BLASTX nr result

ID: Glycyrrhiza24_contig00000308 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000308
         (685 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597929.1| DNA (cytosine-5)-methyltransferase 3B [Medic...   213   3e-53
ref|XP_002326168.1| predicted protein [Populus trichocarpa] gi|2...    72   8e-11
emb|CAN75603.1| hypothetical protein VITISV_016382 [Vitis vinifera]    67   3e-09
ref|XP_002315275.1| predicted protein [Populus trichocarpa] gi|2...    64   4e-08
ref|XP_003633464.1| PREDICTED: uncharacterized protein LOC100852...    63   5e-08

>ref|XP_003597929.1| DNA (cytosine-5)-methyltransferase 3B [Medicago truncatula]
            gi|355486977|gb|AES68180.1| DNA
            (cytosine-5)-methyltransferase 3B [Medicago truncatula]
          Length = 854

 Score =  213 bits (542), Expect = 3e-53
 Identities = 144/299 (48%), Positives = 164/299 (54%), Gaps = 74/299 (24%)
 Frame = +2

Query: 11   FPYTSKHISPDRKQPGKKRKLLSDLMSEKNLCIPNGERTSERKA---------------- 142
            F   S+HIS + KQ GKK+KLLSDLMSEKN     GE   E+KA                
Sbjct: 463  FSQKSQHISQNMKQTGKKKKLLSDLMSEKNSWNLKGECMPEKKADDNSISRCARKQKAAH 522

Query: 143  --------------------GRKRKASYTTSDDDYF-----------HNSKMRKLT---- 217
                                G KRKA+Y TSDDD+               + RKL     
Sbjct: 523  DTNEYFHHSQIADDKSTSLCGTKRKAAYDTSDDDFHSYQISGNNSTSRRGRKRKLAYNAF 582

Query: 218  -------------QLQHVSIDEMWSQLCLAAKDPEGENCFSDMIHFFAEFRKSVVPGDSA 358
                         QLQ+VS+DEM SQLCLAAKDP GE+  SDMI+FF+EF K     DS 
Sbjct: 583  DDCSNNYQTGNHIQLQNVSVDEMQSQLCLAAKDPAGESFSSDMIYFFSEFEKFTGRNDS- 641

Query: 359  ASLEQEMSLEQSHGGDTG-VNSIEAVT----SMPTAKEPCNDPYWTDRVIQSISEEQSLL 523
              LE  +SLEQ HGG+TG V SIEA      S PT  E CND YWTDR+IQSISEE++LL
Sbjct: 642  VFLEHGLSLEQEHGGETGVVTSIEAAATSSMSTPTPMELCNDSYWTDRIIQSISEEETLL 701

Query: 524  KNQNRREEFLPEIPAAEISTNLGLMQQETDRNLVSEPSE-----EGFCPTSLTLKFTNL 685
            KNQN R+E +   PAAEIS  LGLM QET+ NL SEPS          PTSLTLKFTNL
Sbjct: 702  KNQNERDELM---PAAEISPGLGLMHQETNGNLGSEPSNHVEHVNDSSPTSLTLKFTNL 757


>ref|XP_002326168.1| predicted protein [Populus trichocarpa] gi|222833361|gb|EEE71838.1|
            predicted protein [Populus trichocarpa]
          Length = 918

 Score = 72.4 bits (176), Expect = 8e-11
 Identities = 66/208 (31%), Positives = 89/208 (42%), Gaps = 31/208 (14%)
 Frame = +2

Query: 155  KASYTTSDDDYFHNSKMRKLTQ-LQHVSIDEMWSQLCLAAKDP-EGENCFSDMIHFFAEF 328
            K+  TTS  +        K T      S DE+ SQLCL A+DP +G N    ++ FF +F
Sbjct: 609  KSVNTTSRKNAKKTKSQEKSTSGKSKASPDELVSQLCLVARDPMKGCNFLKSVVSFFVKF 668

Query: 329  RKSVVPGDSAASLEQEMSLEQSHGGDTGVNSIEAVTSMPTAKEPCNDPYWTDRVIQSISE 508
            R SV      +    + SLE   GGD G  S   V +  T  E   D +WTD++ QS  +
Sbjct: 669  RNSVCINPLNSQQHVQSSLEHISGGDVGELST-IVETQTTDSEHMKDSHWTDKMTQSNPK 727

