BLASTX nr result

ID: Glycyrrhiza24_contig00000210 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000210
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001238000.1| uncharacterized protein LOC100527056 [Glycin...   194   6e-52
gb|AFK39849.1| unknown [Lotus japonicus] gi|388506620|gb|AFK4137...   199   3e-49
ref|XP_002280687.1| PREDICTED: photosystem I reaction center sub...   195   5e-48
emb|CAN77761.1| hypothetical protein VITISV_038784 [Vitis vinifera]   192   3e-47
ref|XP_003533844.1| PREDICTED: photosystem I reaction center sub...   191   1e-46

>ref|NP_001238000.1| uncharacterized protein LOC100527056 [Glycine max]
           gi|255631458|gb|ACU16096.1| unknown [Glycine max]
          Length = 161

 Score =  194 bits (494), Expect(2) = 6e-52
 Identities = 97/110 (88%), Positives = 103/110 (93%)
 Frame = +3

Query: 177 MATTVTTTLPQFNGLRPNFSASPVKNLVPVQSMRRKGKGALGVRCDFIGSSTNVIMVAST 356
           MATTV TTLPQF+GLRP FSA+PVKNLV VQ M RKGKGALG RCD+IGSSTN+IMVAST
Sbjct: 1   MATTVMTTLPQFSGLRPQFSAAPVKNLVAVQPMSRKGKGALGARCDYIGSSTNLIMVAST 60

Query: 357 SLMLFAGRFGLAPSANRKATAGLKLEARDSGLQTGDPAGFTLADTLACGT 506
           +LMLFAGRFGLAPSANRKATAGLKLE RDSGLQTGDPAGFTLADTLACG+
Sbjct: 61  TLMLFAGRFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLADTLACGS 110



 Score = 35.4 bits (80), Expect(2) = 6e-52
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +2

Query: 527 WGCSWS*EHWCIVK 568
           WGCSWS EHWC VK
Sbjct: 118 WGCSWSQEHWCPVK 131


>gb|AFK39849.1| unknown [Lotus japonicus] gi|388506620|gb|AFK41376.1| unknown
           [Lotus japonicus]
          Length = 129

 Score =  199 bits (506), Expect = 3e-49
 Identities = 102/129 (79%), Positives = 108/129 (83%)
 Frame = +3

Query: 177 MATTVTTTLPQFNGLRPNFSASPVKNLVPVQSMRRKGKGALGVRCDFIGSSTNVIMVAST 356
           MATTV TTLPQF+GLRP FSA+PV+NLV VQ MRRKG GALG RCDFIGS TN+IMVAST
Sbjct: 1   MATTVMTTLPQFSGLRPKFSATPVQNLVTVQPMRRKGNGALGARCDFIGSPTNLIMVAST 60

Query: 357 SLMLFAGRFGLAPSANRKATAGLKLEARDSGLQTGDPAGFTLADTLACGTXXXXXXXXXX 536
           +LMLFAGRFGLAPSANRKATAGLKLE RDSGLQTGDPAGFTLADTLACGT          
Sbjct: 61  TLMLFAGRFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLADTLACGTVGHIIGVGVV 120

Query: 537 XXXKNIGAL 563
              KNIG+L
Sbjct: 121 LGLKNIGSL 129


>ref|XP_002280687.1| PREDICTED: photosystem I reaction center subunit psaK,
           chloroplastic [Vitis vinifera]
           gi|297740792|emb|CBI30974.3| unnamed protein product
           [Vitis vinifera]
          Length = 129

 Score =  195 bits (495), Expect = 5e-48
 Identities = 101/129 (78%), Positives = 103/129 (79%)
 Frame = +3

Query: 177 MATTVTTTLPQFNGLRPNFSASPVKNLVPVQSMRRKGKGALGVRCDFIGSSTNVIMVAST 356
           MATTV TTLPQFNGLRP  S SPV+ L  VQ MRRKGKGALG RCDFIGS TN+IMV ST
Sbjct: 1   MATTVMTTLPQFNGLRPKSSTSPVQTLAAVQPMRRKGKGALGARCDFIGSPTNLIMVTST 60

Query: 357 SLMLFAGRFGLAPSANRKATAGLKLEARDSGLQTGDPAGFTLADTLACGTXXXXXXXXXX 536
           SLMLFAGRFGLAPSANRKATAGLKLE RDSGLQTGDPAGFTLADTLACGT          
Sbjct: 61  SLMLFAGRFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLADTLACGTVGHIIGVGVV 120

Query: 537 XXXKNIGAL 563
              KNIG L
Sbjct: 121 LGLKNIGVL 129


>emb|CAN77761.1| hypothetical protein VITISV_038784 [Vitis vinifera]
          Length = 129

 Score =  192 bits (489), Expect = 3e-47
 Identities = 100/129 (77%), Positives = 102/129 (79%)
 Frame = +3

Query: 177 MATTVTTTLPQFNGLRPNFSASPVKNLVPVQSMRRKGKGALGVRCDFIGSSTNVIMVAST 356
           MATTV TTLPQFNGLRP  S SPV+ L  VQ MRRKG GALG RCDFIGS TN+IMV ST
Sbjct: 1   MATTVMTTLPQFNGLRPKSSTSPVQTLAAVQPMRRKGXGALGARCDFIGSPTNLIMVTST 60

Query: 357 SLMLFAGRFGLAPSANRKATAGLKLEARDSGLQTGDPAGFTLADTLACGTXXXXXXXXXX 536
           SLMLFAGRFGLAPSANRKATAGLKLE RDSGLQTGDPAGFTLADTLACGT          
Sbjct: 61  SLMLFAGRFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLADTLACGTVGHIIGVGVV 120

Query: 537 XXXKNIGAL 563
              KNIG L
Sbjct: 121 LGLKNIGVL 129


>ref|XP_003533844.1| PREDICTED: photosystem I reaction center subunit psaK,
           chloroplastic-like [Glycine max]
          Length = 132

 Score =  191 bits (484), Expect = 1e-46
 Identities = 102/132 (77%), Positives = 109/132 (82%), Gaps = 3/132 (2%)
 Frame = +3

Query: 177 MATT--VTTTLPQFNGLRPNFSASPVKNLVPVQS-MRRKGKGALGVRCDFIGSSTNVIMV 347
           MATT  + TTLPQF+GLRP FSA+PVKNLV VQ  MR KGKGALG RCD+IGSSTN+IMV
Sbjct: 1   MATTTVIMTTLPQFSGLRPQFSAAPVKNLVAVQQPMRPKGKGALGARCDYIGSSTNLIMV 60

Query: 348 ASTSLMLFAGRFGLAPSANRKATAGLKLEARDSGLQTGDPAGFTLADTLACGTXXXXXXX 527
           AST+LMLFAGRFGLAPSANRKATAGLKLE RDSGLQTGDPAGFTLADTLACG+       
Sbjct: 61  ASTTLMLFAGRFGLAPSANRKATAGLKLEVRDSGLQTGDPAGFTLADTLACGSVGHIIGV 120

Query: 528 XXXXXXKNIGAL 563
                 KNIGAL
Sbjct: 121 GVVLGLKNIGAL 132


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