BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00035080
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containi...   147   1e-33
ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containi...   123   1e-26
emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]   123   1e-26
ref|XP_002305120.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25
ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   114   8e-24

>ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 858

 Score =  147 bits (370), Expect = 1e-33
 Identities = 73/111 (65%), Positives = 87/111 (78%)
 Frame = -3

Query: 336 DLFAEAVDLFKGMVDGEVRPNEFSLSIILNACAGLRDGGLARTVXXXXXXXXXXLDQFSA 157
           +L  EAV LFK MV   + PNEFS+SIILNACAGL++G L R +          LDQFSA
Sbjct: 162 ELCGEAVGLFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSA 221

Query: 156 NALVDMYAKAGGIEDAVSVFREIKHPDIVSWNAVIAGCVLHECNDLALILL 4
           NALVDMY+KAG IE AV+VF++I HPD+VSWNA+IAGCVLH+CNDLAL+LL
Sbjct: 222 NALVDMYSKAGEIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLL 272



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 39/97 (40%), Positives = 55/97 (56%)
 Frame = -3

Query: 324 EAVDLFKGMVDGEVRPNEFSLSIILNACAGLRDGGLARTVXXXXXXXXXXLDQFSANALV 145
           EA+ L+  M D +++P+ F  S +LNACA L      + +           D F++N+LV
Sbjct: 469 EALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFASNSLV 528

Query: 144 DMYAKAGGIEDAVSVFREIKHPDIVSWNAVIAGCVLH 34
           +MYAK G IEDA   F EI +  IVSW+A+I G   H
Sbjct: 529 NMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQH 565



 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 35/100 (35%), Positives = 50/100 (50%)
 Frame = -3

Query: 321 AVDLFKGMVDGEVRPNEFSLSIILNACAGLRDGGLARTVXXXXXXXXXXLDQFSANALVD 142
           A+ L   M     RPN F+LS  L ACA +    L R +           D F+A  LVD
Sbjct: 268 ALMLLDEMKGSGTRPNMFTLSSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVD 327

Query: 141 MYAKAGGIEDAVSVFREIKHPDIVSWNAVIAGCVLHECND 22
           MY+K   ++DA   +  +   DI++WNA+I+G    +C D
Sbjct: 328 MYSKCEMMDDARRAYDSMPKKDIIAWNALISG--YSQCGD 365



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 36/98 (36%), Positives = 51/98 (52%)
 Frame = -3

Query: 324 EAVDLFKGMVDGEVRPNEFSLSIILNACAGLRDGGLARTVXXXXXXXXXXLDQFSANALV 145
           EA+ +F  M    V+ NEF+   +L AC+  RD  + R V           D F AN LV
Sbjct: 65  EALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVANTLV 124

Query: 144 DMYAKAGGIEDAVSVFREIKHPDIVSWNAVIAGCVLHE 31
            MYAK G ++D+  +F  I   ++VSWNA+ +  V  E
Sbjct: 125 VMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSE 162


>ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 933

 Score =  123 bits (309), Expect = 1e-26
 Identities = 64/111 (57%), Positives = 75/111 (67%)
 Frame = -3

Query: 336 DLFAEAVDLFKGMVDGEVRPNEFSLSIILNACAGLRDGGLARTVXXXXXXXXXXLDQFSA 157
           D   EAV LF  MV   ++PNEFSLS ++NAC GLRD    + +           D FSA
Sbjct: 237 DFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSA 296

Query: 156 NALVDMYAKAGGIEDAVSVFREIKHPDIVSWNAVIAGCVLHECNDLALILL 4
           NALVDMYAK G + DA+SVF +IK PDIVSWNAVIAGCVLHE ++ AL LL
Sbjct: 297 NALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELL 347



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 40/97 (41%), Positives = 54/97 (55%)
 Frame = -3

