BLASTX nr result

ID: Glycyrrhiza24_contig00000247 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000247
         (714 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629712.1| Ubiquitin-conjugating enzyme COP10 [Medicago...   320   2e-85
ref|XP_002299458.1| predicted protein [Populus trichocarpa] gi|2...   272   6e-71
ref|XP_002527080.1| ubiquitin-conjugating enzyme E2, putative [R...   270   2e-70
ref|NP_001236271.1| uncharacterized protein LOC100527196 [Glycin...   268   6e-70
ref|XP_004142171.1| PREDICTED: constitutive photomorphogenesis p...   261   1e-67

>ref|XP_003629712.1| Ubiquitin-conjugating enzyme COP10 [Medicago truncatula]
           gi|355523734|gb|AET04188.1| Ubiquitin-conjugating enzyme
           COP10 [Medicago truncatula] gi|388495558|gb|AFK35845.1|
           unknown [Medicago truncatula]
          Length = 168

 Score =  320 bits (819), Expect = 2e-85
 Identities = 149/162 (91%), Positives = 154/162 (95%)
 Frame = -1

Query: 714 GRSSTSSWGPATSASASGKRIQREMVELNNDPPPHCSAGPKGDNLYHWIATIIGTPGTPY 535
           GRSSTSSW P TS SASGKRIQREMVELNNDPPPHCSAGPKGDNLYHWIATIIGTPGTPY
Sbjct: 7   GRSSTSSWAPTTSVSASGKRIQREMVELNNDPPPHCSAGPKGDNLYHWIATIIGTPGTPY 66

Query: 534 QAGIFFLDIIFPTDYPFHPPQVVFKTRIYHCNVEPDGHVSMGILKDDWSPALTITKVLLA 355
           Q GIFFLDIIFPTDYPF PPQVVF+TRIYHCNVEPDG VSMGILKD WSPALTITKVLLA
Sbjct: 67  QGGIFFLDIIFPTDYPFKPPQVVFRTRIYHCNVEPDGRVSMGILKDGWSPALTITKVLLA 126

Query: 354 VRSILSNPDPYNAVVPGIAHLYLGDRAKHDEIAAEWTVRFAK 229
           VRS+L+NPDPYNAVVP IAHLYLGDRAKHD+IAAEWT+RFAK
Sbjct: 127 VRSLLTNPDPYNAVVPVIAHLYLGDRAKHDDIAAEWTIRFAK 168


>ref|XP_002299458.1| predicted protein [Populus trichocarpa] gi|222846716|gb|EEE84263.1|
           predicted protein [Populus trichocarpa]
          Length = 169

 Score =  272 bits (695), Expect = 6e-71
 Identities = 123/160 (76%), Positives = 141/160 (88%)
 Frame = -1

Query: 708 SSTSSWGPATSASASGKRIQREMVELNNDPPPHCSAGPKGDNLYHWIATIIGTPGTPYQA 529
           ++TSSW   +S S SGKRIQREM ELN DPPP CSAGPKGDNLYHWI+T+IG PGTPYQ 
Sbjct: 10  TATSSWVSPSSVSTSGKRIQREMTELNMDPPPDCSAGPKGDNLYHWISTVIGPPGTPYQG 69

Query: 528 GIFFLDIIFPTDYPFHPPQVVFKTRIYHCNVEPDGHVSMGILKDDWSPALTITKVLLAVR 349
           GIFFLD+ FP+DYPF PP+VVFKTRIYHCNV+  G++S+ ILKD WSPALTITKVLLA+R
Sbjct: 70  GIFFLDLTFPSDYPFKPPKVVFKTRIYHCNVDSAGNLSLDILKDSWSPALTITKVLLAIR 129

Query: 348 SILSNPDPYNAVVPGIAHLYLGDRAKHDEIAAEWTVRFAK 229
           SI ++PDPYN +VPGIAHLYL DRAKHDE+AAEWT+RFAK
Sbjct: 130 SIFTHPDPYNPLVPGIAHLYLADRAKHDELAAEWTLRFAK 169


>ref|XP_002527080.1| ubiquitin-conjugating enzyme E2, putative [Ricinus communis]
           gi|223533585|gb|EEF35324.1| ubiquitin-conjugating enzyme
           E2, putative [Ricinus communis]
          Length = 181

 Score =  270 bits (690), Expect = 2e-70
 Identities = 120/158 (75%), Positives = 140/158 (88%)
 Frame = -1

