BLASTX nr result

ID: Glycyrrhiza23_contig00035118 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00035118
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003606227.1| DNA polymerase epsilon catalytic subunit A [...   238   4e-61
ref|XP_003538511.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymera...   234   7e-60
ref|XP_003540789.1| PREDICTED: DNA polymerase epsilon catalytic ...   230   1e-58
ref|XP_004160105.1| PREDICTED: DNA polymerase epsilon catalytic ...   191   5e-47
ref|XP_004145799.1| PREDICTED: DNA polymerase epsilon catalytic ...   191   5e-47

>ref|XP_003606227.1| DNA polymerase epsilon catalytic subunit A [Medicago truncatula]
            gi|355507282|gb|AES88424.1| DNA polymerase epsilon
            catalytic subunit A [Medicago truncatula]
          Length = 2248

 Score =  238 bits (607), Expect = 4e-61
 Identities = 113/119 (94%), Positives = 117/119 (98%)
 Frame = +1

Query: 1    LFEWIELEPLQFWCSLLFMDQYNYGGIPAKSDEAMNDESQVDIISSWNIAEYLPKKIQDH 180
            LFEWIELEPLQFWCSLLFMDQYNYGGIPAKSDEAMNDESQVDIISSWNIAEYLPKKIQDH
Sbjct: 1906 LFEWIELEPLQFWCSLLFMDQYNYGGIPAKSDEAMNDESQVDIISSWNIAEYLPKKIQDH 1965

Query: 181  FVFIVSQFMYIPWNYAQKQAAIRASLQNGDSCTPSINIGAAEAFESEMTEYIKGQISSY 357
            +VFIVSQFMYIPWNY +KQAAIRAS+QNGDSCTPSINIGAAEAFESE+TEYIK QISSY
Sbjct: 1966 YVFIVSQFMYIPWNYTRKQAAIRASVQNGDSCTPSINIGAAEAFESEITEYIKEQISSY 2024


>ref|XP_003538511.1| PREDICTED: LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic
            subunit A-like [Glycine max]
          Length = 2205

 Score =  234 bits (596), Expect = 7e-60
 Identities = 110/119 (92%), Positives = 115/119 (96%)
 Frame = +1

Query: 1    LFEWIELEPLQFWCSLLFMDQYNYGGIPAKSDEAMNDESQVDIISSWNIAEYLPKKIQDH 180
            LFEW+ELEPLQFWCSLLFMDQYNYGGIP KSDEA+NDESQVDIISSWNIAEYLPKKIQDH
Sbjct: 1866 LFEWVELEPLQFWCSLLFMDQYNYGGIPTKSDEALNDESQVDIISSWNIAEYLPKKIQDH 1925

Query: 181  FVFIVSQFMYIPWNYAQKQAAIRASLQNGDSCTPSINIGAAEAFESEMTEYIKGQISSY 357
            FVFIVSQFMYIPWNYA+KQA IRASLQNGDSCTPSINIGAAEAFESE+TE+ K QISSY
Sbjct: 1926 FVFIVSQFMYIPWNYAKKQAQIRASLQNGDSCTPSINIGAAEAFESEVTEFTKDQISSY 1984


>ref|XP_003540789.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Glycine
            max]
          Length = 2207

 Score =  230 bits (586), Expect = 1e-58
 Identities = 109/119 (91%), Positives = 114/119 (95%)
 Frame = +1

Query: 1    LFEWIELEPLQFWCSLLFMDQYNYGGIPAKSDEAMNDESQVDIISSWNIAEYLPKKIQDH 180
            LFEWIELEPLQFWCSLLFMDQYNYGGIP KSDEA+N+ESQVDIISSWNIAEYLPKKIQDH
Sbjct: 1868 LFEWIELEPLQFWCSLLFMDQYNYGGIPTKSDEAVNNESQVDIISSWNIAEYLPKKIQDH 1927

Query: 181  FVFIVSQFMYIPWNYAQKQAAIRASLQNGDSCTPSINIGAAEAFESEMTEYIKGQISSY 357
            FVFIVSQFMYIPWNYA+KQA IRASLQNGDSCTPSINIGAAEAFESE+TE+ K QI SY
Sbjct: 1928 FVFIVSQFMYIPWNYAKKQAQIRASLQNGDSCTPSINIGAAEAFESEITEFTKEQIGSY 1986


>ref|XP_004160105.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like, partial
            [Cucumis sativus]
          Length = 2051

 Score =  191 bits (485), Expect = 5e-47
 Identities = 89/119 (74%), Positives = 105/119 (88%)
 Frame = +1

Query: 1    LFEWIELEPLQFWCSLLFMDQYNYGGIPAKSDEAMNDESQVDIISSWNIAEYLPKKIQDH 180
            LFEWIELEPLQFW SLLFMD+YNYGGI AK DE+ + ESQVDI+++WNIAEYLPKKIQDH
Sbjct: 1870 LFEWIELEPLQFWQSLLFMDKYNYGGIRAKDDESTDVESQVDIVANWNIAEYLPKKIQDH 1929

Query: 181  FVFIVSQFMYIPWNYAQKQAAIRASLQNGDSCTPSINIGAAEAFESEMTEYIKGQISSY 357
            F FI+SQF+YIPW+YA KQAA RASLQ  D+CTPSI + AAE+FES +TE++K Q+SSY
Sbjct: 1930 FDFIISQFLYIPWDYATKQAAARASLQRDDTCTPSITVLAAESFESHVTEHLKEQLSSY 1988


>ref|XP_004145799.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like [Cucumis
            sativus]
          Length = 2206

 Score =  191 bits (485), Expect = 5e-47
 Identities = 89/119 (74%), Positives = 105/119 (88%)
 Frame = +1

Query: 1    LFEWIELEPLQFWCSLLFMDQYNYGGIPAKSDEAMNDESQVDIISSWNIAEYLPKKIQDH 180
            LFEWIELEPLQFW SLLFMD+YNYGGI AK DE+ + ESQVDI+++WNIAEYLPKKIQDH
Sbjct: 1870 LFEWIELEPLQFWQSLLFMDKYNYGGIRAKDDESTDVESQVDIVANWNIAEYLPKKIQDH 1929

Query: 181  FVFIVSQFMYIPWNYAQKQAAIRASLQNGDSCTPSINIGAAEAFESEMTEYIKGQISSY 357
            F FI+SQF+YIPW+YA KQAA RASLQ  D+CTPSI + AAE+FES +TE++K Q+SSY
Sbjct: 1930 FDFIISQFLYIPWDYATKQAAARASLQRDDTCTPSITVLAAESFESHVTEHLKEQLSSY 1988


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