BLASTX nr result

ID: Glycyrrhiza24_contig00000253 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000253
         (1012 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001236332.1| uncharacterized protein LOC100305761 [Glycin...   272   8e-71
ref|XP_002284637.2| PREDICTED: tetratricopeptide repeat protein ...   243   4e-62
gb|AFK42221.1| unknown [Medicago truncatula]                          240   5e-61
ref|XP_002520288.1| conserved hypothetical protein [Ricinus comm...   238   2e-60
emb|CBI18954.3| unnamed protein product [Vitis vinifera]              236   9e-60

>ref|NP_001236332.1| uncharacterized protein LOC100305761 [Glycine max]
           gi|255626545|gb|ACU13617.1| unknown [Glycine max]
          Length = 192

 Score =  272 bits (696), Expect = 8e-71
 Identities = 146/212 (68%), Positives = 158/212 (74%), Gaps = 3/212 (1%)
 Frame = +2

Query: 92  MKVTWXXXXXXXLCLP---HLSDLPFEQHEQPNSDPNNNRDTEDSSDGVRGGDSNSEQSF 262
           MKVTW        CLP   H +DLPFE + Q +S    N D ED +              
Sbjct: 1   MKVTWKNKKKKR-CLPTLSHFTDLPFEHNHQQHS----NTDAEDGAH------------- 42

Query: 263 RHSDKEEARLLAKEFQAQGDNLATDGKYREALSKWEAALTLAPDIPVLHEQKAQVLLEIG 442
                 +A  LA EFQAQGD LA DGKYREAL KWEA L LAPD+PV+HEQKAQVLLE G
Sbjct: 43  ----VPDATQLANEFQAQGDKLAMDGKYREALGKWEAVLALAPDVPVVHEQKAQVLLETG 98

Query: 443 DAWNALKAATRATELEPSWAEAWVTLGRAQLNYGEPDNAIESFDRALALKPDYEEAQDDR 622
           DAWNALKAATRATEL+PSWAEAWVTLGRAQLN+GE DNAIESFD ALALKPDYEEAQDDR
Sbjct: 99  DAWNALKAATRATELDPSWAEAWVTLGRAQLNFGESDNAIESFDHALALKPDYEEAQDDR 158

Query: 623 KTALRLVKKRKQLHSSGLSATQNRYVVGDKDD 718
           KTA RLVKKRKQLHSSGLSATQNRY+VG+KD+
Sbjct: 159 KTASRLVKKRKQLHSSGLSATQNRYMVGEKDE 190


>ref|XP_002284637.2| PREDICTED: tetratricopeptide repeat protein 33-like [Vitis
           vinifera]
          Length = 205

 Score =  243 bits (621), Expect = 4e-62
 Identities = 135/212 (63%), Positives = 150/212 (70%), Gaps = 5/212 (2%)
 Frame = +2

Query: 92  MKVTWXXXXXXX---LCLPHLSDLPFEQHE--QPNSDPNNNRDTEDSSDGVRGGDSNSEQ 256
           MK+TW            L   S+LPFE  E  QP S      + E    G++  DS    
Sbjct: 1   MKITWKKQSKGSNRKRSLAASSNLPFEDEEAEQPTSTMEAKVEEEGDFRGLKTLDS---- 56

Query: 257 SFRHSDKEEARLLAKEFQAQGDNLATDGKYREALSKWEAALTLAPDIPVLHEQKAQVLLE 436
               SD    + LA  FQAQGD LA  GKYREAL KWE ALTL P   VLHEQKAQVLLE
Sbjct: 57  ----SDGPSTQQLADSFQAQGDKLAEGGKYREALGKWETALTLMPGKAVLHEQKAQVLLE 112

Query: 437 IGDAWNALKAATRATELEPSWAEAWVTLGRAQLNYGEPDNAIESFDRALALKPDYEEAQD 616
           IGDAWNALKAATRATELEPSWAEAW+TLGRAQLN+GEPD AI+SFDRALA+KP+ EEAQD
Sbjct: 113 IGDAWNALKAATRATELEPSWAEAWITLGRAQLNFGEPDIAIKSFDRALAIKPNSEEAQD 172

Query: 617 DRKTALRLVKKRKQLHSSGLSATQNRYVVGDK 712
           DRK+A  LVK+RKQLHSSGLS T+NR+VVGDK
Sbjct: 173 DRKSAFHLVKRRKQLHSSGLSDTENRFVVGDK 204


>gb|AFK42221.1| unknown [Medicago truncatula]
          Length = 131

 Score =  240 bits (612), Expect = 5e-61
 Identities = 116/130 (89%), Positives = 123/130 (94%)
 Frame = +2

