BLASTX nr result
ID: Glycyrrhiza24_contig00000087
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza24_contig00000087
(1204 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002272584.1| PREDICTED: photosystem I reaction center sub... 163 7e-38
gb|AFK41712.1| unknown [Medicago truncatula] 162 1e-37
emb|CAN76343.1| hypothetical protein VITISV_039382 [Vitis vinifera] 162 2e-37
ref|XP_004150631.1| PREDICTED: photosystem I reaction center sub... 160 5e-37
gb|ACJ83279.1| unknown [Medicago truncatula] 159 1e-36
>ref|XP_002272584.1| PREDICTED: photosystem I reaction center subunit III, chloroplastic
isoform 1 [Vitis vinifera]
gi|359495313|ref|XP_003634953.1| PREDICTED: photosystem
I reaction center subunit III, chloroplastic isoform 2
[Vitis vinifera]
Length = 221
Score = 163 bits (413), Expect = 7e-38
Identities = 75/80 (93%), Positives = 79/80 (98%)
Frame = -3
Query: 602 GDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDDKKPTQKEIIIDVPLATRLVFRGF 423
GDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDDKKPTQKEIIIDVPLA+RLVFRGF
Sbjct: 142 GDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDDKKPTQKEIIIDVPLASRLVFRGF 201
Query: 422 SWPVAAYREFLNGELVAKDV 363
WPVAAYREF+NG+L+AKDV
Sbjct: 202 IWPVAAYREFVNGDLIAKDV 221
Score = 66.6 bits (161), Expect = 1e-08
Identities = 45/97 (46%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Frame = -2
Query: 1023 MSLTIPTNLSKPTTLRPKLT----QKPRPTTTILCSTTTNPNHENTDXXXXXXXXXXXXX 856
MSLTIPTNLSKP L+P+L+ QK RP I+CS +T P N
Sbjct: 1 MSLTIPTNLSKP--LKPRLSSPSFQKARPM--IVCSASTEPQPTNKSPLQAFSAALALSS 56
Query: 855 XXXXXXXXXXXXXADISGLTPCKESKQFAKREKQQIK 745
DI+GLTPCKESKQFAKREKQ +K
Sbjct: 57 IILAAPVPAYA---DIAGLTPCKESKQFAKREKQALK 90
>gb|AFK41712.1| unknown [Medicago truncatula]
Length = 224
Score = 162 bits (411), Expect = 1e-37
Identities = 74/80 (92%), Positives = 79/80 (98%)
Frame = -3
Query: 602 GDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDDKKPTQKEIIIDVPLATRLVFRGF 423
GDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRD+KKPTQKEIIIDVPLA+RLVFRGF
Sbjct: 145 GDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLASRLVFRGF 204
Query: 422 SWPVAAYREFLNGELVAKDV 363
SWP+AAYRE +NGEL+AKDV
Sbjct: 205 SWPIAAYRELVNGELIAKDV 224
Score = 79.7 bits (195), Expect = 1e-12
Identities = 51/95 (53%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Frame = -2
Query: 1023 MSLTIPTNLSKPT-TLRPKLTQKPRPTTTIL-CSTTTNPNHENTDXXXXXXXXXXXXXXX 850
MSLTIPTNLSKPT TLRPKL QKP+ +T I+ CST N D
Sbjct: 1 MSLTIPTNLSKPTSTLRPKLPQKPKLSTNIIHCST--NQEKPTNDVNSNLKAFSAALALS 58
Query: 849 XXXXXXXXXXXADISGLTPCKESKQFAKREKQQIK 745
ADISGLTPC+ESKQFAKREKQ IK
Sbjct: 59 SILISSPLPAVADISGLTPCRESKQFAKREKQSIK 93
>emb|CAN76343.1| hypothetical protein VITISV_039382 [Vitis vinifera]
Length = 221
Score = 162 bits (409), Expect = 2e-37
Identities = 74/80 (92%), Positives = 79/80 (98%)
Frame = -3
