BLASTX nr result

ID: Glycyrrhiza24_contig00000277 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000277
         (1665 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542514.1| PREDICTED: E3 ubiquitin-protein ligase MGRN1...   399   e-108
ref|XP_003537289.1| PREDICTED: E3 ubiquitin-protein ligase MGRN1...   395   e-107
ref|XP_003625622.1| RING finger protein [Medicago truncatula] gi...   343   8e-92
ref|XP_003554375.1| PREDICTED: E3 ubiquitin-protein ligase MGRN1...   342   2e-91
ref|XP_004137817.1| PREDICTED: probable E3 ubiquitin-protein lig...   325   3e-86

>ref|XP_003542514.1| PREDICTED: E3 ubiquitin-protein ligase MGRN1-like [Glycine max]
          Length = 349

 Score =  399 bits (1025), Expect = e-108
 Identities = 205/269 (76%), Positives = 218/269 (81%), Gaps = 6/269 (2%)
 Frame = +3

Query: 471  VHPP---VTPQPEIVGNRFVYPAAATXXXXXXXXXXXXXXXXXXXXXXXYDHHHRLAMDP 641
            +HPP   V P PE+  N+FVYP AAT                       YDHHHR A+DP
Sbjct: 25   IHPPPPQVMPPPEVTANQFVYPPAATPYHNYPGYYPAPTTMPAPLPAP-YDHHHRTAVDP 83

Query: 642  MWGRYXXXXXXXXX-YVEHQKAVTIKNDVNIKKETLRIEPDEENPGHFLVSFTFDATVSG 818
            MWGRY          YVEHQKAVTIKNDVNIKKETLRIEPD+ENPG FLVSFTFDATVSG
Sbjct: 84   MWGRYPVAAPPAPAPYVEHQKAVTIKNDVNIKKETLRIEPDDENPGRFLVSFTFDATVSG 143

Query: 819  SITILFFAKEGEGCVLTPMKENVLAPVTVNFQQGLGQKFRQPSGTGIDFSMFEESELLKV 998
            SITILFFAKEGEGC LTPMKENVL PVTVNFQQGLGQKF+QP+GTGIDFS FEESELLKV
Sbjct: 144  SITILFFAKEGEGCTLTPMKENVLPPVTVNFQQGLGQKFKQPAGTGIDFSTFEESELLKV 203

Query: 999  GDMDVYPVAVKADASSGEHD--GSNETPASGKTNSQITQAVFEKEKGEFRVKVVKQILWV 1172
            GDMDVYPVA+KADASS +HD   SNETP+SG +NSQITQAVFEKEKGEF+VKVVKQILWV
Sbjct: 204  GDMDVYPVAIKADASSSDHDESKSNETPSSGSSNSQITQAVFEKEKGEFQVKVVKQILWV 263

Query: 1173 NGMRYELQEIYGIGNSVESDLDGNDPGKE 1259
            NGMRYELQEIYGIGNSVESD+DGNDPGKE
Sbjct: 264  NGMRYELQEIYGIGNSVESDVDGNDPGKE 292


>ref|XP_003537289.1| PREDICTED: E3 ubiquitin-protein ligase MGRN1-like [Glycine max]
          Length = 349

 Score =  395 bits (1015), Expect = e-107
 Identities = 204/264 (77%), Positives = 214/264 (81%), Gaps = 3/264 (1%)
 Frame = +3

Query: 477  PPVTPQPEIVGNRFVYPAAATXXXXXXXXXXXXXXXXXXXXXXXYDHHHRLAMDPMWGRY 656
            PPV   PE+  NRFVYP AAT                       YDHHHR A+DPMW RY
Sbjct: 30   PPVMSPPEVTANRFVYPPAATPYHNYPGYYPPPTTMPAPLPAP-YDHHHRPAVDPMWVRY 88

Query: 657  XXXXXXXXX-YVEHQKAVTIKNDVNIKKETLRIEPDEENPGHFLVSFTFDATVSGSITIL 833
                      YVEHQKAVTIKNDVNIKKETLRIEPD+ENPG FLVSFTFDATVSGSITIL
Sbjct: 89   PPAAPPAPAPYVEHQKAVTIKNDVNIKKETLRIEPDDENPGCFLVSFTFDATVSGSITIL 148

