BLASTX nr result

ID: Glycyrrhiza24_contig00000051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000051
         (1145 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603370.1| ATP synthase [Medicago truncatula] gi|355492...   113   1e-22
ref|XP_003526371.1| PREDICTED: ATP synthase subunit b', chloropl...   109   1e-21
ref|NP_001237239.1| uncharacterized protein LOC100527009 [Glycin...   109   1e-21
ref|XP_002867251.1| ATP synthase family [Arabidopsis lyrata subs...   106   1e-20
ref|NP_194953.1| F-type H+-transporting ATPase subunit b [Arabid...   105   2e-20

>ref|XP_003603370.1| ATP synthase [Medicago truncatula] gi|355492418|gb|AES73621.1| ATP
           synthase [Medicago truncatula]
           gi|388517653|gb|AFK46888.1| unknown [Medicago
           truncatula]
          Length = 209

 Score =  113 bits (282), Expect = 1e-22
 Identities = 58/63 (92%), Positives = 62/63 (98%)
 Frame = -2

Query: 484 ALNKMKKETQLEVEEKIAEGRKKVDAELQEALANLERQKEETIKSLDSQIAALSQDIVNK 305
           ALN+MKKETQ EVEEKIAEGRKKVDAELQEALANLE+QKEET+K+LDSQIAALSQDIVNK
Sbjct: 144 ALNQMKKETQAEVEEKIAEGRKKVDAELQEALANLEKQKEETVKALDSQIAALSQDIVNK 203

Query: 304 VLP 296
           VLP
Sbjct: 204 VLP 206



 Score = 80.9 bits (198), Expect = 6e-13
 Identities = 40/49 (81%), Positives = 42/49 (85%)
 Frame = -1

Query: 758 EKAALFDFNLTLPIIMAEFLVLMVALDKVYFTPLGKFMDERDAAIREKL 612
           EKAALFDFNLTLPII+ EFL LM ALDK+YFTPLG FMD RDA IR KL
Sbjct: 65  EKAALFDFNLTLPIIVVEFLFLMFALDKLYFTPLGTFMDNRDAEIRGKL 113


>ref|XP_003526371.1| PREDICTED: ATP synthase subunit b', chloroplastic-like [Glycine
           max]
          Length = 201

 Score =  109 bits (272), Expect = 1e-21
 Identities = 58/65 (89%), Positives = 61/65 (93%)
 Frame = -2

Query: 487 AALNKMKKETQLEVEEKIAEGRKKVDAELQEALANLERQKEETIKSLDSQIAALSQDIVN 308
           AALN MKKETQ EVE+KIAEGRKKV+AELQEALA LE QKEETIKSLDSQIAALSQ+IVN
Sbjct: 136 AALNTMKKETQAEVEQKIAEGRKKVEAELQEALAALENQKEETIKSLDSQIAALSQEIVN 195

Query: 307 KVLPT 293
           KVLPT
Sbjct: 196 KVLPT 200



 Score = 96.3 bits (238), Expect = 1e-17
 Identities = 47/51 (92%), Positives = 50/51 (98%)
 Frame = -1

Query: 764 EIEKAALFDFNLTLPIIMAEFLVLMVALDKVYFTPLGKFMDERDAAIREKL 612
           EIEKAALFDFNLTLPIIM EFL+LMVALDK++FTPLGKFMDERDAAIREKL
Sbjct: 70  EIEKAALFDFNLTLPIIMVEFLLLMVALDKIWFTPLGKFMDERDAAIREKL 120


>ref|NP_001237239.1| uncharacterized protein LOC100527009 [Glycine max]
           gi|255631358|gb|ACU16046.1| unknown [Glycine max]
          Length = 215

 Score =  109 bits (272), Expect = 1e-21
 Identities = 57/65 (87%), Positives = 62/65 (95%)
 Frame = -2

Query: 487 AALNKMKKETQLEVEEKIAEGRKKVDAELQEALANLERQKEETIKSLDSQIAALSQDIVN 308
           AALN MKKETQ EVE+KIAEGRKKV+AELQEAL++LE QKEETIKSLDSQIAALSQ+IVN
Sbjct: 150 AALNTMKKETQAEVEQKIAEGRKKVEAELQEALSSLENQKEETIKSLDSQIAALSQEIVN 209

