BLASTX nr result

ID: Glycyrrhiza24_contig00000220 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000220
         (685 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003591517.1| 60S ribosomal protein L22-like protein [Medi...   176   3e-42
gb|AFK37749.1| unknown [Lotus japonicus] gi|388514599|gb|AFK4536...   175   7e-42
ref|XP_002321004.1| predicted protein [Populus trichocarpa] gi|2...   173   3e-41
gb|ABK94269.1| unknown [Populus trichocarpa]                          173   3e-41
ref|NP_001236862.1| uncharacterized protein LOC100305544 [Glycin...   172   4e-41

>ref|XP_003591517.1| 60S ribosomal protein L22-like protein [Medicago truncatula]
           gi|355480565|gb|AES61768.1| 60S ribosomal protein
           L22-like protein [Medicago truncatula]
           gi|388502928|gb|AFK39530.1| unknown [Medicago
           truncatula]
          Length = 119

 Score =  176 bits (447), Expect = 3e-42
 Identities = 94/119 (78%), Positives = 97/119 (81%)
 Frame = -2

Query: 627 MSXXXXXXXGTSFVIDCAKPVEDKIMDIASLEKFLQERIKVGCKAGALGDSVTVTRDKTK 448
           MS       GTSFVIDCAKPVEDKIMDIASLEKFLQERIKVG KAGALGDSVTVTR+K+K
Sbjct: 1   MSGVKGKKKGTSFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKSK 60

Query: 447 ITVTFDSNFSXXXXXXXXXXXXXKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEED 271
           ITVT DSNFS             KHNVRDWLRVIASNKDRN+YELRYFNIAENEGEEED
Sbjct: 61  ITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNIYELRYFNIAENEGEEED 119


>gb|AFK37749.1| unknown [Lotus japonicus] gi|388514599|gb|AFK45361.1| unknown
           [Lotus japonicus]
          Length = 119

 Score =  175 bits (444), Expect = 7e-42
 Identities = 93/119 (78%), Positives = 96/119 (80%)
 Frame = -2

Query: 627 MSXXXXXXXGTSFVIDCAKPVEDKIMDIASLEKFLQERIKVGCKAGALGDSVTVTRDKTK 448
           MS        TSFVIDCAKPVEDKIMDIASLEKFLQERIKVG KAGALGDSVTV+R+K+K
Sbjct: 1   MSGAKGKKKATSFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVSREKSK 60

Query: 447 ITVTFDSNFSXXXXXXXXXXXXXKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEED 271
           ITVT DSNFS             KHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEED
Sbjct: 61  ITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEED 119


>ref|XP_002321004.1| predicted protein [Populus trichocarpa] gi|222861777|gb|EEE99319.1|
           predicted protein [Populus trichocarpa]
          Length = 116

 Score =  173 bits (438), Expect = 3e-41
 Identities = 90/108 (83%), Positives = 92/108 (85%)
 Frame = -2

Query: 594 SFVIDCAKPVEDKIMDIASLEKFLQERIKVGCKAGALGDSVTVTRDKTKITVTFDSNFSX 415
           SFVIDCAKPVEDKIMDIASLEKFLQERIKVG KAGALGDSVTVTR+K KITVT DSNFS 
Sbjct: 9   SFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKNKITVTSDSNFSK 68

Query: 414 XXXXXXXXXXXXKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEED 271
                       KHNVRDWLRVI+SNKDRNVYELRYFNIAENEGEEED
Sbjct: 69  RYLKYLTKKYLKKHNVRDWLRVISSNKDRNVYELRYFNIAENEGEEED 116


>gb|ABK94269.1| unknown [Populus trichocarpa]
          Length = 122

 Score =  173 bits (438), Expect = 3e-41
 Identities = 90/108 (83%), Positives = 92/108 (85%)
 Frame = -2

Query: 594 SFVIDCAKPVEDKIMDIASLEKFLQERIKVGCKAGALGDSVTVTRDKTKITVTFDSNFSX 415
           SFVIDCAKPVEDKIMDIASLEKFLQERIKVG KAGALGDSVTVTR+K KITVT DSNFS 
Sbjct: 15  SFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSVTVTREKNKITVTSDSNFSK 74

Query: 414 XXXXXXXXXXXXKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEED 271
                       KHNVRDWLRVI+SNKDRNVYELRYFNIAENEGEEED
Sbjct: 75  RYLKYLTKKYLKKHNVRDWLRVISSNKDRNVYELRYFNIAENEGEEED 122


>ref|NP_001236862.1| uncharacterized protein LOC100305544 [Glycine max]
           gi|255625861|gb|ACU13275.1| unknown [Glycine max]
          Length = 119

 Score =  172 bits (437), Expect = 4e-41
 Identities = 92/119 (77%), Positives = 96/119 (80%)
 Frame = -2

Query: 627 MSXXXXXXXGTSFVIDCAKPVEDKIMDIASLEKFLQERIKVGCKAGALGDSVTVTRDKTK 448
           MS       G SFVIDCAKPVEDKIMDIASLEKFLQERIKVG KAGALGDS+TVTRDK+K
Sbjct: 1   MSGAKGKKKGASFVIDCAKPVEDKIMDIASLEKFLQERIKVGGKAGALGDSITVTRDKSK 60

Query: 447 ITVTFDSNFSXXXXXXXXXXXXXKHNVRDWLRVIASNKDRNVYELRYFNIAENEGEEED 271
           ITVT DSNFS             KHNVRDWLRVIASNK+R+VYELRYFNIAENEGEEED
Sbjct: 61  ITVTSDSNFSKRYLKYLTKKYLKKHNVRDWLRVIASNKERSVYELRYFNIAENEGEEED 119


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