BLASTX nr result

ID: Glycyrrhiza23_contig00035041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00035041
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541593.1| PREDICTED: pentatricopeptide repeat-containi...    94   1e-17
gb|ACU21279.1| unknown [Glycine max]                                   89   4e-16
ref|XP_002332091.1| predicted protein [Populus trichocarpa] gi|2...    65   6e-09

>ref|XP_003541593.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Glycine max]
          Length = 577

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 44/55 (80%), Positives = 48/55 (87%)
 Frame = +3

Query: 6   LKAAEELYAKILKSGLLTDHVPVQILFNMYCKLEEPVVAFNFYQDWLANKWDS*P 170
           +K AEELYAKILKSGLL DHVPVQILFN YCKL+EPV+AFNFYQDWL +K  S P
Sbjct: 523 MKEAEELYAKILKSGLLNDHVPVQILFNKYCKLKEPVIAFNFYQDWLESKKGSLP 577


>gb|ACU21279.1| unknown [Glycine max]
          Length = 112

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 41/50 (82%), Positives = 44/50 (88%)
 Frame = +3

Query: 6   LKAAEELYAKILKSGLLTDHVPVQILFNMYCKLEEPVVAFNFYQDWLANK 155
           +K AEELYAKILKSGLL DHVPVQI+FN YCKLEEPV AF FYQDWL +K
Sbjct: 61  MKEAEELYAKILKSGLLNDHVPVQIIFNKYCKLEEPVRAFKFYQDWLESK 110


>ref|XP_002332091.1| predicted protein [Populus trichocarpa] gi|222874911|gb|EEF12042.1|
           predicted protein [Populus trichocarpa]
          Length = 521

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 30/46 (65%), Positives = 34/46 (73%)
 Frame = +3

Query: 9   KAAEELYAKILKSGLLTDHVPVQILFNMYCKLEEPVVAFNFYQDWL 146
           K AEEL AK+LKSGLL DHVP QIL   YCK++EP  AF  Y+ WL
Sbjct: 455 KEAEELLAKLLKSGLLIDHVPFQILIKQYCKMKEPDRAFQLYRKWL 500


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