BLASTX nr result

ID: Glycyrrhiza23_contig00035046 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00035046
         (251 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003553062.1| PREDICTED: pentatricopeptide repeat-containi...   116   2e-24
emb|CBI22241.3| unnamed protein product [Vitis vinifera]               74   1e-11
ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containi...    74   1e-11
ref|XP_004139757.1| PREDICTED: pentatricopeptide repeat-containi...    69   4e-10
ref|XP_002533116.1| pentatricopeptide repeat-containing protein,...    69   4e-10

>ref|XP_003553062.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like
            [Glycine max]
          Length = 1186

 Score =  116 bits (291), Expect = 2e-24
 Identities = 54/71 (76%), Positives = 63/71 (88%)
 Frame = +2

Query: 2    DDELCSMLIQGHCQANDLRKVGELLGVAIRKSWELSLSSYRYLVRMMCMKGRVVFSLSLK 181
            DDELC+++IQGHC  NDLRKVGELLG AIRK WELSL+SY+ LVR++C KGRV F+LSLK
Sbjct: 796  DDELCNIIIQGHCHVNDLRKVGELLGFAIRKDWELSLTSYKNLVRLVCRKGRVQFALSLK 855

Query: 182  DLMLAQCSLDG 214
            +LMLAQC LDG
Sbjct: 856  NLMLAQCPLDG 866


>emb|CBI22241.3| unnamed protein product [Vitis vinifera]
          Length = 1256

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/66 (53%), Positives = 49/66 (74%)
 Frame = +2

Query: 2    DDELCSMLIQGHCQANDLRKVGELLGVAIRKSWELSLSSYRYLVRMMCMKGRVVFSLSLK 181
            D E+C+ML+ G+CQAN +RKV EL+GV IRK    S+S YR +VR++CM G V+  L +K
Sbjct: 863  DIEICNMLVFGYCQANSVRKVTELIGVMIRKDLGFSISVYRNVVRLLCMNGMVLPLLRMK 922

Query: 182  DLMLAQ 199
            +LML +
Sbjct: 923  ELMLRE 928


>ref|XP_002278558.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like
            [Vitis vinifera]
          Length = 1273

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 35/66 (53%), Positives = 49/66 (74%)
 Frame = +2

Query: 2    DDELCSMLIQGHCQANDLRKVGELLGVAIRKSWELSLSSYRYLVRMMCMKGRVVFSLSLK 181
            D E+C+ML+ G+CQAN +RKV EL+GV IRK    S+S YR +VR++CM G V+  L +K
Sbjct: 880  DIEICNMLVFGYCQANSVRKVTELIGVMIRKDLGFSISVYRNVVRLLCMNGMVLPLLRMK 939

Query: 182  DLMLAQ 199
            +LML +
Sbjct: 940  ELMLRE 945


>ref|XP_004139757.1| PREDICTED: pentatricopeptide repeat-containing protein At5g15280-like
            [Cucumis sativus]
          Length = 1246

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 32/64 (50%), Positives = 46/64 (71%)
 Frame = +2

Query: 2    DDELCSMLIQGHCQANDLRKVGELLGVAIRKSWELSLSSYRYLVRMMCMKGRVVFSLSLK 181
            D E+ + L+QGHC+  +  KV ELLG+ +RK + LS+ SY+ LV  MCM+GR + +L +K
Sbjct: 851  DAEIYNNLVQGHCKVKNFDKVRELLGIIVRKDFSLSMPSYKKLVCFMCMEGRSLQALHIK 910

Query: 182  DLML 193
            DLML
Sbjct: 911  DLML 914


>ref|XP_002533116.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223527079|gb|EEF29261.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1204

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 37/70 (52%), Positives = 46/70 (65%)
 Frame = +2

Query: 2    DDELCSMLIQGHCQANDLRKVGELLGVAIRKSWELSLSSYRYLVRMMCMKGRVVFSLSLK 181
            D E+ +ML QG+CQAN+ +KV ELL V IRK    S+SSY+ L R+MCM G    +LSLK
Sbjct: 801  DAEIYNMLFQGYCQANNWKKVRELLSVLIRKFLSPSVSSYQNLARLMCMHGSFTSALSLK 860

Query: 182  DLMLAQCSLD 211
             LML     D
Sbjct: 861  VLMLENSRYD 870


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