BLASTX nr result

ID: Glycyrrhiza24_contig00000231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000231
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   214   6e-54
ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   213   1e-53
ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-spl...   202   2e-50
ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 ho...   202   2e-50
ref|XP_002530492.1| cell cycle control protein cwf22, putative [...   199   1e-49

>ref|XP_003541530.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max]
          Length = 860

 Score =  214 bits (545), Expect = 6e-54
 Identities = 114/155 (73%), Positives = 122/155 (78%), Gaps = 11/155 (7%)
 Frame = -1

Query: 432 VEKNGDTERDCREREVQXXXXXXXXXXXXRP-----------TVPGGGGDLNGDASNLGK 286
           VEK+GD ER+ RE++V                          T+PGG  +LNGD SNLGK
Sbjct: 226 VEKDGDNERNHREKDVSRRQEENGKKNDRNGRMVEDANPRRGTIPGG--NLNGDVSNLGK 283

Query: 285 SGGVYIPPFKLARMMKEVQDKSSPDYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAE 106
           SGGVYIPPFK+A MMKEVQDKSS +YQRLTWDALRKSINGLVNKVNATNIKNIIPELFAE
Sbjct: 284 SGGVYIPPFKMAMMMKEVQDKSSVEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFAE 343

Query: 105 NLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVN 1
           NLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVN
Sbjct: 344 NLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVN 378


>ref|XP_003530707.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Glycine max]
          Length = 871

 Score =  213 bits (543), Expect = 1e-53
 Identities = 114/156 (73%), Positives = 123/156 (78%), Gaps = 12/156 (7%)
 Frame = -1

Query: 432 VEKNGDTERDCREREVQXXXXXXXXXXXXR------------PTVPGGGGDLNGDASNLG 289
           VEK+G +ER+ RE++V                           T+PGG  +LNGDASNLG
Sbjct: 241 VEKDGGSERNHREKDVSKRQEESRKKEDGNGRMVEDEKPQRQATIPGG--NLNGDASNLG 298

Query: 288 KSGGVYIPPFKLARMMKEVQDKSSPDYQRLTWDALRKSINGLVNKVNATNIKNIIPELFA 109
           KSGGVYIPPFK+A MMKEVQDKSS +YQRLTWDALRKSINGLVNKVNATNIKNIIPELFA
Sbjct: 299 KSGGVYIPPFKMAMMMKEVQDKSSVEYQRLTWDALRKSINGLVNKVNATNIKNIIPELFA 358

Query: 108 ENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVN 1
           ENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVN
Sbjct: 359 ENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVN 394


>ref|XP_004162101.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor CWC22
           homolog, partial [Cucumis sativus]
          Length = 780

 Score =  202 bits (515), Expect = 2e-50
 Identities = 101/106 (95%), Positives = 104/106 (98%)
 Frame = -1

Query: 318 DLNGDASNLGKSGGVYIPPFKLARMMKEVQDKSSPDYQRLTWDALRKSINGLVNKVNATN 139
           +LN D+SNLGKSGGVYIPPFKLARMMKEVQDKSS +YQRLTWDALRKSINGLVNKVNATN
Sbjct: 210 NLNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALRKSINGLVNKVNATN 269

Query: 138 IKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVN 1
           IKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVN
Sbjct: 270 IKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVN 315


>ref|XP_004142129.1| PREDICTED: pre-mRNA-splicing factor CWC22 homolog [Cucumis sativus]
          Length = 797

 Score =  202 bits (515), Expect = 2e-50
 Identities = 101/106 (95%), Positives = 104/106 (98%)
 Frame = -1

Query: 318 DLNGDASNLGKSGGVYIPPFKLARMMKEVQDKSSPDYQRLTWDALRKSINGLVNKVNATN 139
           +LN D+SNLGKSGGVYIPPFKLARMMKEVQDKSS +YQRLTWDALRKSINGLVNKVNATN
Sbjct: 210 NLNPDSSNLGKSGGVYIPPFKLARMMKEVQDKSSIEYQRLTWDALRKSINGLVNKVNATN 269

Query: 138 IKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVN 1
           IKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVN
Sbjct: 270 IKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVN 315


>ref|XP_002530492.1| cell cycle control protein cwf22, putative [Ricinus communis]
           gi|223529949|gb|EEF31876.1| cell cycle control protein
           cwf22, putative [Ricinus communis]
          Length = 810

 Score =  199 bits (507), Expect = 1e-49
 Identities = 97/108 (89%), Positives = 103/108 (95%)
 Frame = -1

Query: 324 GGDLNGDASNLGKSGGVYIPPFKLARMMKEVQDKSSPDYQRLTWDALRKSINGLVNKVNA 145
           GG+LN +  NLGKSGGVYIPPFKLARMMKE++DKSS +YQRLTWDALRKSINGLVNKVNA
Sbjct: 188 GGNLNAETPNLGKSGGVYIPPFKLARMMKEIEDKSSTEYQRLTWDALRKSINGLVNKVNA 247

Query: 144 TNIKNIIPELFAENLIRGRGLFCRSCMKSQMASPGFTDVFAALVAVVN 1
           TNIKNIIPELF+ENLIRGRGLFCRSCMKSQMASPGFT VFAALVAVVN
Sbjct: 248 TNIKNIIPELFSENLIRGRGLFCRSCMKSQMASPGFTPVFAALVAVVN 295


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