BLASTX nr result

ID: Glycyrrhiza24_contig00000318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000318
         (953 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003525227.1| PREDICTED: 40S ribosomal protein S2-4-like [...   292   1e-86
ref|XP_003630949.1| 40S ribosomal protein S2 [Medicago truncatul...   291   1e-85
ref|XP_003538262.1| PREDICTED: 40S ribosomal protein S2-4-like [...   291   1e-85
ref|XP_003538244.1| PREDICTED: 40S ribosomal protein S2-4-like [...   291   1e-85
ref|XP_003518614.1| PREDICTED: 40S ribosomal protein S2-4-like [...   291   1e-85

>ref|XP_003525227.1| PREDICTED: 40S ribosomal protein S2-4-like [Glycine max]
          Length = 272

 Score =  292 bits (748), Expect(2) = 1e-86
 Identities = 148/172 (86%), Positives = 151/172 (87%)
 Frame = +2

Query: 2   PVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYW 181
           PVQKQTRAGQRTRFKAFVVVGD NGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYW
Sbjct: 93  PVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYW 152

Query: 182 GNKIGKPHTVPCKVTGKCGSVXXXXXXXXXXXXXXXXXXXXVRMVPAPRGSGIVAARVPK 361
           GNKIGKPHTVPCKVTGKCGSV                    VRMVPAPRGSGIVAARVPK
Sbjct: 153 GNKIGKPHTVPCKVTGKCGSV-------------------TVRMVPAPRGSGIVAARVPK 193

Query: 362 KVLQFAGIDDVFTSSRGSTKTLGNFVKATFECLLKTYGFLTPDFWRETRFSK 517
           KVLQFAGIDDVFTSSRGSTKTLGNFVKATF+CLLKTYGFLTP+FW+ETRFSK
Sbjct: 194 KVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLLKTYGFLTPEFWKETRFSK 245



 Score = 54.7 bits (130), Expect(2) = 1e-86
 Identities = 26/27 (96%), Positives = 27/27 (100%)
 Frame = +1

Query: 571 SPFQEFTDLLAKPTGKALILEEERVEA 651
           SPFQE+TDLLAKPTGKALILEEERVEA
Sbjct: 246 SPFQEYTDLLAKPTGKALILEEERVEA 272


>ref|XP_003630949.1| 40S ribosomal protein S2 [Medicago truncatula]
           gi|355524971|gb|AET05425.1| 40S ribosomal protein S2
           [Medicago truncatula]
          Length = 279

 Score =  291 bits (746), Expect(2) = 1e-85
 Identities = 147/172 (85%), Positives = 151/172 (87%)
 Frame = +2

Query: 2   PVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYW 181
           PVQKQTRAGQRTRFKAFVVVGD NGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYW
Sbjct: 100 PVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYW 159

Query: 182 GNKIGKPHTVPCKVTGKCGSVXXXXXXXXXXXXXXXXXXXXVRMVPAPRGSGIVAARVPK 361
           GNKIGKPHTVPCKVTGKCGSV                    VRMVPAPRGSGIVAARVPK
Sbjct: 160 GNKIGKPHTVPCKVTGKCGSV-------------------TVRMVPAPRGSGIVAARVPK 200

Query: 362 KVLQFAGIDDVFTSSRGSTKTLGNFVKATFECLLKTYGFLTPDFWRETRFSK 517
           KVLQFAGIDDVFTSSRGSTKTLGNFVKATF+CL+KTYGFLTP+FW+ETRFSK
Sbjct: 201 KVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLMKTYGFLTPEFWKETRFSK 252



 Score = 52.4 bits (124), Expect(2) = 1e-85
 Identities = 25/27 (92%), Positives = 26/27 (96%)
 Frame = +1

Query: 571 SPFQEFTDLLAKPTGKALILEEERVEA 651
           SPFQE+TDLLAKPT KALILEEERVEA
Sbjct: 253 SPFQEYTDLLAKPTAKALILEEERVEA 279


>ref|XP_003538262.1| PREDICTED: 40S ribosomal protein S2-4-like [Glycine max]
          Length = 275

 Score =  291 bits (746), Expect(2) = 1e-85
 Identities = 147/172 (85%), Positives = 151/172 (87%)
 Frame = +2

Query: 2   PVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYW 181
           PVQKQTRAGQRTRFKAFVVVGD NGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYW
Sbjct: 96  PVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYW 155