Query: 702 TSSWGPATSASASGKRIQREMVELNNDPPPHCSAGPKGDNLYHWIATIIGTPGTPYQAGI 523
           +SSW   TS S SGKRIQREM ELNNDPPP CSAGPKGDNLYHW++TIIG PGTPY+ GI
Sbjct: 24  SSSWVSPTSVSTSGKRIQREMGELNNDPPPDCSAGPKGDNLYHWVSTIIGPPGTPYEGGI 83

Query: 522 FFLDIIFPTDYPFHPPQVVFKTRIYHCNVEPDGHVSMGILKDDWSPALTITKVLLAVRSI 343
           FFLDI FPTDYPF PP+VVFKTRIYHCNV+  G++S+ +LKD WSPALTITK+L+A+RS+
Sbjct: 84  FFLDITFPTDYPFKPPKVVFKTRIYHCNVDSAGNLSLDMLKDGWSPALTITKILIAIRSV 143

Query: 342 LSNPDPYNAVVPGIAHLYLGDRAKHDEIAAEWTVRFAK 229
            ++PDPYN +VPGIAHLYL DRAKHDE+AA+WT+RFAK
Sbjct: 144 FTHPDPYNPLVPGIAHLYLADRAKHDELAAQWTMRFAK 181


>ref|NP_001236271.1| uncharacterized protein LOC100527196 [Glycine max]
           gi|255631762|gb|ACU16248.1| unknown [Glycine max]
          Length = 138

 Score =  268 bits (686), Expect = 6e-70
 Identities = 124/138 (89%), Positives = 129/138 (93%)
 Frame = -1

Query: 642 MVELNNDPPPHCSAGPKGDNLYHWIATIIGTPGTPYQAGIFFLDIIFPTDYPFHPPQVVF 463
           MVELNNDPPP CSAGPKGDNLYHWIATIIGTP TPYQ GIFFLDI FP DYPF PP+VVF
Sbjct: 1   MVELNNDPPPDCSAGPKGDNLYHWIATIIGTPETPYQGGIFFLDIKFPIDYPFKPPEVVF 60

Query: 462 KTRIYHCNVEPDGHVSMGILKDDWSPALTITKVLLAVRSILSNPDPYNAVVPGIAHLYLG 283
           KTRIYHCNV+PDG VSMGILKDDWSPALTITKVLL VRSI++NPDPYNAVVPGIAHLY G
Sbjct: 61  KTRIYHCNVDPDGRVSMGILKDDWSPALTITKVLLEVRSIMTNPDPYNAVVPGIAHLYSG 120

Query: 282 DRAKHDEIAAEWTVRFAK 229
           DRAKHD+IAAEWTVRFAK
Sbjct: 121 DRAKHDDIAAEWTVRFAK 138


>ref|XP_004142171.1| PREDICTED: constitutive photomorphogenesis protein 10-like [Cucumis
           sativus]
          Length = 185

 Score =  261 bits (667), Expect = 1e-67
 Identities = 123/169 (72%), Positives = 139/169 (82%), Gaps = 7/169 (4%)
 Frame = -1

Query: 714 GRSSTS-------SWGPATSASASGKRIQREMVELNNDPPPHCSAGPKGDNLYHWIATII 556
           GRSS+S       SW   TS SASGKRIQREM E N DPP  CSAGPKGDNLYHW ATI 
Sbjct: 17  GRSSSSISLAAPTSWASTTSVSASGKRIQREMTEFNLDPPSDCSAGPKGDNLYHWFATIF 76

Query: 555 GTPGTPYQAGIFFLDIIFPTDYPFHPPQVVFKTRIYHCNVEPDGHVSMGILKDDWSPALT 376
           G  GTPY+ GIFFLDIIFP+DYPF+PP+VVFKTRIYHCNV+  G+VS+ ILKD+WSPALT
Sbjct: 77  GPSGTPYEGGIFFLDIIFPSDYPFNPPKVVFKTRIYHCNVDSTGNVSLDILKDNWSPALT 136

Query: 375 ITKVLLAVRSILSNPDPYNAVVPGIAHLYLGDRAKHDEIAAEWTVRFAK 229
           I KVL+AV+SI +NP+PY+   PG+AHLYL DRAKHDEIAAEWT+RFAK
Sbjct: 137 IAKVLIAVKSIFANPNPYDPNAPGVAHLYLADRAKHDEIAAEWTLRFAK 185


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