BLASTX nr result

ID: Glycyrrhiza24_contig00000303 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000303
         (936 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003543608.1| PREDICTED: charged multivesicular body prote...   233   6e-59
ref|XP_002281282.1| PREDICTED: charged multivesicular body prote...   231   1e-58
ref|XP_002303220.1| predicted protein [Populus trichocarpa] gi|2...   229   7e-58
ref|XP_004146833.1| PREDICTED: charged multivesicular body prote...   229   9e-58
gb|AFK37810.1| unknown [Medicago truncatula]                          228   2e-57

>ref|XP_003543608.1| PREDICTED: charged multivesicular body protein 1-like isoform 1
           [Glycine max] gi|356550468|ref|XP_003543609.1|
           PREDICTED: charged multivesicular body protein 1-like
           isoform 2 [Glycine max] gi|356550470|ref|XP_003543610.1|
           PREDICTED: charged multivesicular body protein 1-like
           isoform 3 [Glycine max] gi|356556672|ref|XP_003546647.1|
           PREDICTED: charged multivesicular body protein 1-like
           [Glycine max]
          Length = 203

 Score =  233 bits (593), Expect = 6e-59
 Identities = 136/176 (77%), Positives = 137/176 (77%)
 Frame = -2

Query: 935 ARIYAENAIRKRTEQMNYLRLSSRLDAVVARLDTQAKMTTISKSMGNIVKSLESSLATGN 756
           ARIYAENAIRKRTEQMNYLRL+SRLDAVVARLDTQAKMTTISKSMGNIVKSLESSLATGN
Sbjct: 51  ARIYAENAIRKRTEQMNYLRLASRLDAVVARLDTQAKMTTISKSMGNIVKSLESSLATGN 110

Query: 755 LQKMSETMDQFEKQFVNMEVQAEFMESAMAGSTSLSTPEGEVNSLMQQVAXXXXXXXXXX 576
           LQKMSETMD FEKQFVNMEVQAEFMESAMAGSTSLSTPEGEVNSLMQQVA          
Sbjct: 111 LQKMSETMDSFEKQFVNMEVQAEFMESAMAGSTSLSTPEGEVNSLMQQVA---------- 160

Query: 575 XXXXXXXXXXXXXYGLEVSVGLPQPAAHXXXXXXXXXXXXXXXDLSRRLAELKARG 408
                        YGLEVSVGLPQPAAH               DLSRRLAELKARG
Sbjct: 161 -----------DDYGLEVSVGLPQPAAH--AVPAKEADKVDEDDLSRRLAELKARG 203


>ref|XP_002281282.1| PREDICTED: charged multivesicular body protein 1 [Vitis vinifera]
           gi|147855645|emb|CAN79153.1| hypothetical protein
           VITISV_016190 [Vitis vinifera]
          Length = 202

 Score =  231 bits (590), Expect = 1e-58
 Identities = 135/176 (76%), Positives = 138/176 (78%)
 Frame = -2

Query: 935 ARIYAENAIRKRTEQMNYLRLSSRLDAVVARLDTQAKMTTISKSMGNIVKSLESSLATGN 756
           ARIYAENAIRKRTEQMNYLRLSSRLDAVVARLDTQAKMTTISKSMG+IVKSLES+LATGN
Sbjct: 51  ARIYAENAIRKRTEQMNYLRLSSRLDAVVARLDTQAKMTTISKSMGSIVKSLESTLATGN 110

Query: 755 LQKMSETMDQFEKQFVNMEVQAEFMESAMAGSTSLSTPEGEVNSLMQQVAXXXXXXXXXX 576
           LQKMSETMDQFEKQFVNMEVQAEFMES+MAGSTSLSTPEGEVNSLMQQVA          
Sbjct: 111 LQKMSETMDQFEKQFVNMEVQAEFMESSMAGSTSLSTPEGEVNSLMQQVA---------- 160

Query: 575 XXXXXXXXXXXXXYGLEVSVGLPQPAAHXXXXXXXXXXXXXXXDLSRRLAELKARG 408
                        YGLEVSVGLPQPAAH               DLSRRLAELKARG
Sbjct: 161 -----------DDYGLEVSVGLPQPAAH---AVPAKAEKVDEDDLSRRLAELKARG 202


>ref|XP_002303220.1| predicted protein [Populus trichocarpa] gi|222840652|gb|EEE78199.1|
           predicted protein [Populus trichocarpa]
          Length = 203

 Score =  229 bits (584), Expect = 7e-58
 Identities = 133/176 (75%), Positives = 138/176 (78%)
 Frame = -2

