BLASTX nr result

ID: Glycyrrhiza24_contig00000008 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza24_contig00000008
         (1215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514741.1| chlorophyll A/B binding protein, putative [R...   456   e-126
gb|AFK37078.1| unknown [Lotus japonicus]                              455   e-125
gb|ACJ85068.1| unknown [Medicago truncatula] gi|388507876|gb|AFK...   454   e-125
ref|XP_002284856.1| PREDICTED: chlorophyll a-b binding protein 4...   449   e-124
ref|XP_003527087.1| PREDICTED: chlorophyll a-b binding protein P...   447   e-123

>ref|XP_002514741.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223546345|gb|EEF47847.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 251

 Score =  456 bits (1172), Expect = e-126
 Identities = 221/254 (87%), Positives = 236/254 (92%)
 Frame = +1

Query: 154 LLNMATHASATLSRPCASKSRFLTGSSTKLNREVAVSVRPMGSPSFTSFKVHAKKGEWLP 333
           +  + T ASA + RPCASKSRFL+GS +KLNREVA   +PM S S  SFKV AKKGEWLP
Sbjct: 1   MATVTTQASAAVFRPCASKSRFLSGSPSKLNREVAF--KPMSS-SPASFKVEAKKGEWLP 57

Query: 334 GLASPSYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKM 513
           GL SP+YLNGSLPGDNGFDPLGLAEDPENL+WFVQAELVNGRWAMLGVAGMLLPEVFTK+
Sbjct: 58  GLPSPAYLNGSLPGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTKI 117

Query: 514 GVLNVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP 693
           G++NVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP
Sbjct: 118 GIINVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP 177

Query: 694 PNEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFLVQHNVTGKGPFDNLLQHLS 873
           PNEVGYPGGIFNPLNFAPTLEAKEKE+ANGRLAMLAFLGF++QHNVTGKGPFDNLLQHLS
Sbjct: 178 PNEVGYPGGIFNPLNFAPTLEAKEKELANGRLAMLAFLGFVIQHNVTGKGPFDNLLQHLS 237

Query: 874 DPWHSTIIQTLS*N 915
           DPWH+TIIQT S N
Sbjct: 238 DPWHNTIIQTFSGN 251


>gb|AFK37078.1| unknown [Lotus japonicus]
          Length = 252

 Score =  455 bits (1170), Expect = e-125
 Identities = 219/254 (86%), Positives = 233/254 (91%)
 Frame = +1

Query: 154 LLNMATHASATLSRPCASKSRFLTGSSTKLNREVAVSVRPMGSPSFTSFKVHAKKGEWLP 333
           +  + T ASA + RPCAS+SRFLTGSS KLNREVA   RPMG P  TSFKV AKKGEWLP
Sbjct: 1   MATVTTQASAAIFRPCASRSRFLTGSSGKLNREVAF--RPMGCPPSTSFKVEAKKGEWLP 58

Query: 334 GLASPSYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKM 513
           GLASP+YLNGSLPGDNGFDPL LAEDPENL+WFVQAELVNGRWA LGVAGMLLPEV T +
Sbjct: 59  GLASPNYLNGSLPGDNGFDPLALAEDPENLKWFVQAELVNGRWATLGVAGMLLPEVLTNI 118

Query: 514 GVLNVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP 693
           G++NVPKWYDAGK EYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP
Sbjct: 119 GLINVPKWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP 178

Query: 694 PNEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFLVQHNVTGKGPFDNLLQHLS 873
           PNEVGYPGGIFNPLNFAPT EAKE+E+ANGRLAMLAFLGF+VQHNVTGKGPFDNLLQHLS
Sbjct: 179 PNEVGYPGGIFNPLNFAPTEEAKERELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHLS 238

Query: 874 DPWHSTIIQTLS*N 915
           DPWH+TI+QTLS N
Sbjct: 239 DPWHNTIVQTLSGN 252


>gb|ACJ85068.1| unknown [Medicago truncatula] gi|388507876|gb|AFK42004.1| unknown
           [Medicago truncatula]
          Length = 253

 Score =  454 bits (1168), Expect = e-125
 Identities = 218/252 (86%), Positives = 230/252 (91%)
 Frame = +1

Query: 154 LLNMATHASATLSRPCASKSRFLTGSSTKLNREVAVSVRPMGSPSFTSFKVHAKKGEWLP 333
           +  + T ASA + RPC  KSRFLTGSS KLNREVA+  RPMG     SFKV AKKGEWLP
Sbjct: 1   MATVTTQASAAIFRPCGLKSRFLTGSSGKLNREVAI--RPMGCSPSASFKVEAKKGEWLP 58

