BLASTX nr result

ID: Glycyrrhiza24_contig00000083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000083
         (909 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK39810.1| unknown [Lotus japonicus] gi|388512023|gb|AFK4407...   207   4e-51
gb|AAQ24852.1| 10 kDa photosystem II polypeptide [Trifolium prat...   207   4e-51
ref|NP_001235442.1| uncharacterized protein LOC100499745 [Glycin...   205   1e-50
ref|XP_003595981.1| Photosystem II 10 kDa polypeptide [Medicago ...   204   2e-50
gb|ABW35320.1| chloroplast photosystem II PsbR [Prosopis juliflora]   202   1e-49

>gb|AFK39810.1| unknown [Lotus japonicus] gi|388512023|gb|AFK44073.1| unknown
           [Lotus japonicus]
          Length = 139

 Score =  207 bits (526), Expect = 4e-51
 Identities = 105/137 (76%), Positives = 115/137 (83%)
 Frame = +3

Query: 93  MASSVMASLSLKPAPFTVEKSSSVRGLPSLARTXXXXXFKIVASGGKKIKTDTPYGTGGG 272
           MASSVMAS+SLKPA F++EKSS VRGLPSL+R+     F++VASGGKKIKTDTPYGTGGG
Sbjct: 1   MASSVMASVSLKPAGFSLEKSS-VRGLPSLSRSSAS--FRVVASGGKKIKTDTPYGTGGG 57

Query: 273 MNLPQGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYDTKDWSPTGDVYTGGTTGLAIWA 452
           MNL  G+DASGRK +GKGVYQ+VDKYGANVDGYSPIYDTKDWSPTGDVY GGTTGLAIWA
Sbjct: 58  MNLRNGVDASGRKPRGKGVYQYVDKYGANVDGYSPIYDTKDWSPTGDVYAGGTTGLAIWA 117

Query: 453 VTXXXXXXXXXXXVYNT 503
           VT           VYNT
Sbjct: 118 VTLLGLLAGGALLVYNT 134


>gb|AAQ24852.1| 10 kDa photosystem II polypeptide [Trifolium pratense]
          Length = 136

 Score =  207 bits (526), Expect = 4e-51
 Identities = 106/137 (77%), Positives = 113/137 (82%)
 Frame = +3

Query: 93  MASSVMASLSLKPAPFTVEKSSSVRGLPSLARTXXXXXFKIVASGGKKIKTDTPYGTGGG 272
           MASSVMAS+SLKP PF VEKSS VRGLP+L+R      F++VASG KKIKTDTPYGTGGG
Sbjct: 1   MASSVMASVSLKPTPFMVEKSS-VRGLPNLSRP-----FRVVASGVKKIKTDTPYGTGGG 54

Query: 273 MNLPQGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYDTKDWSPTGDVYTGGTTGLAIWA 452
           M+LP GLDASGRK KGKGVYQFVDKYGANVDGYSPIY+ KDWSPTGDVYTGGTTGLAIWA
Sbjct: 55  MDLPNGLDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSPTGDVYTGGTTGLAIWA 114

Query: 453 VTXXXXXXXXXXXVYNT 503
           VT           VYNT
Sbjct: 115 VTLAGLLAGGALLVYNT 131


>ref|NP_001235442.1| uncharacterized protein LOC100499745 [Glycine max]
           gi|255626243|gb|ACU13466.1| unknown [Glycine max]
          Length = 139

 Score =  205 bits (521), Expect = 1e-50
 Identities = 105/137 (76%), Positives = 112/137 (81%)
 Frame = +3

Query: 93  MASSVMASLSLKPAPFTVEKSSSVRGLPSLARTXXXXXFKIVASGGKKIKTDTPYGTGGG 272
           MASSVMAS++LKPAPFTVEKSS VRGLPSL+R      F++VASGGKKIKTD PYG  GG
Sbjct: 1   MASSVMASVALKPAPFTVEKSS-VRGLPSLSRNSSS--FRVVASGGKKIKTDKPYGINGG 57

Query: 273 MNLPQGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYDTKDWSPTGDVYTGGTTGLAIWA 452
           M L +G+DASGRK KGKGVYQFVDKYGANVDGYSPIYDTKDWSPTGDVY GGTTGLAIWA
Sbjct: 58  MALREGVDASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSPTGDVYAGGTTGLAIWA 117

Query: 453 VTXXXXXXXXXXXVYNT 503
           VT           VYNT
Sbjct: 118 VTLLGLLAGGALLVYNT 134


>ref|XP_003595981.1| Photosystem II 10 kDa polypeptide [Medicago truncatula]
           gi|355485029|gb|AES66232.1| Photosystem II 10 kDa
           polypeptide [Medicago truncatula]
           gi|388509646|gb|AFK42889.1| unknown [Medicago
           truncatula]
          Length = 136

 Score =  204 bits (520), Expect = 2e-50
 Identities = 106/137 (77%), Positives = 111/137 (81%)
 Frame = +3

Query: 93  MASSVMASLSLKPAPFTVEKSSSVRGLPSLARTXXXXXFKIVASGGKKIKTDTPYGTGGG 272
           MASSVMAS+SLKP PF VEKSS VRGLP+L+R      FK+VASG KKIKTDTPYGTGGG
Sbjct: 1   MASSVMASVSLKPTPFRVEKSS-VRGLPALSRP-----FKVVASGVKKIKTDTPYGTGGG 54

Query: 273 MNLPQGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYDTKDWSPTGDVYTGGTTGLAIWA 452
           M LP G DASGRK KGKGVYQFVDKYGANVDGYSPIY+ KDWSPTGDVYTGGTTGLAIWA
Sbjct: 55  MALPDGKDASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSPTGDVYTGGTTGLAIWA 114

Query: 453 VTXXXXXXXXXXXVYNT 503
           VT           VYNT
Sbjct: 115 VTLAGLLAGGALLVYNT 131


>gb|ABW35320.1| chloroplast photosystem II PsbR [Prosopis juliflora]
          Length = 139

 Score =  202 bits (513), Expect = 1e-49
 Identities = 102/137 (74%), Positives = 113/137 (82%)
 Frame = +3

Query: 93  MASSVMASLSLKPAPFTVEKSSSVRGLPSLARTXXXXXFKIVASGGKKIKTDTPYGTGGG 272
           MASSVMAS+SLKPAPFTVEKS+ VRGLPSL+R+     FK+VASGGKKIKTD PYG  GG
Sbjct: 1   MASSVMASVSLKPAPFTVEKSA-VRGLPSLSRSSSS--FKVVASGGKKIKTDKPYGINGG 57

Query: 273 MNLPQGLDASGRKAKGKGVYQFVDKYGANVDGYSPIYDTKDWSPTGDVYTGGTTGLAIWA 452
           MNL +G+D+SGRK KGKGVYQFVDKYG NVDGYSPIY+T+DWSP+GDVY GGTTGLAIWA
Sbjct: 58  MNLVEGVDSSGRKGKGKGVYQFVDKYGTNVDGYSPIYNTEDWSPSGDVYVGGTTGLAIWA 117

Query: 453 VTXXXXXXXXXXXVYNT 503
           VT           VYNT
Sbjct: 118 VTLAGLLAGGALLVYNT 134


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