BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000159
         (504 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAM65487.1| chlorophyll a/b-binding protein-like [Arabidopsis...   106   2e-21
ref|NP_192772.1| chlorophyll a-b binding protein CP26 [Arabidops...   106   2e-21
ref|XP_002872508.1| hypothetical protein ARALYDRAFT_489877 [Arab...   106   2e-21
gb|ABG73417.1| chloroplast pigment-binding protein CP26 [Nicotia...   106   2e-21
gb|ACN40554.1| unknown [Picea sitchensis]                             103   2e-20

>gb|AAM65487.1| chlorophyll a/b-binding protein-like [Arabidopsis thaliana]
          Length = 280

 Score =  106 bits (264), Expect = 2e-21
 Identities = 62/130 (47%), Positives = 65/130 (50%)
 Frame = +2

Query: 2   PINLIXXXXXXXXXXXXXXYYRITNGLDFEDKLHPGGPFDPLGLAKDPDQAALLKVKEIK 181
           PINL+              YYRITNGLDFEDKLHPGGPFDPLGLAKDP+Q ALLKVKEIK
Sbjct: 168 PINLVLAVVAEVVLLGGSEYYRITNGLDFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIK 227

Query: 182 NGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFGNNLLTV 361
           NG                                                 PFGNNLLTV
Sbjct: 228 NG------------------RLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTV 269

Query: 362 LAGNAERAPT 391
           +AG AERAPT
Sbjct: 270 IAGTAERAPT 279


>ref|NP_192772.1| chlorophyll a-b binding protein CP26 [Arabidopsis thaliana]
           gi|28558077|sp|Q9XF89.1|CB5_ARATH RecName:
           Full=Chlorophyll a-b binding protein CP26,
           chloroplastic; AltName: Full=LHCB5; AltName:
           Full=LHCIIc; AltName: Full=Light-harvesting complex II
           protein 5; Flags: Precursor
           gi|4741958|gb|AAD28776.1|AF134129_1 Lhcb5 protein
           [Arabidopsis thaliana]
           gi|11908106|gb|AAG41482.1|AF326900_1 putative
           chlorophyll a/b-binding protein [Arabidopsis thaliana]
           gi|12642916|gb|AAK00400.1|AF339718_1 putative
           chlorophyll a/b-binding protein [Arabidopsis thaliana]
           gi|14190463|gb|AAK55712.1|AF380631_1
           AT4g10340/F24G24_140 [Arabidopsis thaliana]
           gi|15983446|gb|AAL11591.1|AF424597_1
           AT4g10340/F24G24_140 [Arabidopsis thaliana]
           gi|4538963|emb|CAB39787.1| chlorophyll a/b-binding
           protein-like [Arabidopsis thaliana]
           gi|7267731|emb|CAB78157.1| chlorophyll a/b-binding
           protein-like [Arabidopsis thaliana]
           gi|15809718|gb|AAL06787.1| AT4g10340/F24G24_140
           [Arabidopsis thaliana] gi|332657469|gb|AEE82869.1|
           chlorophyll a-b binding protein CP26 [Arabidopsis
           thaliana]
          Length = 280

 Score =  106 bits (264), Expect = 2e-21
 Identities = 62/130 (47%), Positives = 65/130 (50%)
 Frame = +2

Query: 2   PINLIXXXXXXXXXXXXXXYYRITNGLDFEDKLHPGGPFDPLGLAKDPDQAALLKVKEIK 181
           PINL+              YYRITNGLDFEDKLHPGGPFDPLGLAKDP+Q ALLKVKEIK
Sbjct: 168 PINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIK 227

Query: 182 NGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFGNNLLTV 361
           NG                                                 PFGNNLLTV
Sbjct: 228 NG------------------RLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTV 269

Query: 362 LAGNAERAPT 391
           +AG AERAPT
Sbjct: 270 IAGTAERAPT 279


>ref|XP_002872508.1| hypothetical protein ARALYDRAFT_489877 [Arabidopsis lyrata subsp.
           lyrata] gi|297318345|gb|EFH48767.1| hypothetical protein
           ARALYDRAFT_489877 [Arabidopsis lyrata subsp. lyrata]
          Length = 280

 Score =  106 bits (264), Expect = 2e-21
 Identities = 62/130 (47%), Positives = 65/130 (50%)
 Frame = +2

Query: 2   PINLIXXXXXXXXXXXXXXYYRITNGLDFEDKLHPGGPFDPLGLAKDPDQAALLKVKEIK 181
           PINL+              YYRITNGLDFEDKLHPGGPFDPLGLAKDP+Q ALLKVKEIK
Sbjct: 168 PINLVLAVVAEVVLLGGAEYYRITNGLDFEDKLHPGGPFDPLGLAKDPEQGALLKVKEIK 227

Query: 182 NGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFGNNLLTV 361
           NG                                                 PFGNNLLTV
Sbjct: 228 NG------------------RLAMFAMLGFFIQAYVTGEGPVENLAKHLSDPFGNNLLTV 269

Query: 362 LAGNAERAPT 391
           +AG AERAPT
Sbjct: 270 IAGTAERAPT 279


>gb|ABG73417.1| chloroplast pigment-binding protein CP26 [Nicotiana tabacum]
          Length = 285

 Score =  106 bits (264), Expect = 2e-21
 Identities = 62/130 (47%), Positives = 65/130 (50%)
 Frame = +2

Query: 2   PINLIXXXXXXXXXXXXXXYYRITNGLDFEDKLHPGGPFDPLGLAKDPDQAALLKVKEIK 181
           PINL+              YYRITNGLD EDKLHPGGPFDPLGLAKDPDQAA+LKVKEIK
Sbjct: 173 PINLVVAVVAEVVLLGGAEYYRITNGLDLEDKLHPGGPFDPLGLAKDPDQAAILKVKEIK 232

Query: 182 NGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFGNNLLTV 361
           NG                                                 PFGNNLLTV
Sbjct: 233 NG------------------RLAMFAMLGFFIQAYVTGKGPVENLAAHLSDPFGNNLLTV 274

Query: 362 LAGNAERAPT 391
           +AG AERAPT
Sbjct: 275 IAGTAERAPT 284


>gb|ACN40554.1| unknown [Picea sitchensis]
          Length = 278

 Score =  103 bits (256), Expect = 2e-20
 Identities = 62/130 (47%), Positives = 63/130 (48%)
 Frame = +2

Query: 2   PINLIXXXXXXXXXXXXXXYYRITNGLDFEDKLHPGGPFDPLGLAKDPDQAALLKVKEIK 181
           PINLI              YYR TNGLDFEDKLHPGGPFDPLGLAKDPDQ ALLKVKEIK
Sbjct: 166 PINLIAAVVAEVILVGGAEYYRATNGLDFEDKLHPGGPFDPLGLAKDPDQFALLKVKEIK 225

Query: 182 NGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPFGNNLLTV 361
           NG                                                 PFGNNLLTV
Sbjct: 226 NG------------------RLAMFSMLGFFVQAYVTGEGPVENLAAHLSDPFGNNLLTV 267

Query: 362 LAGNAERAPT 391
           L G+ ERAPT
Sbjct: 268 LGGSLERAPT 277