Query: 334 GLASPSYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKM 513
           GLASP YL GSLPGDNGFDPLGLAEDPENL+WFVQAELVNGRWAMLGVAGMLLPEVFT +
Sbjct: 59  GLASPGYLTGSLPGDNGFDPLGLAEDPENLKWFVQAELVNGRWAMLGVAGMLLPEVFTNI 118

Query: 514 GVLNVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP 693
           G++NVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP
Sbjct: 119 GIINVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP 178

Query: 694 PNEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFLVQHNVTGKGPFDNLLQHLS 873
             EVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGF++QHNVTGKGPFDNLLQHLS
Sbjct: 179 KGEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFIIQHNVTGKGPFDNLLQHLS 238

Query: 874 DPWHSTIIQTLS 909
           DPWH+TI+QTLS
Sbjct: 239 DPWHNTIVQTLS 250


>ref|XP_002284856.1| PREDICTED: chlorophyll a-b binding protein 4, chloroplastic [Vitis
           vinifera] gi|147843386|emb|CAN79984.1| hypothetical
           protein VITISV_038035 [Vitis vinifera]
          Length = 252

 Score =  449 bits (1155), Expect = e-124
 Identities = 215/251 (85%), Positives = 232/251 (92%)
 Frame = +1

Query: 154 LLNMATHASATLSRPCASKSRFLTGSSTKLNREVAVSVRPMGSPSFTSFKVHAKKGEWLP 333
           +  + T ASA + RPCASKSRFLTGSS KL REV  SV+PM S S+ SFKV AKKGEWLP
Sbjct: 1   MATVTTQASAAVFRPCASKSRFLTGSSGKLGREV--SVKPMTSSSYRSFKVEAKKGEWLP 58

Query: 334 GLASPSYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKM 513
           GL+SPSYL+GSLPGDNGFDPLGLAEDPENL+W+VQAELVN RWAMLGVAGMLLPEVFTK+
Sbjct: 59  GLSSPSYLDGSLPGDNGFDPLGLAEDPENLKWYVQAELVNSRWAMLGVAGMLLPEVFTKI 118

Query: 514 GVLNVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP 693
           G++N P+WYDAGK EYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFK YSLP
Sbjct: 119 GIINAPQWYDAGKAEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKNYSLP 178

Query: 694 PNEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFLVQHNVTGKGPFDNLLQHLS 873
           PNEVGYPGGIFNPLNFAPT EAKEKE+ANGRLAMLAFLGF+VQHNVTGKGPFDNLLQH+S
Sbjct: 179 PNEVGYPGGIFNPLNFAPTEEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFDNLLQHIS 238

Query: 874 DPWHSTIIQTL 906
           DPWH+TIIQTL
Sbjct: 239 DPWHNTIIQTL 249


>ref|XP_003527087.1| PREDICTED: chlorophyll a-b binding protein P4, chloroplastic-like
           [Glycine max]
          Length = 252

 Score =  447 bits (1151), Expect = e-123
 Identities = 212/251 (84%), Positives = 231/251 (92%)
 Frame = +1

Query: 154 LLNMATHASATLSRPCASKSRFLTGSSTKLNREVAVSVRPMGSPSFTSFKVHAKKGEWLP 333
           +  + T ASA + RPCASKSRFLTGSS KLNREV  ++RPMG P   SFKV AKKGEWLP
Sbjct: 1   MATVTTQASAAIFRPCASKSRFLTGSSGKLNREV--TMRPMGCPPSASFKVEAKKGEWLP 58

Query: 334 GLASPSYLNGSLPGDNGFDPLGLAEDPENLRWFVQAELVNGRWAMLGVAGMLLPEVFTKM 513
           GLASP+YLNG+LPGDNGFDPLGLAEDPENLRW+VQAELVNGRWAMLGVAGMLLPEVFTK+
Sbjct: 59  GLASPTYLNGTLPGDNGFDPLGLAEDPENLRWYVQAELVNGRWAMLGVAGMLLPEVFTKI 118

Query: 514 GVLNVPKWYDAGKEEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP 693
           G++N P+WYDAGK EYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP
Sbjct: 119 GIINAPQWYDAGKSEYFASSSTLFVIEFILFHYVEIRRWQDIKNPGSVNQDPIFKQYSLP 178

Query: 694 PNEVGYPGGIFNPLNFAPTLEAKEKEIANGRLAMLAFLGFLVQHNVTGKGPFDNLLQHLS 873
            +E GYPG +FNPLNFAPTLEAKEKE+ANGRLAMLAFLGF+VQHNVTGKGPF+NLLQHLS
Sbjct: 179 QHECGYPGSVFNPLNFAPTLEAKEKELANGRLAMLAFLGFIVQHNVTGKGPFENLLQHLS 238

Query: 874 DPWHSTIIQTL 906
           DPWH+TII T+
Sbjct: 239 DPWHNTIINTI 249


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