Query: 602 GDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDDKKPTQKEIIIDVPLATRLVFRGF 423
GDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRD+KKPTQKEIIIDVPLA+RLVFRGF
Sbjct: 142 GDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLASRLVFRGF 201
Query: 422 SWPVAAYREFLNGELVAKDV 363
WPVAAYREF+NG+L+AKDV
Sbjct: 202 IWPVAAYREFVNGDLIAKDV 221
Score = 66.6 bits (161), Expect = 1e-08
Identities = 45/97 (46%), Positives = 52/97 (53%), Gaps = 4/97 (4%)
Frame = -2
Query: 1023 MSLTIPTNLSKPTTLRPKLT----QKPRPTTTILCSTTTNPNHENTDXXXXXXXXXXXXX 856
MSLTIPTNLSKP L+P+L+ QK RP I+CS +T P N
Sbjct: 1 MSLTIPTNLSKP--LKPRLSSPSFQKARPM--IVCSASTEPQPTNKSPLQAFSAALALSS 56
Query: 855 XXXXXXXXXXXXXADISGLTPCKESKQFAKREKQQIK 745
DI+GLTPCKESKQFAKREKQ +K
Sbjct: 57 IILAAPVPAYA---DIAGLTPCKESKQFAKREKQALK 90
>ref|XP_004150631.1| PREDICTED: photosystem I reaction center subunit III,
chloroplastic-like [Cucumis sativus]
gi|449487680|ref|XP_004157747.1| PREDICTED: photosystem
I reaction center subunit III, chloroplastic-like
[Cucumis sativus]
Length = 224
Score = 160 bits (406), Expect = 5e-37
Identities = 74/80 (92%), Positives = 77/80 (96%)
Frame = -3
Query: 602 GDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDDKKPTQKEIIIDVPLATRLVFRGF 423
GDQRHWGEFITPG LFLYIAGWIGWVGRSYLIAIRD+KKPTQKEIIIDVPLAT LVFRGF
Sbjct: 145 GDQRHWGEFITPGFLFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVPLATSLVFRGF 204
Query: 422 SWPVAAYREFLNGELVAKDV 363
SWPVAAYRE +NGEL+AKDV
Sbjct: 205 SWPVAAYRELVNGELIAKDV 224
Score = 77.4 bits (189), Expect = 7e-12
Identities = 48/97 (49%), Positives = 55/97 (56%), Gaps = 4/97 (4%)
Frame = -2
Query: 1023 MSLTIPTNLSKPTTLRPK----LTQKPRPTTTILCSTTTNPNHENTDXXXXXXXXXXXXX 856
MSLTIPTNLSKP L+PK L KP+P+++ILCS + N N +
Sbjct: 1 MSLTIPTNLSKPL-LKPKFSSPLALKPKPSSSILCSASQNQNQNTSSSLQAFSAALALSS 59
Query: 855 XXXXXXXXXXXXXADISGLTPCKESKQFAKREKQQIK 745
DISGLTPCKESKQFAKREKQQIK
Sbjct: 60 ILLSAPLPAVA---DISGLTPCKESKQFAKREKQQIK 93
>gb|ACJ83279.1| unknown [Medicago truncatula]
Length = 224
Score = 159 bits (403), Expect = 1e-36
Identities = 73/80 (91%), Positives = 78/80 (97%)
Frame = -3
Query: 602 GDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDDKKPTQKEIIIDVPLATRLVFRGF 423
GDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRD+KKPTQKEIIIDV LA+RLVFRGF
Sbjct: 145 GDQRHWGEFITPGILFLYIAGWIGWVGRSYLIAIRDEKKPTQKEIIIDVTLASRLVFRGF 204
Query: 422 SWPVAAYREFLNGELVAKDV 363
SWP+AAYRE +NGEL+AKDV
Sbjct: 205 SWPIAAYRELVNGELIAKDV 224
Score = 79.7 bits (195), Expect = 1e-12
Identities = 51/95 (53%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Frame = -2
Query: 1023 MSLTIPTNLSKPT-TLRPKLTQKPRPTTTIL-CSTTTNPNHENTDXXXXXXXXXXXXXXX 850
MSLTIPTNLSKPT TLRPKL QKP+ +T I+ CST N D
Sbjct: 1 MSLTIPTNLSKPTSTLRPKLPQKPKLSTNIIHCST--NQEKPTNDVNSNLKAFSAALALS 58
Query: 849 XXXXXXXXXXXADISGLTPCKESKQFAKREKQQIK 745
ADISGLTPC+ESKQFAKREKQ IK
Sbjct: 59 SILISSPLPAVADISGLTPCRESKQFAKREKQSIK 93