Query: 182 GNKIGKPHTVPCKVTGKCGSVXXXXXXXXXXXXXXXXXXXXVRMVPAPRGSGIVAARVPK 361
           GNKIGKPHTVPCKVTGKCGSV                    VRMVPAPRGSGIVAARVPK
Sbjct: 156 GNKIGKPHTVPCKVTGKCGSV-------------------TVRMVPAPRGSGIVAARVPK 196

Query: 362 KVLQFAGIDDVFTSSRGSTKTLGNFVKATFECLLKTYGFLTPDFWRETRFSK 517
           KVLQFAGIDDVFTSSRGSTKTLGNFVKATF+CL+KTYGFLTP+FW+ETRFSK
Sbjct: 197 KVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLMKTYGFLTPEFWKETRFSK 248



 Score = 52.0 bits (123), Expect(2) = 1e-85
 Identities = 24/27 (88%), Positives = 26/27 (96%)
 Frame = +1

Query: 571 SPFQEFTDLLAKPTGKALILEEERVEA 651
           SPFQE+TDLLAKPTGK LILEEERV+A
Sbjct: 249 SPFQEYTDLLAKPTGKTLILEEERVDA 275


>ref|XP_003538244.1| PREDICTED: 40S ribosomal protein S2-4-like [Glycine max]
          Length = 275

 Score =  291 bits (746), Expect(2) = 1e-85
 Identities = 147/172 (85%), Positives = 151/172 (87%)
 Frame = +2

Query: 2   PVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYW 181
           PVQKQTRAGQRTRFKAFVVVGD NGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYW
Sbjct: 96  PVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYW 155

Query: 182 GNKIGKPHTVPCKVTGKCGSVXXXXXXXXXXXXXXXXXXXXVRMVPAPRGSGIVAARVPK 361
           GNKIGKPHTVPCKVTGKCGSV                    VRMVPAPRGSGIVAARVPK
Sbjct: 156 GNKIGKPHTVPCKVTGKCGSV-------------------TVRMVPAPRGSGIVAARVPK 196

Query: 362 KVLQFAGIDDVFTSSRGSTKTLGNFVKATFECLLKTYGFLTPDFWRETRFSK 517
           KVLQFAGIDDVFTSSRGSTKTLGNFVKATF+CL+KTYGFLTP+FW+ETRFSK
Sbjct: 197 KVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLMKTYGFLTPEFWKETRFSK 248



 Score = 52.0 bits (123), Expect(2) = 1e-85
 Identities = 24/27 (88%), Positives = 26/27 (96%)
 Frame = +1

Query: 571 SPFQEFTDLLAKPTGKALILEEERVEA 651
           SPFQE+TDLLAKPTGK LILEEERV+A
Sbjct: 249 SPFQEYTDLLAKPTGKTLILEEERVDA 275


>ref|XP_003518614.1| PREDICTED: 40S ribosomal protein S2-4-like [Glycine max]
          Length = 275

 Score =  291 bits (746), Expect(2) = 1e-85
 Identities = 147/172 (85%), Positives = 151/172 (87%)
 Frame = +2

Query: 2   PVQKQTRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYW 181
           PVQKQTRAGQRTRFKAFVVVGD NGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYW
Sbjct: 96  PVQKQTRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYW 155

Query: 182 GNKIGKPHTVPCKVTGKCGSVXXXXXXXXXXXXXXXXXXXXVRMVPAPRGSGIVAARVPK 361
           GNKIGKPHTVPCKVTGKCGSV                    VRMVPAPRGSGIVAARVPK
Sbjct: 156 GNKIGKPHTVPCKVTGKCGSV-------------------TVRMVPAPRGSGIVAARVPK 196

Query: 362 KVLQFAGIDDVFTSSRGSTKTLGNFVKATFECLLKTYGFLTPDFWRETRFSK 517
           KVLQFAGIDDVFTSSRGSTKTLGNFVKATF+CL+KTYGFLTP+FW+ETRFSK
Sbjct: 197 KVLQFAGIDDVFTSSRGSTKTLGNFVKATFDCLMKTYGFLTPEFWKETRFSK 248



 Score = 52.0 bits (123), Expect(2) = 1e-85
 Identities = 24/27 (88%), Positives = 26/27 (96%)
 Frame = +1

Query: 571 SPFQEFTDLLAKPTGKALILEEERVEA 651
           SPFQE+TDLLAKPTGK LILEEERV+A
Sbjct: 249 SPFQEYTDLLAKPTGKTLILEEERVDA 275


Top