Query: 509  EQSLLKNQNRREEFLPEIP------------AAEISTNL--------GLM---------Q 601
             QS  +N+N   E   E P            A ++  NL        G++          
Sbjct: 728  GQSSHENKNEAREIPEETPTKDGIPTFRKQSAVQLEPNLECELHIAGGILDLGAGKPIDH 787

Query: 602  QETDRNLVSEPSEEGFCPTSLTLKFTNL 685
             E  RN  S P     CPT+L L FT+L
Sbjct: 788  LEGKRNDDSSP-----CPTALILNFTDL 810


>emb|CAN75603.1| hypothetical protein VITISV_016382 [Vitis vinifera]
          Length = 1887

 Score = 67.4 bits (163), Expect = 3e-09
 Identities = 48/152 (31%), Positives = 76/152 (50%), Gaps = 2/152 (1%)
 Frame = +2

Query: 65   RKLLSDLMSEKNLCIPNGERTSERKAGRKRKASYTTSDDDYFH-NSKMRKLTQLQHVSID 241
            R+  S L    ++   +GER  +   G   K     SD          R +  +++ S+D
Sbjct: 1575 RRAASQLTGSPSILKCSGERPQKVVDGSIGKLGGPGSDVSLMSPEDPQRMIIPMEYPSLD 1634

Query: 242  EMWSQLCLAAKDP-EGENCFSDMIHFFAEFRKSVVPGDSAASLEQEMSLEQSHGGDTGVN 418
            EM SQL LAA+DP +G +    ++ FF+EFR S++ G  +    + +++++  G     +
Sbjct: 1635 EMLSQLRLAARDPMKGYSFLDTIVSFFSEFRNSILLGRYSG--RESLTMDKVAGNRRKKS 1692

Query: 419  SIEAVTSMPTAKEPCNDPYWTDRVIQSISEEQ 514
            S    +      E  ND YWTDRVIQ+ SEEQ
Sbjct: 1693 SQPIGSPEEFEFEDMNDTYWTDRVIQNTSEEQ 1724


>ref|XP_002315275.1| predicted protein [Populus trichocarpa] gi|222864315|gb|EEF01446.1|
            predicted protein [Populus trichocarpa]
          Length = 1405

 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 49/152 (32%), Positives = 74/152 (48%), Gaps = 1/152 (0%)
 Frame = +2

Query: 110  PNGERTSERKAGRKRKASYTTSDDDYFHNSKMRKLTQLQHVSIDEMWSQLCLAAKDP-EG 286
            P  + +S+   G    AS+  S+D        R +   ++ S+D++ SQL L A+DP +G
Sbjct: 1133 PKVDGSSDGLVGDGSDASFLHSEDAEIK----RIIVPTEYSSLDDLLSQLHLTAQDPLKG 1188

Query: 287  ENCFSDMIHFFAEFRKSVVPGDSAASLEQEMSLEQSHGGDTGVNSIEAVTSMPTAKEPCN 466
                + +I FF++FR SVV  D    +  +     S GG       E +          N
Sbjct: 1189 YGFLNIIISFFSDFRNSVVM-DQHDKVSGKRKTSHSSGGFPETFEFEDM----------N 1237

Query: 467  DPYWTDRVIQSISEEQSLLKNQNRREEFLPEI 562
            D YWTDRVIQ+ SEEQ   K++ R   F+P +
Sbjct: 1238 DTYWTDRVIQNGSEEQPPRKSRKRDNLFVPVV 1269


>ref|XP_003633464.1| PREDICTED: uncharacterized protein LOC100852955 [Vitis vinifera]
          Length = 264

 Score = 63.2 bits (152), Expect = 5e-08
 Identities = 37/99 (37%), Positives = 59/99 (59%), Gaps = 1/99 (1%)
 Frame = +2

Query: 221 LQHVSIDEMWSQLCLAAKDP-EGENCFSDMIHFFAEFRKSVVPGDSAASLEQEMSLEQSH 397
           +++ S+DEM SQL LAA+DP +G +    ++ FF+EFR S++ G  +    + +++++  
Sbjct: 5   MEYPSLDEMLSQLRLAARDPMKGYSFLDTIVSFFSEFRNSILLGRYSG--RESLTMDKVA 62

Query: 398 GGDTGVNSIEAVTSMPTAKEPCNDPYWTDRVIQSISEEQ 514
           G     +S    +      E  ND YWTDRVIQ+ SEEQ
Sbjct: 63  GNRRKKSSQPIGSPEEFEFEDMNDTYWTDRVIQNTSEEQ 101


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