Query: 324 EAVDLFKGMVDGEVRPNEFSLSIILNACAGLRDGGLARTVXXXXXXXXXXLDQFSANALV 145
           EA+ LF  M D E++P+ F  S +LNACA L      + +          LD F+ N+LV
Sbjct: 544 EALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLV 603

Query: 144 DMYAKAGGIEDAVSVFREIKHPDIVSWNAVIAGCVLH 34
           +MYAK G I+DA   F E+    IVSW+A+I G   H
Sbjct: 604 NMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQH 640



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 33/93 (35%), Positives = 49/93 (52%)
 Frame = -3

Query: 324 EAVDLFKGMVDGEVRPNEFSLSIILNACAGLRDGGLARTVXXXXXXXXXXLDQFSANALV 145
           +A++L   M    + PN F+LS  L ACAG+    L R +           D F +  LV
Sbjct: 342 QALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLV 401

Query: 144 DMYAKAGGIEDAVSVFREIKHPDIVSWNAVIAG 46
           DMY+K   +EDA   F  +   D+++WNA+I+G
Sbjct: 402 DMYSKCDLLEDARMAFNLLPEKDLIAWNAIISG 434


>emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score =  123 bits (309), Expect = 1e-26
 Identities = 64/111 (57%), Positives = 75/111 (67%)
 Frame = -3

Query: 336 DLFAEAVDLFKGMVDGEVRPNEFSLSIILNACAGLRDGGLARTVXXXXXXXXXXLDQFSA 157
           D   EAV LF  MV   ++PNEFSLS ++NAC GLRD    + +           D FSA
Sbjct: 237 DFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGYDWDPFSA 296

Query: 156 NALVDMYAKAGGIEDAVSVFREIKHPDIVSWNAVIAGCVLHECNDLALILL 4
           NALVDMYAK G + DA+SVF +IK PDIVSWNAVIAGCVLHE ++ AL LL
Sbjct: 297 NALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALELL 347



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 40/97 (41%), Positives = 54/97 (55%)
 Frame = -3

Query: 324 EAVDLFKGMVDGEVRPNEFSLSIILNACAGLRDGGLARTVXXXXXXXXXXLDQFSANALV 145
           EA+ LF  M D E++P+ F  S +LNACA L      + +          LD F+ N+LV
Sbjct: 517 EALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHVHILKYGFVLDIFAGNSLV 576

Query: 144 DMYAKAGGIEDAVSVFREIKHPDIVSWNAVIAGCVLH 34
           +MYAK G I+DA   F E+    IVSW+A+I G   H
Sbjct: 577 NMYAKCGSIDDAGRAFSELTERGIVSWSAMIGGLAQH 613


>ref|XP_002305120.1| predicted protein [Populus trichocarpa] gi|222848084|gb|EEE85631.1|
           predicted protein [Populus trichocarpa]
          Length = 786

 Score =  120 bits (300), Expect = 1e-25
 Identities = 64/111 (57%), Positives = 72/111 (64%)
 Frame = -3

Query: 336 DLFAEAVDLFKGMVDGEVRPNEFSLSIILNACAGLRDGGLARTVXXXXXXXXXXLDQFSA 157
           D+  EAV LF  MV   +RPNEFSLS ++N C GL D    R +           D FSA
Sbjct: 90  DMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSA 149

Query: 156 NALVDMYAKAGGIEDAVSVFREIKHPDIVSWNAVIAGCVLHECNDLALILL 4
           NALVDMYAK G +EDA SVF EI  PDIVSWNA+IAGCVLHE +  AL LL
Sbjct: 150 NALVDMYAKVGILEDASSVFDEIAKPDIVSWNAIIAGCVLHEYHHRALELL 200



 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 42/106 (39%), Positives = 54/106 (50%)
 Frame = -3

Query: 324 EAVDLFKGMVDGEVRPNEFSLSIILNACAGLRDGGLARTVXXXXXXXXXXLDQFSANALV 145
           EA+ L+  M D  ++P+ F  S +LNACA L      + V           D F+ N+LV
Sbjct: 397 EALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLV 456

