BLASTX nr result

ID: Glycyrrhiza23_contig00035095 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00035095
         (312 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532629.1| PREDICTED: pentatricopeptide repeat-containi...   189   3e-46
ref|XP_003524089.1| PREDICTED: pentatricopeptide repeat-containi...   184   6e-45
ref|XP_003637117.1| Pentatricopeptide repeat-containing protein,...   171   4e-41
ref|XP_002312939.1| predicted protein [Populus trichocarpa] gi|2...   167   1e-39
emb|CBI37820.3| unnamed protein product [Vitis vinifera]              163   1e-38

>ref|XP_003532629.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like [Glycine max]
          Length = 647

 Score =  189 bits (479), Expect = 3e-46
 Identities = 93/102 (91%), Positives = 97/102 (95%)
 Frame = +3

Query: 3   ERPDRHTLSSVLSVCTGLVDLYLGKQIHQLVTKTVIPDIPINNSLITMYSRCGAIVDACT 182
           ERPDRHTLSSV+SVCTGLV+LYLGKQIHQLVTK VIPD PINNSLITMYSRCGAIVDACT
Sbjct: 399 ERPDRHTLSSVMSVCTGLVNLYLGKQIHQLVTKIVIPDSPINNSLITMYSRCGAIVDACT 458

Query: 183 VFNEMKLDKDVITWNAMIGGYASHGLAAEALDLFKLMKTFKI 308
           VFNE+KL KDVITWNAMIGGYASHGLAAEAL+LFKLMK  KI
Sbjct: 459 VFNEIKLYKDVITWNAMIGGYASHGLAAEALELFKLMKRLKI 500


>ref|XP_003524089.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62260,
           mitochondrial-like [Glycine max]
          Length = 649

 Score =  184 bits (467), Expect = 6e-45
 Identities = 90/102 (88%), Positives = 96/102 (94%)
 Frame = +3

Query: 3   ERPDRHTLSSVLSVCTGLVDLYLGKQIHQLVTKTVIPDIPINNSLITMYSRCGAIVDACT 182
           ERPD+HTLSSV+SV TGLVDLYLGKQ+HQLVTKTV+PD PINNSLITMYSRCGAIVDACT
Sbjct: 401 ERPDKHTLSSVISVSTGLVDLYLGKQLHQLVTKTVLPDSPINNSLITMYSRCGAIVDACT 460

Query: 183 VFNEMKLDKDVITWNAMIGGYASHGLAAEALDLFKLMKTFKI 308
           VFNE+KL KDVITWNAMIGGYASHG AAEAL+LFKLMK  KI
Sbjct: 461 VFNEIKLYKDVITWNAMIGGYASHGSAAEALELFKLMKRLKI 502


>ref|XP_003637117.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula] gi|355503052|gb|AES84255.1|
           Pentatricopeptide repeat-containing protein, partial
           [Medicago truncatula]
          Length = 592

 Score =  171 bits (434), Expect = 4e-41
 Identities = 85/103 (82%), Positives = 91/103 (88%)
 Frame = +3

Query: 3   ERPDRHTLSSVLSVCTGLVDLYLGKQIHQLVTKTVIPDIPINNSLITMYSRCGAIVDACT 182
           ERPDRHTLSS+LSV TGLVDLYLGKQIHQ VTKTV+PD+PINNSLITMYSRCG I DA  
Sbjct: 401 ERPDRHTLSSILSVSTGLVDLYLGKQIHQFVTKTVVPDLPINNSLITMYSRCGEIGDARH 460

Query: 183 VFNEMKLDKDVITWNAMIGGYASHGLAAEALDLFKLMKTFKIQ 311
           VFNEMKL KDVITWNAMIGGYA HG AA+AL+LF+ MK  KIQ
Sbjct: 461 VFNEMKLYKDVITWNAMIGGYAFHGFAAQALELFERMKGLKIQ 503


>ref|XP_002312939.1| predicted protein [Populus trichocarpa] gi|222849347|gb|EEE86894.1|
           predicted protein [Populus trichocarpa]
          Length = 610

 Score =  167 bits (422), Expect = 1e-39
 Identities = 78/103 (75%), Positives = 94/103 (91%)
 Frame = +3

Query: 3   ERPDRHTLSSVLSVCTGLVDLYLGKQIHQLVTKTVIPDIPINNSLITMYSRCGAIVDACT 182
           E+PDRHTLSSVLSV  G+VDL LG QIHQLVTKTVIPD+PINN+LITMYSRCGAI++A T
Sbjct: 360 EKPDRHTLSSVLSVSAGIVDLQLGMQIHQLVTKTVIPDVPINNALITMYSRCGAIIEAGT 419

Query: 183 VFNEMKLDKDVITWNAMIGGYASHGLAAEALDLFKLMKTFKIQ 311
           +F+E+KL K+VI+WNAMIGGYASHG A EAL++FKLMK+F ++
Sbjct: 420 IFDEVKLQKEVISWNAMIGGYASHGYAVEALEVFKLMKSFDVR 462


>emb|CBI37820.3| unnamed protein product [Vitis vinifera]
          Length = 504

 Score =  163 bits (413), Expect = 1e-38
 Identities = 77/103 (74%), Positives = 92/103 (89%)
 Frame = +3

Query: 3   ERPDRHTLSSVLSVCTGLVDLYLGKQIHQLVTKTVIPDIPINNSLITMYSRCGAIVDACT 182
           E+PDRHTLSSVLSVC+G   L+LG QIHQ +TKTVIPDIPINNSLITMYSRCGAIV+A T
Sbjct: 251 EKPDRHTLSSVLSVCSGFAALHLGMQIHQQITKTVIPDIPINNSLITMYSRCGAIVEART 310

Query: 183 VFNEMKLDKDVITWNAMIGGYASHGLAAEALDLFKLMKTFKIQ 311
           +F+E+KL K+VI+WNAMIGGYA HG AA+AL+LF+LMK  K++
Sbjct: 311 IFDEVKLQKEVISWNAMIGGYAFHGFAADALELFELMKRLKVR 353


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