BLASTX nr result

ID: Glycyrrhiza23_contig00035113 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00035113
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555510.1| PREDICTED: RING-H2 finger protein ATL16-like...   116   2e-24
ref|XP_003535440.1| PREDICTED: RING-H2 finger protein ATL16-like...   112   2e-23
ref|XP_003536846.1| PREDICTED: RING-H2 finger protein ATL1-like ...   100   1e-19
ref|XP_003555162.1| PREDICTED: RING-H2 finger protein ATL1-like ...    91   8e-17
emb|CAN69298.1| hypothetical protein VITISV_043412 [Vitis vinifera]    90   2e-16

>ref|XP_003555510.1| PREDICTED: RING-H2 finger protein ATL16-like [Glycine max]
          Length = 364

 Score =  116 bits (290), Expect = 2e-24
 Identities = 62/84 (73%), Positives = 67/84 (79%)
 Frame = -2

Query: 254 DLLRRFSPSRRREDPSATYSQGTEPRGLDEALIRLIPVIQYKAVTEGNNNRDSGGGERSS 75
           D+LRRFSPSRRREDP  TYS GT+ RGLDEALIRLIPVIQYKA     +NRD    E   
Sbjct: 79  DVLRRFSPSRRREDPPPTYSPGTDTRGLDEALIRLIPVIQYKA---QGDNRDL---EERR 132

Query: 74  FSCECAVCLNEFQQDEKLRMIPNC 3
           F CECAVCLNEFQ+DEKLR+IPNC
Sbjct: 133 F-CECAVCLNEFQEDEKLRIIPNC 155


>ref|XP_003535440.1| PREDICTED: RING-H2 finger protein ATL16-like [Glycine max]
          Length = 367

 Score =  112 bits (281), Expect = 2e-23
 Identities = 60/84 (71%), Positives = 67/84 (79%)
 Frame = -2

Query: 254 DLLRRFSPSRRREDPSATYSQGTEPRGLDEALIRLIPVIQYKAVTEGNNNRDSGGGERSS 75
           D+LRRFSPSRRREDP  TYS  T+ RGLDEALIRLIPV QYKA  +  ++RD   GER  
Sbjct: 79  DVLRRFSPSRRREDPPPTYSPATDTRGLDEALIRLIPVTQYKA--QQGDDRDF--GERR- 133

Query: 74  FSCECAVCLNEFQQDEKLRMIPNC 3
             CECAVCLNEFQ+DEKLR+IPNC
Sbjct: 134 -FCECAVCLNEFQEDEKLRVIPNC 156


>ref|XP_003536846.1| PREDICTED: RING-H2 finger protein ATL1-like [Glycine max]
          Length = 340

 Score =  100 bits (250), Expect = 1e-19
 Identities = 54/84 (64%), Positives = 63/84 (75%)
 Frame = -2

Query: 254 DLLRRFSPSRRREDPSATYSQGTEPRGLDEALIRLIPVIQYKAVTEGNNNRDSGGGERSS 75
           D +R FS SR  EDPSA YS  +EPRGL+EA+I+LIPVIQYK   EGN       GERS 
Sbjct: 59  DHVRIFSLSRLHEDPSAPYSTASEPRGLEEAVIKLIPVIQYKP-EEGNTE----FGERSL 113

Query: 74  FSCECAVCLNEFQQDEKLRMIPNC 3
            S EC+VCL+EF+QDEKLR+IPNC
Sbjct: 114 ISSECSVCLSEFEQDEKLRVIPNC 137


>ref|XP_003555162.1| PREDICTED: RING-H2 finger protein ATL1-like [Glycine max]
          Length = 352

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 52/84 (61%), Positives = 61/84 (72%)
 Frame = -2

Query: 254 DLLRRFSPSRRREDPSATYSQGTEPRGLDEALIRLIPVIQYKAVTEGNNNRDSGGGERSS 75
           D +R FS SR  EDPSA YS  +EPRGL+EA+I+LIPVIQ+K             GER S
Sbjct: 70  DHVRIFSLSRSHEDPSAPYSTASEPRGLEEAVIKLIPVIQFKPEE----------GER-S 118

Query: 74  FSCECAVCLNEFQQDEKLRMIPNC 3
           FS EC+VCL+EFQQDEKLR+IPNC
Sbjct: 119 FS-ECSVCLSEFQQDEKLRVIPNC 141


>emb|CAN69298.1| hypothetical protein VITISV_043412 [Vitis vinifera]
          Length = 419

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 52/89 (58%), Positives = 59/89 (66%), Gaps = 5/89 (5%)
 Frame = -2

Query: 254 DLLRRFS--PSRRREDPSATYSQGTEPRGLDEALIRLIPVIQYKAVTEGNNNRDSGG--- 90
           DLLRRFS   SR REDP   YS   E RGLDE++IR IP+ Q+         R  GG   
Sbjct: 140 DLLRRFSFSRSRHREDPLMVYSPAIESRGLDESVIRSIPIFQF---------RKGGGREF 190

Query: 89  GERSSFSCECAVCLNEFQQDEKLRMIPNC 3
           GERS   CECAVCLNEFQ++EKLR+IPNC
Sbjct: 191 GERSH--CECAVCLNEFQEEEKLRIIPNC 217


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