Query: 335 DGKYREALSKWEAALTLAPDIPVLHEQKAQVLLEIGDAWNALKAATRATELEPSWAEAWV 514
           +GKYREAL KWEAALTLAPD+P LHEQKAQVLLEIGDAWNALKAA+RATEL+PSWAEAWV
Sbjct: 2   EGKYREALGKWEAALTLAPDVPALHEQKAQVLLEIGDAWNALKAASRATELKPSWAEAWV 61

Query: 515 TLGRAQLNYGEPDNAIESFDRALALKPDYEEAQDDRKTALRLVKKRKQLHSSGLSATQNR 694
           TLGRAQLNYGEPDNAIESFDRALALKPDYEEAQDDRKTA RL+KKRKQLHSSGLS  QNR
Sbjct: 62  TLGRAQLNYGEPDNAIESFDRALALKPDYEEAQDDRKTASRLIKKRKQLHSSGLSEIQNR 121

Query: 695 YVVGDKDDES 724
           Y VGDK++ S
Sbjct: 122 YTVGDKNESS 131


>ref|XP_002520288.1| conserved hypothetical protein [Ricinus communis]
           gi|223540507|gb|EEF42074.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 216

 Score =  238 bits (606), Expect = 2e-60
 Identities = 129/213 (60%), Positives = 151/213 (70%), Gaps = 1/213 (0%)
 Frame = +2

Query: 89  EMKVTWXXXXXXXL-CLPHLSDLPFEQHEQPNSDPNNNRDTEDSSDGVRGGDSNSEQSFR 265
           +MKV W          L    +LPF+Q +Q     N      + +   +G  S  E    
Sbjct: 14  KMKVIWKKDNKTKKRTLSKYPNLPFDQEDQERESLN------EITTNQQGFASQDEPLDS 67

Query: 266 HSDKEEARLLAKEFQAQGDNLATDGKYREALSKWEAALTLAPDIPVLHEQKAQVLLEIGD 445
            S+K+    LA+ FQ+QG+ LA DGKYREAL KWEAAL L P   VLHEQKAQVLLEIGD
Sbjct: 68  QSEKQ----LAESFQSQGNKLAEDGKYREALGKWEAALNLMPGSTVLHEQKAQVLLEIGD 123

Query: 446 AWNALKAATRATELEPSWAEAWVTLGRAQLNYGEPDNAIESFDRALALKPDYEEAQDDRK 625
           AWNALKAATRATELEPSWAEAW+TLGR QLN+GEPD+AIESFDRALALKPD +EAQDDR 
Sbjct: 124 AWNALKAATRATELEPSWAEAWITLGRTQLNFGEPDSAIESFDRALALKPDVKEAQDDRH 183

Query: 626 TALRLVKKRKQLHSSGLSATQNRYVVGDKDDES 724
            AL LVK+RKQLHSSGLSA ++R++V DK + S
Sbjct: 184 AALHLVKRRKQLHSSGLSANESRFMVADKAESS 216


>emb|CBI18954.3| unnamed protein product [Vitis vinifera]
          Length = 168

 Score =  236 bits (601), Expect = 9e-60
 Identities = 119/159 (74%), Positives = 131/159 (82%)
 Frame = +2

Query: 236 GDSNSEQSFRHSDKEEARLLAKEFQAQGDNLATDGKYREALSKWEAALTLAPDIPVLHEQ 415
           GD    ++   SD    + LA  FQAQGD LA  GKYREAL KWE ALTL P   VLHEQ
Sbjct: 9   GDFRGLKTLDSSDGPSTQQLADSFQAQGDKLAEGGKYREALGKWETALTLMPGKAVLHEQ 68

Query: 416 KAQVLLEIGDAWNALKAATRATELEPSWAEAWVTLGRAQLNYGEPDNAIESFDRALALKP 595
           KAQVLLEIGDAWNALKAATRATELEPSWAEAW+TLGRAQLN+GEPD AI+SFDRALA+KP
Sbjct: 69  KAQVLLEIGDAWNALKAATRATELEPSWAEAWITLGRAQLNFGEPDIAIKSFDRALAIKP 128

Query: 596 DYEEAQDDRKTALRLVKKRKQLHSSGLSATQNRYVVGDK 712
           + EEAQDDRK+A  LVK+RKQLHSSGLS T+NR+VVGDK
Sbjct: 129 NSEEAQDDRKSAFHLVKRRKQLHSSGLSDTENRFVVGDK 167


Top