Query: 307 KVLPT 293
           KVLPT
Sbjct: 210 KVLPT 214



 Score = 94.7 bits (234), Expect = 4e-17
 Identities = 46/51 (90%), Positives = 49/51 (96%)
 Frame = -1

Query: 764 EIEKAALFDFNLTLPIIMAEFLVLMVALDKVYFTPLGKFMDERDAAIREKL 612
           E EKAALFDFNLTLPIIM EFL+LMVALDK++FTPLGKFMDERDAAIREKL
Sbjct: 70  EFEKAALFDFNLTLPIIMVEFLLLMVALDKIWFTPLGKFMDERDAAIREKL 120


>ref|XP_002867251.1| ATP synthase family [Arabidopsis lyrata subsp. lyrata]
           gi|297313087|gb|EFH43510.1| ATP synthase family
           [Arabidopsis lyrata subsp. lyrata]
          Length = 219

 Score =  106 bits (265), Expect = 1e-20
 Identities = 54/65 (83%), Positives = 63/65 (96%)
 Frame = -2

Query: 487 AALNKMKKETQLEVEEKIAEGRKKVDAELQEALANLERQKEETIKSLDSQIAALSQDIVN 308
           AALNKMKKETQ+EVEEK+AEGRKKV+ EL+EALA+LE+QKEETIK+LDSQIAALS+DIV 
Sbjct: 155 AALNKMKKETQVEVEEKLAEGRKKVEEELKEALASLEKQKEETIKALDSQIAALSEDIVK 214

Query: 307 KVLPT 293
           KVLP+
Sbjct: 215 KVLPS 219



 Score = 81.3 bits (199), Expect = 4e-13
 Identities = 38/50 (76%), Positives = 45/50 (90%)
 Frame = -1

Query: 761 IEKAALFDFNLTLPIIMAEFLVLMVALDKVYFTPLGKFMDERDAAIREKL 612
           +EKA LFDFNLTLPII+ EFL LM ALDKVY++PLG FMD+RDA+I+EKL
Sbjct: 76  MEKAQLFDFNLTLPIIVVEFLFLMFALDKVYYSPLGNFMDQRDASIKEKL 125


>ref|NP_194953.1| F-type H+-transporting ATPase subunit b [Arabidopsis thaliana]
           gi|2864617|emb|CAA16964.1| H+-transporting ATP synthase
           chain9 - like protein [Arabidopsis thaliana]
           gi|5730141|emb|CAB52473.1| ATP synthase beta chain
           precursor (subunit II) [Arabidopsis thaliana]
           gi|7270130|emb|CAB79944.1| H+-transporting ATP synthase
           chain 9-like protein [Arabidopsis thaliana]
           gi|16604406|gb|AAL24209.1| AT4g32260/F10M6_100
           [Arabidopsis thaliana] gi|21554175|gb|AAM63254.1|
           H+-transporting ATP synthase chain 9-like protein
           [Arabidopsis thaliana] gi|332660627|gb|AEE86027.1|
           F-type H+-transporting ATPase subunit b [Arabidopsis
           thaliana]
          Length = 219

 Score =  105 bits (262), Expect = 2e-20
 Identities = 54/65 (83%), Positives = 62/65 (95%)
 Frame = -2

Query: 487 AALNKMKKETQLEVEEKIAEGRKKVDAELQEALANLERQKEETIKSLDSQIAALSQDIVN 308
           AALNKMKKETQ+EVEEK+AEGRKKV+ EL+EALA+LE QKEETIK+LDSQIAALS+DIV 
Sbjct: 155 AALNKMKKETQVEVEEKLAEGRKKVEEELKEALASLESQKEETIKALDSQIAALSEDIVK 214

Query: 307 KVLPT 293
           KVLP+
Sbjct: 215 KVLPS 219



 Score = 81.3 bits (199), Expect = 4e-13
 Identities = 38/50 (76%), Positives = 45/50 (90%)
 Frame = -1

Query: 761 IEKAALFDFNLTLPIIMAEFLVLMVALDKVYFTPLGKFMDERDAAIREKL 612
           +EKA LFDFNLTLPII+ EFL LM ALDKVY++PLG FMD+RDA+I+EKL
Sbjct: 76  MEKAQLFDFNLTLPIIVVEFLFLMFALDKVYYSPLGNFMDQRDASIKEKL 125


Top