPSACRAMIGQVAGGGRTEKPLL 623
           GDRGVFARASGDYAIVISHNPDNDTSRIKLPSG+KKIVPS CRAMIGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARASGDYAIVISHNPDNDTSRIKLPSGSKKIVPSDCRAMIGQVAGGGRTEKPLL 180

Query: 624 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 803
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 804 KRTGRLRGQ 830
           +RTGRLRGQ
Sbjct: 241 RRTGRLRGQ 249


>ref|XP_003623912.1| 60S ribosomal protein L2 [Medicago truncatula]
           gi|355498927|gb|AES80130.1| 60S ribosomal protein L2
           [Medicago truncatula] gi|388498064|gb|AFK37098.1|
           unknown [Medicago truncatula]
          Length = 259

 Score =  504 bits (1298), Expect = e-140
 Identities = 242/249 (97%), Positives = 246/249 (98%)
 Frame = +3

Query: 84  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDIIHDPGRGAPLAK 263
           MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTD+IHDPGRGAPLAK
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDVIHDPGRGAPLAK 60

Query: 264 VTFRHPFRYKKQSELFVAAEGIYTGQFIYCGKKATLVVGNVLPLRSIPEGAVICNVEHHV 443
           VTFRHPFRY+KQ ELFVAAEG+YTGQFIYCGKKATLVVGNVLPLRSIPEGAVICNVE HV
Sbjct: 61  VTFRHPFRYQKQKELFVAAEGLYTGQFIYCGKKATLVVGNVLPLRSIPEGAVICNVEGHV 120

Query: 444 GDRGVFARASGDYAIVISHNPDNDTSRIKLPSGAKKIVPSACRAMIGQVAGGGRTEKPLL 623
           GDRGVFARASGDYAIVISHNPDNDTSRIKLPSGAKKIVPS CRAMIGQVAGGGRTEKP+L
Sbjct: 121 GDRGVFARASGDYAIVISHNPDNDTSRIKLPSGAKKIVPSDCRAMIGQVAGGGRTEKPML 180

Query: 624 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 803
           KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 804 KRTGRLRGQ 830
           KRTGRLRGQ
Sbjct: 241 KRTGRLRGQ 249


>ref|XP_003517183.1| PREDICTED: 60S ribosomal protein L8-3 [Glycine max]
          Length = 261

 Score =  504 bits (1297), Expect = e-140
 Identities = 241/249 (96%), Positives = 246/249 (98%)
 Frame = +3

Query: 84  MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDIIHDPGRGAPLAK 263
           MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDIIHDPGRGAPLAK
Sbjct: 1   MGRVIRAQRKGAGSVFKSHTHHRKGPARFRSLDFGERNGYLKGVVTDIIHDPGRGAPLAK 60

Query: 264 VTFRHPFRYKKQSELFVAAEGIYTGQFIYCGKKATLVVGNVLPLRSIPEGAVICNVEHHV 443
           V FRHPFRYKKQ+ELFVAAEG+YTGQF+YCGKKATLVVGNVLP+RSIPEGAVICNVEHHV
Sbjct: 61  VAFRHPFRYKKQTELFVAAEGLYTGQFVYCGKKATLVVGNVLPIRSIPEGAVICNVEHHV 120

Query: 444 GDRGVFARASGDYAIVISHNPDNDTSRIKLPSGAKKIVPSACRAMIGQVAGGGRTEKPLL 623
           GDRGVFARASGDYAIVISHNPDNDTSRIKLPSGAKKIVPS CRAMIGQVAGGGRTEKPLL
Sbjct: 121 GDRGVFARASGDYAIVISHNPDNDTSRIKLPSGAKKIVPSGCRAMIGQVAGGGRTEKPLL 180

Query: 624 KAGNAYHKFRVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 803
           KAGNAYHKFRVKRN WPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA
Sbjct: 181 KAGNAYHKFRVKRNSWPKVRGVAMNPVEHPHGGGNHQHIGHASTVRRDAPPGQKVGLIAA 240

Query: 804 KRTGRLRGQ 830
           +RTGRLRGQ
Sbjct: 241 RRTGRLRGQ 249


Top