BLASTX nr result

ID: Glycyrrhiza24_contig00000111 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000111
         (1385 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003516950.1| PREDICTED: chlorophyll a-b binding protein C...   499   e-139
ref|XP_003520609.1| PREDICTED: chlorophyll a-b binding protein C...   493   e-137
gb|ACU19827.1| unknown [Glycine max]                                  487   e-135
ref|XP_003604653.1| Chlorophyll a-b binding protein [Medicago tr...   485   e-134
gb|ACJ84724.1| unknown [Medicago truncatula] gi|388501002|gb|AFK...   485   e-134

>ref|XP_003516950.1| PREDICTED: chlorophyll a-b binding protein CP29.2, chloroplastic-like
            [Glycine max]
          Length = 290

 Score =  499 bits (1284), Expect = e-139
 Identities = 247/275 (89%), Positives = 251/275 (91%), Gaps = 6/275 (2%)
 Frame = -2

Query: 1330 FIGTRSM------GRVQARFGFGTXXXXXXXXXXPGRGSGSDRPLWYPGAKAPEYLDGSL 1169
            F+GTR +      GRVQARFGFG            G GS SDRPLWYPGAKAPEYLDGSL
Sbjct: 12   FMGTRLLEAHSGAGRVQARFGFGKKKAAAPKKVSRGSGSSSDRPLWYPGAKAPEYLDGSL 71

Query: 1168 VGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNLAGDIIGTRTEFADVKSTPFQPYSEVFG 989
            VGDYGFDPFGLGKPAEYLQFELDSLDQNLAKN+AGDIIGTRTE ADVKSTPFQPYSEVFG
Sbjct: 72   VGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDIIGTRTELADVKSTPFQPYSEVFG 131

Query: 988  LQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLI 809
            LQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLI
Sbjct: 132  LQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLI 191

Query: 808  WIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLASDPEKKATLQLAEIKHARLAMVA 629
            WIEVLVIGYIEFQRNAELDPEKRLYPGG +FDPLGLASDPEKKATLQLAEIKHARLAMV 
Sbjct: 192  WIEVLVIGYIEFQRNAELDPEKRLYPGGSYFDPLGLASDPEKKATLQLAEIKHARLAMVG 251

Query: 628  FLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 524
            FLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
Sbjct: 252  FLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 286


>ref|XP_003520609.1| PREDICTED: chlorophyll a-b binding protein CP29.2, chloroplastic-like
            [Glycine max]
          Length = 290

 Score =  493 bits (1270), Expect = e-137
 Identities = 244/275 (88%), Positives = 249/275 (90%), Gaps = 6/275 (2%)
 Frame = -2

Query: 1330 FIGTRSM------GRVQARFGFGTXXXXXXXXXXPGRGSGSDRPLWYPGAKAPEYLDGSL 1169
            F+GTR +      GRV ARFGFG            G G  +DRPLWYPGAKAPEYLDGSL
Sbjct: 12   FMGTRLLEAHSGAGRVHARFGFGKKKAPAQKKASRGSGRDTDRPLWYPGAKAPEYLDGSL 71

Query: 1168 VGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNLAGDIIGTRTEFADVKSTPFQPYSEVFG 989
            VGDYGFDPFGLGKPAEYLQFELDSLDQNLAKN+AGDIIGTRTE ADVKSTPFQPYSEVFG
Sbjct: 72   VGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDIIGTRTELADVKSTPFQPYSEVFG 131

Query: 988  LQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLI 809
            LQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLI
Sbjct: 132  LQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLI 191

Query: 808  WIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLASDPEKKATLQLAEIKHARLAMVA 629
            WIEVLVIGYIEFQRNAELDPEKRLYPGG +FDPLGLASDPEKKATLQLAEIKHARLAMV 
Sbjct: 192  WIEVLVIGYIEFQRNAELDPEKRLYPGGSYFDPLGLASDPEKKATLQLAEIKHARLAMVG 251

Query: 628  FLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 524
            FLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
Sbjct: 252  FLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 286


>gb|ACU19827.1| unknown [Glycine max]
          Length = 290

 Score =  487 bits (1253), Expect = e-135
 Identities = 241/275 (87%), Positives = 246/275 (89%), Gaps = 6/275 (2%)
 Frame = -2

Query: 1330 FIGTRSM------GRVQARFGFGTXXXXXXXXXXPGRGSGSDRPLWYPGAKAPEYLDGSL 1169
            F+GTR +      GRV ARFGFG            G G  + RPLWYPGAKAPEYLDGSL
Sbjct: 12   FMGTRLLEAHSGAGRVHARFGFGKKKAPAQKKASRGSGRDTVRPLWYPGAKAPEYLDGSL 71