Query: 834  FFAKEGEGCVLTPMKENVLAPVTVNFQQGLGQKFRQPSGTGIDFSMFEESELLKVGDMDV 1013
            FFAKEGEGC LTPMKENVL PVTVNFQQGLGQKF+QP+GTGIDFS FEESELLK GDMDV
Sbjct: 149  FFAKEGEGCTLTPMKENVLPPVTVNFQQGLGQKFKQPAGTGIDFSTFEESELLKAGDMDV 208

Query: 1014 YPVAVKADASSGEHD--GSNETPASGKTNSQITQAVFEKEKGEFRVKVVKQILWVNGMRY 1187
            YPVA+KADASSG+HD   SNETPASG +NSQITQAVFEKEKGEF+VKVVKQILWVNGMRY
Sbjct: 209  YPVAIKADASSGDHDESKSNETPASGSSNSQITQAVFEKEKGEFQVKVVKQILWVNGMRY 268

Query: 1188 ELQEIYGIGNSVESDLDGNDPGKE 1259
            ELQEIYGIGNSVESD+DGNDPGKE
Sbjct: 269  ELQEIYGIGNSVESDVDGNDPGKE 292


>ref|XP_003625622.1| RING finger protein [Medicago truncatula] gi|87240953|gb|ABD32811.1|
            Zinc finger, RING-type [Medicago truncatula]
            gi|355500637|gb|AES81840.1| RING finger protein [Medicago
            truncatula]
          Length = 352

 Score =  343 bits (880), Expect = 8e-92
 Identities = 184/270 (68%), Positives = 198/270 (73%), Gaps = 9/270 (3%)
 Frame = +3

Query: 477  PPVTPQPEIVGNRFVYPAAATXXXXXXXXXXXXXXXXXXXXXXXYDHHH-----RLAMDP 641
            PPVTPQPEI  ++FVYP AA                          HHH        MDP
Sbjct: 28   PPVTPQPEIAPHQFVYPGAAPYPNPPMHYPQYHYPGYYPPPIPMPHHHHPHPHPHPHMDP 87

Query: 642  MW-GRYXXXXXXXXX---YVEHQKAVTIKNDVNIKKETLRIEPDEENPGHFLVSFTFDAT 809
             W  RY            +VEHQKAVTI+NDVNIKKET+ I PDEENPG FLVSFTFDA 
Sbjct: 88   AWVSRYYPCGPVVNQPAPFVEHQKAVTIRNDVNIKKETIVISPDEENPGFFLVSFTFDAA 147

Query: 810  VSGSITILFFAKEGEGCVLTPMKENVLAPVTVNFQQGLGQKFRQPSGTGIDFSMFEESEL 989
            VSGSITI FFAKE EGC+LTP KE  LAPVTV FQQGLGQKFRQ +GTGI+FSMFEES+L
Sbjct: 148  VSGSITIFFFAKEDEGCILTPTKETHLAPVTVQFQQGLGQKFRQQAGTGINFSMFEESDL 207

Query: 990  LKVGDMDVYPVAVKADASSGEHDGSNETPASGKTNSQITQAVFEKEKGEFRVKVVKQILW 1169
            +KVGD+DVYP+AVKADASS  HDGSNET  S K NSQITQAVFEKEKGEFRVKVVKQIL 
Sbjct: 208  VKVGDVDVYPLAVKADASSDNHDGSNETETSSKPNSQITQAVFEKEKGEFRVKVVKQILS 267

Query: 1170 VNGMRYELQEIYGIGNSVESDLDGNDPGKE 1259
            VNGMRYELQEIYGIGNSVESD+D N+ GKE
Sbjct: 268  VNGMRYELQEIYGIGNSVESDVDDNEQGKE 297


>ref|XP_003554375.1| PREDICTED: E3 ubiquitin-protein ligase MGRN1-like [Glycine max]
          Length = 366

 Score =  342 bits (876), Expect = 2e-91
 Identities = 183/280 (65%), Positives = 201/280 (71%), Gaps = 19/280 (6%)
 Frame = +3

Query: 477  PPVTPQPEIVGNRFVYPAAATXXXXXXXXXXXXXXXXXXXXXXX---------YDHHHRL 629
            PPVTPQPEI  N FVY  AA+                                +  HH  
Sbjct: 32   PPVTPQPEIAANPFVYHGAASPYPNPPLHYPQYHYPGYYPSVPPPMPHHPHHHHHQHHHP 91