Query: 144 DMYAKAGGIEDAVSVFREIKHPDIVSWNAVIAGCVLHECNDLALIL 7
           +MYAK G IEDA   F  I    IVSW+A+I G   H     AL L
Sbjct: 457 NMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQL 502



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 33/92 (35%), Positives = 50/92 (54%)
 Frame = -3

Query: 321 AVDLFKGMVDGEVRPNEFSLSIILNACAGLRDGGLARTVXXXXXXXXXXLDQFSANALVD 142
           A++L + M    + PN F+LS  L ACAG+    L R +           D F    L+D
Sbjct: 196 ALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGLID 255

Query: 141 MYAKAGGIEDAVSVFREIKHPDIVSWNAVIAG 46
           MY+K   ++DA  VF+ +   D+++WNAVI+G
Sbjct: 256 MYSKCNSMDDARLVFKLMPERDMIAWNAVISG 287



 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 32/84 (38%), Positives = 46/84 (54%)
 Frame = -3

Query: 285 VRPNEFSLSIILNACAGLRDGGLARTVXXXXXXXXXXLDQFSANALVDMYAKAGGIEDAV 106
           ++ NEF+   +L AC   +D  L + V           D+F AN+LV +YAK GG  DA 
Sbjct: 6   IKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDAR 65

Query: 105 SVFREIKHPDIVSWNAVIAGCVLH 34
           S+F  I    +VSWNA+ + C +H
Sbjct: 66  SLFDAIPDRSVVSWNALFS-CYVH 88


>ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score =  114 bits (285), Expect = 8e-24
 Identities = 62/105 (59%), Positives = 69/105 (65%)
 Frame = -3

Query: 318 VDLFKGMVDGEVRPNEFSLSIILNACAGLRDGGLARTVXXXXXXXXXXLDQFSANALVDM 139
           V L   M+   + PNEFSLS +LNACAGL D      V           D FSANAL+DM
Sbjct: 173 VALVTEMISTGISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDM 232

Query: 138 YAKAGGIEDAVSVFREIKHPDIVSWNAVIAGCVLHECNDLALILL 4
           YAK+G  E A++VF EI  PDIVSWNAVIAGCVLHE NDLAL LL
Sbjct: 233 YAKSGCPEAAIAVFYEIPKPDIVSWNAVIAGCVLHEKNDLALKLL 277



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 36/97 (37%), Positives = 53/97 (54%)
 Frame = -3

Query: 324 EAVDLFKGMVDGEVRPNEFSLSIILNACAGLRDGGLARTVXXXXXXXXXXLDQFSANALV 145
           EA+ ++  M D +++P+ F  S + NACA L      + +           D F+ N+LV
Sbjct: 474 EALKMYLRMQDRDIKPDAFIFSSLFNACANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLV 533

Query: 144 DMYAKAGGIEDAVSVFREIKHPDIVSWNAVIAGCVLH 34
           +MYAK G I+DA  +F EI    IVSW+A+I G   H
Sbjct: 534 NMYAKCGSIDDASCIFNEISWRGIVSWSAMIGGLAQH 570



 Score = 54.3 bits (129), Expect = 1e-05
 Identities = 31/92 (33%), Positives = 46/92 (50%)
 Frame = -3

Query: 321 AVDLFKGMVDGEVRPNEFSLSIILNACAGLRDGGLARTVXXXXXXXXXXLDQFSANALVD 142
           A+ L   M    V P+ F+LS  L ACA +    L R +           D F    L+D
Sbjct: 273 ALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSFVGVGLID 332

Query: 141 MYAKAGGIEDAVSVFREIKHPDIVSWNAVIAG 46
           MY+K G ++DA  VF  +   D++ WN++I+G
Sbjct: 333 MYSKCGLLQDARMVFDLMPXKDVIVWNSIISG 364