Query: 1168 VGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNLAGDIIGTRTEFADVKSTPFQPYSEVFG 989
            VGDYGFDPFGLGKPAEYLQFELDSLDQNLAKN+AGDIIGTRTE ADVKSTPFQPYSEVFG
Sbjct: 72   VGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNVAGDIIGTRTELADVKSTPFQPYSEVFG 131

Query: 988  LQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLI 809
            LQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLI
Sbjct: 132  LQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTLI 191

Query: 808  WIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLASDPEKKATLQLAEIKHARLAMVA 629
            WIE LVIGYIEFQRNAELDPEKRLYPGG +FDPLGLASDPEKKATLQLAEIKHARLAMV 
Sbjct: 192  WIEALVIGYIEFQRNAELDPEKRLYPGGSYFDPLGLASDPEKKATLQLAEIKHARLAMVG 251

Query: 628  FLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 524
            FLGFAVQAA TGKGPLNNWATHLSDPLHTTIIDTF
Sbjct: 252  FLGFAVQAAVTGKGPLNNWATHLSDPLHTTIIDTF 286


>ref|XP_003604653.1| Chlorophyll a-b binding protein [Medicago truncatula]
            gi|355505708|gb|AES86850.1| Chlorophyll a-b binding
            protein [Medicago truncatula]
          Length = 347

 Score =  485 bits (1249), Expect = e-134
 Identities = 244/276 (88%), Positives = 252/276 (91%), Gaps = 7/276 (2%)
 Frame = -2

Query: 1330 FIGTR------SMGRVQARFGFGTXXXXXXXXXXPGRGSGS-DRPLWYPGAKAPEYLDGS 1172
            FIGTR      + GR+QARFGFG             R S S DRPLW+PGAK+PE+LDGS
Sbjct: 72   FIGTRLREVQSNSGRIQARFGFGKKKAAPKKP---SRSSPSTDRPLWFPGAKSPEWLDGS 128

Query: 1171 LVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNLAGDIIGTRTEFADVKSTPFQPYSEVF 992
            LVGDYGFDPFGLGKPAEYLQF+LDSLDQNLAKNLAGD+IGTRTEFADVKSTPFQPYSEVF
Sbjct: 129  LVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLAGDVIGTRTEFADVKSTPFQPYSEVF 188

Query: 991  GLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTL 812
            GLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGS+YLGQPLPFSITTL
Sbjct: 189  GLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSTYLGQPLPFSITTL 248

Query: 811  IWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLASDPEKKATLQLAEIKHARLAMV 632
            IWIEVLVIGYIEFQRNAELD EKRLYPGGKFFDPLGLASDPEKKATLQLAEIKHARLAMV
Sbjct: 249  IWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPEKKATLQLAEIKHARLAMV 308

Query: 631  AFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 524
            AFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
Sbjct: 309  AFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 344


>gb|ACJ84724.1| unknown [Medicago truncatula] gi|388501002|gb|AFK38567.1| unknown
            [Medicago truncatula]
          Length = 289

 Score =  485 bits (1249), Expect = e-134
 Identities = 244/276 (88%), Positives = 252/276 (91%), Gaps = 7/276 (2%)
 Frame = -2

Query: 1330 FIGTR------SMGRVQARFGFGTXXXXXXXXXXPGRGSGS-DRPLWYPGAKAPEYLDGS 1172
            FIGTR      + GR+QARFGFG             R S S DRPLW+PGAK+PE+LDGS
Sbjct: 14   FIGTRLREVQSNSGRIQARFGFGKKKAAPKKP---SRSSPSTDRPLWFPGAKSPEWLDGS 70

Query: 1171 LVGDYGFDPFGLGKPAEYLQFELDSLDQNLAKNLAGDIIGTRTEFADVKSTPFQPYSEVF 992
            LVGDYGFDPFGLGKPAEYLQF+LDSLDQNLAKNLAGD+IGTRTEFADVKSTPFQPYSEVF
Sbjct: 71   LVGDYGFDPFGLGKPAEYLQFDLDSLDQNLAKNLAGDVIGTRTEFADVKSTPFQPYSEVF 130

Query: 991  GLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYLGQPLPFSITTL 812
            GLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGS+YLGQPLPFSITTL
Sbjct: 131  GLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSTYLGQPLPFSITTL 190

Query: 811  IWIEVLVIGYIEFQRNAELDPEKRLYPGGKFFDPLGLASDPEKKATLQLAEIKHARLAMV 632
            IWIEVLVIGYIEFQRNAELD EKRLYPGGKFFDPLGLASDPEKKATLQLAEIKHARLAMV
Sbjct: 191  IWIEVLVIGYIEFQRNAELDSEKRLYPGGKFFDPLGLASDPEKKATLQLAEIKHARLAMV 250

Query: 631  AFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 524
            AFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF
Sbjct: 251  AFLGFAVQAAATGKGPLNNWATHLSDPLHTTIIDTF 286


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