BLASTX nr result

ID: Glycyrrhiza23_contig00035085 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00035085
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526645.1| PREDICTED: metal transporter Nramp5-like [Gl...   108   6e-22
ref|XP_003602055.1| Metal transporter [Medicago truncatula] gi|3...   105   5e-21
ref|XP_002307454.1| nramp transporter [Populus trichocarpa] gi|2...   103   1e-20
ref|XP_002307453.1| nramp transporter [Populus trichocarpa] gi|2...   103   1e-20
ref|XP_002520333.1| metal transporter, putative [Ricinus communi...   102   2e-20

>ref|XP_003526645.1| PREDICTED: metal transporter Nramp5-like [Glycine max]
          Length = 544

 Score =  108 bits (269), Expect = 6e-22
 Identities = 47/63 (74%), Positives = 57/63 (90%)
 Frame = +2

Query: 53  NVASSSDYHGSSNQEKPGWRKFLPYVGPGFLVSLAYLDPGNMETDLQAGANHRYELLWLV 232
           N+++ S +  SSN +KPGW+KFL YVGPGFLVSLAYLDPGNMETDLQAGA+H+YELLW++
Sbjct: 29  NLSTPSHHDASSNHQKPGWKKFLSYVGPGFLVSLAYLDPGNMETDLQAGADHKYELLWVI 88

Query: 233 LIG 241
           LIG
Sbjct: 89  LIG 91


>ref|XP_003602055.1| Metal transporter [Medicago truncatula]
           gi|357520337|ref|XP_003630457.1| Metal transporter
           [Medicago truncatula] gi|355491103|gb|AES72306.1| Metal
           transporter [Medicago truncatula]
           gi|355524479|gb|AET04933.1| Metal transporter [Medicago
           truncatula]
          Length = 542

 Score =  105 bits (261), Expect = 5e-21
 Identities = 53/74 (71%), Positives = 59/74 (79%), Gaps = 5/74 (6%)
 Frame = +2

Query: 35  NRNTTVNVASSS----DYHGSSNQE-KPGWRKFLPYVGPGFLVSLAYLDPGNMETDLQAG 199
           NR   VNV  SS    ++  SS Q+ KPGW+KFL YVGPGFLVSLAYLDPGNMETDLQAG
Sbjct: 12  NRIVAVNVTPSSTPSYNHDDSSKQDQKPGWKKFLAYVGPGFLVSLAYLDPGNMETDLQAG 71

Query: 200 ANHRYELLWLVLIG 241
           ANH YELLW++LIG
Sbjct: 72  ANHGYELLWIILIG 85


>ref|XP_002307454.1| nramp transporter [Populus trichocarpa] gi|222856903|gb|EEE94450.1|
           nramp transporter [Populus trichocarpa]
          Length = 585

 Score =  103 bits (257), Expect = 1e-20
 Identities = 45/51 (88%), Positives = 49/51 (96%)
 Frame = +2

Query: 89  NQEKPGWRKFLPYVGPGFLVSLAYLDPGNMETDLQAGANHRYELLWLVLIG 241
           N +KPGWRKFL YVGPGFLVSLAYLDPGN+ETDLQAGANHRYELLW++LIG
Sbjct: 47  NHQKPGWRKFLSYVGPGFLVSLAYLDPGNLETDLQAGANHRYELLWVILIG 97


>ref|XP_002307453.1| nramp transporter [Populus trichocarpa] gi|222856902|gb|EEE94449.1|
           nramp transporter [Populus trichocarpa]
          Length = 518

 Score =  103 bits (257), Expect = 1e-20
 Identities = 45/51 (88%), Positives = 49/51 (96%)
 Frame = +2

Query: 89  NQEKPGWRKFLPYVGPGFLVSLAYLDPGNMETDLQAGANHRYELLWLVLIG 241
           N +KPGWRKFL YVGPGFLVSLAYLDPGN+ETDLQAGANHRYELLW++LIG
Sbjct: 48  NHQKPGWRKFLSYVGPGFLVSLAYLDPGNLETDLQAGANHRYELLWVILIG 98


>ref|XP_002520333.1| metal transporter, putative [Ricinus communis]
           gi|223540552|gb|EEF42119.1| metal transporter, putative
           [Ricinus communis]
          Length = 498

 Score =  102 bits (255), Expect = 2e-20
 Identities = 45/54 (83%), Positives = 51/54 (94%)
 Frame = +2

Query: 80  GSSNQEKPGWRKFLPYVGPGFLVSLAYLDPGNMETDLQAGANHRYELLWLVLIG 241
           G+++ EKPGWRKFL YVGPGFLVSLAYLDPGN+ETDLQAGANH YELLW++LIG
Sbjct: 42  GNTSPEKPGWRKFLSYVGPGFLVSLAYLDPGNLETDLQAGANHGYELLWVILIG 95


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