Query: 630  AMDPMW--GRYXXXXXXXXX--YVEHQKAVTIKNDVNIKKETLRIEPDEENPGHFLVSFT 797
             MDP W  GRY           +VEHQKAVTIKNDVNI+KETLR+EPDE+N GH LVSF+
Sbjct: 92   HMDPAWIQGRYPCGPMMPNPAPFVEHQKAVTIKNDVNIRKETLRLEPDEQNSGHLLVSFS 151

Query: 798  FDATVSGSITILFFAKEGEGCVLTPMKENVLAPVTVNFQQGLGQKFRQPSGTGIDFSMFE 977
            FDATVSGSI I FFAKEGEGC+LTPMKEN LAPVTV+F+QGLGQKFRQ +GTGIDFS+FE
Sbjct: 152  FDATVSGSIAIYFFAKEGEGCILTPMKENHLAPVTVHFEQGLGQKFRQAAGTGIDFSVFE 211

Query: 978  ESELLKVGDMDVYPVAVKADAS------SGEHDGSNETPASGKTNSQITQAVFEKEKGEF 1139
            ESELLKVGDM+VYP+AVKADAS       G +D S+ +P SG TNSQITQ VFEKEKGEF
Sbjct: 212  ESELLKVGDMNVYPLAVKADASVKADAPPGNYDESDRSPTSGNTNSQITQVVFEKEKGEF 271

Query: 1140 RVKVVKQILWVNGMRYELQEIYGIGNSVESDLDGNDPGKE 1259
            RVKV KQILWVNGMRYELQEIYGIGNS ESDLD ND GK+
Sbjct: 272  RVKVAKQILWVNGMRYELQEIYGIGNSTESDLDENDQGKD 311


>ref|XP_004137817.1| PREDICTED: probable E3 ubiquitin-protein ligase LOG2-like [Cucumis
            sativus] gi|449513666|ref|XP_004164388.1| PREDICTED:
            probable E3 ubiquitin-protein ligase LOG2-like [Cucumis
            sativus]
          Length = 368

 Score =  325 bits (832), Expect = 3e-86
 Identities = 173/285 (60%), Positives = 196/285 (68%), Gaps = 24/285 (8%)
 Frame = +3

Query: 477  PPVTPQPEIVGNRFVYPAAATXXXXXXXXXXXXXXXXXXXXXXX---------------- 608
            PP  PQPEI  NR+V+ AA                                         
Sbjct: 26   PPPPPQPEITSNRYVFAAATPYPTQYPNHPNHPPPYYQYPGYFPPPPGPPPSMPMPLPAP 85

Query: 609  YDHHHRLA---MDPM-W--GRYXXXXXXXXX--YVEHQKAVTIKNDVNIKKETLRIEPDE 764
            YDHHHR     MDP  W  GRY           YVEHQKAVTI+NDVN+KKETL++EPDE
Sbjct: 86   YDHHHRGGHPQMDPAHWVGGRYPYGPPMPPQTPYVEHQKAVTIRNDVNLKKETLKVEPDE 145

Query: 765  ENPGHFLVSFTFDATVSGSITILFFAKEGEGCVLTPMKENVLAPVTVNFQQGLGQKFRQP 944
            ENPG FLVSFTFDATV+GSITI FFAKEGE C LTP+KE++  P+TV+F+QGLGQKFRQP
Sbjct: 146  ENPGQFLVSFTFDATVAGSITIFFFAKEGEDCNLTPVKEDIFQPITVHFEQGLGQKFRQP 205

Query: 945  SGTGIDFSMFEESELLKVGDMDVYPVAVKADASSGEHDGSNETPASGKTNSQITQAVFEK 1124
            SGTGIDFS FEESE LKV D DVYP+ VKA+AS+    G + TP     NSQITQAVFEK
Sbjct: 206  SGTGIDFSKFEESEFLKVNDTDVYPLVVKAEASTDTQTGPDGTPVPDPMNSQITQAVFEK 265

Query: 1125 EKGEFRVKVVKQILWVNGMRYELQEIYGIGNSVESDLDGNDPGKE 1259
            +KGE++V+V+KQILWVNGMRYELQEIYGIGNSVE D+DGNDPGKE
Sbjct: 266  DKGEYQVRVLKQILWVNGMRYELQEIYGIGNSVEGDVDGNDPGKE 310


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