Query: 935 ARIYAENAIRKRTEQMNYLRLSSRLDAVVARLDTQAKMTTISKSMGNIVKSLESSLATGN 756
           ARIYAENAIRKRTEQMNYLRLSSRLDAVVARLDTQAKMTTI+KSMG+IVKSLES+LATGN
Sbjct: 51  ARIYAENAIRKRTEQMNYLRLSSRLDAVVARLDTQAKMTTINKSMGSIVKSLESTLATGN 110

Query: 755 LQKMSETMDQFEKQFVNMEVQAEFMESAMAGSTSLSTPEGEVNSLMQQVAXXXXXXXXXX 576
           LQKMSETMDQFEKQFVNMEVQAEFMES+MAGSTSLSTPEGEVNSLMQQVA          
Sbjct: 111 LQKMSETMDQFEKQFVNMEVQAEFMESSMAGSTSLSTPEGEVNSLMQQVA---------- 160

Query: 575 XXXXXXXXXXXXXYGLEVSVGLPQPAAHXXXXXXXXXXXXXXXDLSRRLAELKARG 408
                        YGLEVSVGLPQPAAH               DLSRRLAELKA+G
Sbjct: 161 -----------DDYGLEVSVGLPQPAAH--AVATSSQEKVGEDDLSRRLAELKAKG 203


>ref|XP_004146833.1| PREDICTED: charged multivesicular body protein 1-like [Cucumis
           sativus] gi|449476685|ref|XP_004154806.1| PREDICTED:
           charged multivesicular body protein 1-like [Cucumis
           sativus]
          Length = 203

 Score =  229 bits (583), Expect = 9e-58
 Identities = 133/176 (75%), Positives = 138/176 (78%)
 Frame = -2

Query: 935 ARIYAENAIRKRTEQMNYLRLSSRLDAVVARLDTQAKMTTISKSMGNIVKSLESSLATGN 756
           ARIYAENAIRKRTEQMNYLRLSSRLDAVVARLDTQAKM+TI+KSMG+IVKSLES+LATGN
Sbjct: 51  ARIYAENAIRKRTEQMNYLRLSSRLDAVVARLDTQAKMSTINKSMGSIVKSLESTLATGN 110

Query: 755 LQKMSETMDQFEKQFVNMEVQAEFMESAMAGSTSLSTPEGEVNSLMQQVAXXXXXXXXXX 576
           LQKMSETMDQFEKQFVNMEVQAEFME+AMAGSTSLSTPEGEVNSLMQQVA          
Sbjct: 111 LQKMSETMDQFEKQFVNMEVQAEFMENAMAGSTSLSTPEGEVNSLMQQVA---------- 160

Query: 575 XXXXXXXXXXXXXYGLEVSVGLPQPAAHXXXXXXXXXXXXXXXDLSRRLAELKARG 408
                        YGLEVSVGLPQPAAH               DLSRRLAELKARG
Sbjct: 161 -----------DDYGLEVSVGLPQPAAH--AVPARETEKIDEDDLSRRLAELKARG 203


>gb|AFK37810.1| unknown [Medicago truncatula]
          Length = 158

 Score =  228 bits (581), Expect = 2e-57
 Identities = 133/176 (75%), Positives = 134/176 (76%)
 Frame = -2

Query: 935 ARIYAENAIRKRTEQMNYLRLSSRLDAVVARLDTQAKMTTISKSMGNIVKSLESSLATGN 756
           ARIYAENAIRKRTEQMNYLRLSSRLDAV ARLDTQAKM+TISKSMGNIVKSLESSLATGN
Sbjct: 4   ARIYAENAIRKRTEQMNYLRLSSRLDAVSARLDTQAKMSTISKSMGNIVKSLESSLATGN 63

Query: 755 LQKMSETMDQFEKQFVNMEVQAEFMESAMAGSTSLSTPEGEVNSLMQQVAXXXXXXXXXX 576
           LQKMSETMDQFEKQFVNMEVQAEFMESAMAGSTSLSTPEGEVNSLMQQVA          
Sbjct: 64  LQKMSETMDQFEKQFVNMEVQAEFMESAMAGSTSLSTPEGEVNSLMQQVA---------- 113

Query: 575 XXXXXXXXXXXXXYGLEVSVGLPQPAAHXXXXXXXXXXXXXXXDLSRRLAELKARG 408
                        YGLEVSV LP  AAH               DLSRRLAELKARG
Sbjct: 114 -----------DDYGLEVSVNLPVAAAHAVPVKEKDAEKVDEDDLSRRLAELKARG 158


Top